data_7M3Q # _model_server_result.job_id nGWhJ15b9oeZgtn-3BrxLw _model_server_result.datetime_utc '2024-12-22 01:33:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":804}' # _entry.id 7M3Q # _exptl.entry_id 7M3Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.607 _cell.angle_gamma 90 _cell.entry_id 7M3Q _cell.length_a 201.53 _cell.length_b 72.068 _cell.length_c 48.813 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N CYS 355 A CYS 716 1_555 M S4 DTT . A DTT 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.637 ? metalc ? metalc1 A OE2 GLU 35 A GLU 396 1_555 E NA NA . A NA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc2 F NA NA . A NA 804 1_555 O O HOH . A HOH 952 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7M3Q _atom_sites.fract_transf_matrix[1][1] 0.004962 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0004 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013876 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020553 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 801 801 SO4 SO4 . D 3 SO4 A 1 802 802 SO4 SO4 . E 4 NA A 1 803 803 NA NA . F 4 NA A 1 804 804 NA NA . G 5 CL A 1 805 805 CL CL . H 5 CL A 1 806 806 CL CL . I 5 CL A 1 807 807 CL CL . J 5 CL A 1 808 808 CL CL . K 5 CL A 1 809 809 CL CL . L 5 CL A 1 810 810 CL CL . M 6 DTT A 1 811 811 DTT DTT . N 7 EDO A 1 812 812 EDO EDO . O 8 HOH A 1 901 901 HOH HOH . O 8 HOH A 2 902 902 HOH HOH . O 8 HOH A 3 903 903 HOH HOH . O 8 HOH A 4 904 904 HOH HOH . O 8 HOH A 5 905 905 HOH HOH . O 8 HOH A 6 906 906 HOH HOH . O 8 HOH A 7 907 907 HOH HOH . O 8 HOH A 8 908 908 HOH HOH . O 8 HOH A 9 909 909 HOH HOH . O 8 HOH A 10 910 910 HOH HOH . O 8 HOH A 11 911 911 HOH HOH . O 8 HOH A 12 912 912 HOH HOH . O 8 HOH A 13 913 913 HOH HOH . O 8 HOH A 14 914 914 HOH HOH . O 8 HOH A 15 915 915 HOH HOH . O 8 HOH A 16 916 916 HOH HOH . O 8 HOH A 17 917 917 HOH HOH . O 8 HOH A 18 918 918 HOH HOH . O 8 HOH A 19 919 919 HOH HOH . O 8 HOH A 20 920 920 HOH HOH . O 8 HOH A 21 921 921 HOH HOH . O 8 HOH A 22 922 922 HOH HOH . O 8 HOH A 23 923 923 HOH HOH . O 8 HOH A 24 924 924 HOH HOH . O 8 HOH A 25 925 925 HOH HOH . O 8 HOH A 26 926 926 HOH HOH . O 8 HOH A 27 927 927 HOH HOH . O 8 HOH A 28 928 928 HOH HOH . O 8 HOH A 29 929 929 HOH HOH . O 8 HOH A 30 930 930 HOH HOH . O 8 HOH A 31 931 931 HOH HOH . O 8 HOH A 32 932 932 HOH HOH . O 8 HOH A 33 933 933 HOH HOH . O 8 HOH A 34 934 934 HOH HOH . O 8 HOH A 35 935 935 HOH HOH . O 8 HOH A 36 936 936 HOH HOH . O 8 HOH A 37 937 937 HOH HOH . O 8 HOH A 38 938 938 HOH HOH . O 8 HOH A 39 939 939 HOH HOH . O 8 HOH A 40 940 940 HOH HOH . O 8 HOH A 41 941 941 HOH HOH . O 8 HOH A 42 942 942 HOH HOH . O 8 HOH A 43 943 943 HOH HOH . O 8 HOH A 44 944 944 HOH HOH . O 8 HOH A 45 945 945 HOH HOH . O 8 HOH A 46 946 946 HOH HOH . O 8 HOH A 47 947 947 HOH HOH . O 8 HOH A 48 948 949 HOH HOH . O 8 HOH A 49 949 950 HOH HOH . O 8 HOH A 50 950 951 HOH HOH . O 8 HOH A 51 951 952 HOH HOH . O 8 HOH A 52 952 953 HOH HOH . O 8 HOH A 53 953 954 HOH HOH . O 8 HOH A 54 954 955 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 43.734 _atom_site.Cartn_y -4.313 _atom_site.Cartn_z 4.004 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 804 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #