data_7M4P # _model_server_result.job_id HArOMDG5HEZfSYR27vWNyA _model_server_result.datetime_utc '2024-11-22 18:01:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m4p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1103}' # _entry.id 7M4P # _exptl.entry_id 7M4P _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 748.065 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-Distearoyl-sn-glycerophosphoethanolamine _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7M4P _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C41 H82 N O8 P' _chem_comp.formula_weight 748.065 _chem_comp.id 3PE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Distearoyl-sn-glycerophosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLETHANOLAMINE;1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O11 3PE sing 1 n n P O12 3PE sing 2 n n P O13 3PE sing 3 n n P O14 3PE doub 4 n n N C12 3PE sing 5 n n N HN1 3PE sing 6 n n N HN2 3PE sing 7 n n O11 C1 3PE sing 8 n n O13 C11 3PE sing 9 n n C11 C12 3PE sing 10 n n C11 H111 3PE sing 11 n n C11 H112 3PE sing 12 n n C12 H121 3PE sing 13 n n C12 H122 3PE sing 14 n n C1 C2 3PE sing 15 n n C1 H11 3PE sing 16 n n C1 H12 3PE sing 17 n n C2 C3 3PE sing 18 n n C2 O21 3PE sing 19 n n C2 H2 3PE sing 20 n n C3 O31 3PE sing 21 n n C3 H31 3PE sing 22 n n C3 H32 3PE sing 23 n n O31 C31 3PE sing 24 n n O32 C31 3PE doub 25 n n C31 C32 3PE sing 26 n n C32 C33 3PE sing 27 n n C32 H321 3PE sing 28 n n C32 H322 3PE sing 29 n n C33 C34 3PE sing 30 n n C33 H331 3PE sing 31 n n C33 H332 3PE sing 32 n n C34 C35 3PE sing 33 n n C34 H341 3PE sing 34 n n C34 H342 3PE sing 35 n n C35 C36 3PE sing 36 n n C35 H351 3PE sing 37 n n C35 H352 3PE sing 38 n n C36 C37 3PE sing 39 n n C36 H361 3PE sing 40 n n C36 H362 3PE sing 41 n n C37 C38 3PE sing 42 n n C37 H371 3PE sing 43 n n C37 H372 3PE sing 44 n n C38 C39 3PE sing 45 n n C38 H381 3PE sing 46 n n C38 H382 3PE sing 47 n n C39 C3A 3PE sing 48 n n C39 H391 3PE sing 49 n n C39 H392 3PE sing 50 n n C3A C3B 3PE sing 51 n n C3A H3A1 3PE sing 52 n n C3A H3A2 3PE sing 53 n n C3B C3C 3PE sing 54 n n C3B H3B1 3PE sing 55 n n C3B H3B2 3PE sing 56 n n C3C C3D 3PE sing 57 n n C3C H3C1 3PE sing 58 n n C3C H3C2 3PE sing 59 n n C3D C3E 3PE sing 60 n n C3D H3D1 3PE sing 61 n n C3D H3D2 3PE sing 62 n n C3E C3F 3PE sing 63 n n C3E H3E1 3PE sing 64 n n C3E H3E2 3PE sing 65 n n C3F C3G 3PE sing 66 n n C3F H3F1 3PE sing 67 n n C3F H3F2 3PE sing 68 n n C3G C3H 3PE sing 69 n n C3G H3G1 3PE sing 70 n n C3G H3G2 3PE sing 71 n n C3H C3I 3PE sing 72 n n C3H H3H1 3PE sing 73 n n C3H H3H2 3PE sing 74 n n C3I H3I1 3PE sing 75 n n C3I H3I2 3PE sing 76 n n C3I H3I3 3PE sing 77 n n O21 C21 3PE sing 78 n n O22 C21 3PE doub 79 n n C21 C22 3PE sing 80 n n C22 C23 3PE sing 81 n n C22 H221 3PE sing 82 n n C22 H222 3PE sing 83 n n C23 C24 3PE sing 84 n n C23 H231 3PE sing 85 n n C23 H232 3PE sing 86 n n C24 C25 3PE sing 87 n n C24 H241 3PE sing 88 n n C24 H242 3PE sing 89 n n C25 C26 3PE sing 90 n n C25 H251 3PE sing 91 n n C25 H252 3PE sing 92 n n C26 C27 3PE sing 93 n n C26 H261 3PE sing 94 n n C26 H262 3PE sing 95 n n C27 C28 3PE sing 96 n n C27 H271 3PE sing 97 n n C27 H272 3PE sing 98 n n C28 C29 3PE sing 99 n n C28 H281 3PE sing 100 n n C28 H282 3PE sing 101 n n C29 C2A 3PE sing 102 n n C29 H291 3PE sing 103 n n C29 H292 3PE sing 104 n n C2A C2B 3PE sing 105 n n C2A H2A1 3PE sing 106 n n C2A H2A2 3PE sing 107 n n C2B C2C 3PE sing 108 n n C2B H2B1 3PE sing 109 n n C2B H2B2 3PE sing 110 n n C2C C2D 3PE sing 111 n n C2C H2C1 3PE sing 112 n n C2C H2C2 3PE sing 113 n n C2D C2E 3PE sing 114 n n C2D H2D1 3PE sing 115 n n C2D H2D2 3PE sing 116 n n C2E C2F 3PE sing 117 n n C2E H2E1 3PE sing 118 n n C2E H2E2 3PE sing 119 n n C2F C2G 3PE sing 120 n n C2F H2F1 3PE sing 121 n n C2F H2F2 3PE sing 122 n n C2G C2H 3PE sing 123 n n C2G H2G1 3PE sing 124 n n C2G H2G2 3PE sing 125 n n C2H C2I 3PE sing 126 n n C2H H2H1 3PE sing 127 n n C2H H2H2 3PE sing 128 n n C2I H2I1 3PE sing 129 n n C2I H2I2 3PE sing 130 n n C2I H2I3 3PE sing 131 n n O12 H1 3PE sing 132 n n # _atom_sites.entry_id 7M4P _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 3PE A 1 1101 5 3PE 3PE . E 2 3PE B 1 1101 1 3PE 3PE . F 2 3PE B 1 1102 2 3PE 3PE . G 2 3PE B 1 1103 3 3PE 3PE . H 2 3PE B 1 1104 7 3PE 3PE . I 3 YQM B 1 1105 1 YQM ERA . J 2 3PE C 1 1101 4 3PE 3PE . K 2 3PE C 1 1102 6 3PE 3PE . L 2 3PE C 1 1103 8 3PE 3PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 3PE . . . G 2 223.007 184.294 157.345 1 20 ? P 3PE 1103 B 1 HETATM 2 N N 3PE . . . G 2 224.498 179.785 155.932 1 20 ? N 3PE 1103 B 1 HETATM 3 O O11 3PE . . . G 2 222.29 184.474 158.822 1 20 ? O11 3PE 1103 B 1 HETATM 4 O O12 3PE . . . G 2 221.962 184.059 156.282 1 20 ? O12 3PE 1103 B 1 HETATM 5 O O13 3PE . . . G 2 224.059 183.029 157.364 1 20 ? O13 3PE 1103 B 1 HETATM 6 O O14 3PE . . . G 2 223.762 185.557 157.014 1 20 ? O14 3PE 1103 B 1 HETATM 7 C C11 3PE . . . G 2 223.587 181.757 157.028 1 20 ? C11 3PE 1103 B 1 HETATM 8 C C12 3PE . . . G 2 224.359 181.225 155.823 1 20 ? C12 3PE 1103 B 1 HETATM 9 C C1 3PE . . . G 2 222.328 183.453 159.777 1 20 ? C1 3PE 1103 B 1 HETATM 10 C C2 3PE . . . G 2 223.305 183.824 160.888 1 20 ? C2 3PE 1103 B 1 HETATM 11 C C3 3PE . . . G 2 224.243 184.914 160.388 1 20 ? C3 3PE 1103 B 1 HETATM 12 O O31 3PE . . . G 2 225.253 185.109 161.331 1 20 ? O31 3PE 1103 B 1 HETATM 13 O O32 3PE . . . G 2 226.25 186.375 159.778 1 20 ? O32 3PE 1103 B 1 HETATM 14 C C31 3PE . . . G 2 226.322 185.86 160.842 1 20 ? C31 3PE 1103 B 1 HETATM 15 C C32 3PE . . . G 2 227.581 186.013 161.69 1 20 ? C32 3PE 1103 B 1 HETATM 16 C C33 3PE . . . G 2 227.191 185.889 163.16 1 20 ? C33 3PE 1103 B 1 HETATM 17 C C34 3PE . . . G 2 228.383 186.258 164.039 1 20 ? C34 3PE 1103 B 1 HETATM 18 C C35 3PE . . . G 2 227.89 186.613 165.438 1 20 ? C35 3PE 1103 B 1 HETATM 19 C C36 3PE . . . G 2 228.949 187.445 166.154 1 20 ? C36 3PE 1103 B 1 HETATM 20 O O21 3PE . . . G 2 222.632 184.292 162.023 1 20 ? O21 3PE 1103 B 1 HETATM 21 O O22 3PE . . . G 2 224.162 183.284 163.328 1 20 ? O22 3PE 1103 B 1 HETATM 22 C C21 3PE . . . G 2 223.344 184.127 163.218 1 20 ? C21 3PE 1103 B 1 HETATM 23 C C22 3PE . . . G 2 223.078 185.035 164.406 1 20 ? C22 3PE 1103 B 1 HETATM 24 C C23 3PE . . . G 2 224.022 184.681 165.547 1 20 ? C23 3PE 1103 B 1 HETATM 25 C C24 3PE . . . G 2 223.55 185.417 166.795 1 20 ? C24 3PE 1103 B 1 HETATM 26 C C25 3PE . . . G 2 224.601 185.297 167.889 1 20 ? C25 3PE 1103 B 1 HETATM 27 C C26 3PE . . . G 2 224.153 186.083 169.115 1 20 ? C26 3PE 1103 B 1 HETATM 28 C C27 3PE . . . G 2 225.159 185.87 170.241 1 20 ? C27 3PE 1103 B 1 HETATM 29 C C28 3PE . . . G 2 224.854 186.828 171.389 1 20 ? C28 3PE 1103 B 1 HETATM 30 H HN1 3PE . . . G 2 224.743 179.58 156.731 1 20 ? HN1 3PE 1103 B 1 HETATM 31 H HN2 3PE . . . G 2 223.743 179.412 155.759 1 20 ? HN2 3PE 1103 B 1 HETATM 32 H H111 3PE . . . G 2 222.643 181.807 156.809 1 20 ? H111 3PE 1103 B 1 HETATM 33 H H112 3PE . . . G 2 223.712 181.158 157.78 1 20 ? H112 3PE 1103 B 1 HETATM 34 H H121 3PE . . . G 2 223.876 181.44 155.01 1 20 ? H121 3PE 1103 B 1 HETATM 35 H H122 3PE . . . G 2 225.238 181.634 155.794 1 20 ? H122 3PE 1103 B 1 HETATM 36 H H11 3PE . . . G 2 221.443 183.335 160.156 1 20 ? H11 3PE 1103 B 1 HETATM 37 H H12 3PE . . . G 2 222.614 182.625 159.36 1 20 ? H12 3PE 1103 B 1 HETATM 38 H H2 3PE . . . G 2 223.825 183.037 161.112 1 20 ? H2 3PE 1103 B 1 HETATM 39 H H31 3PE . . . G 2 223.747 185.739 160.27 1 20 ? H31 3PE 1103 B 1 HETATM 40 H H32 3PE . . . G 2 224.636 184.642 159.544 1 20 ? H32 3PE 1103 B 1 HETATM 41 H H321 3PE . . . G 2 227.981 186.882 161.527 1 20 ? H321 3PE 1103 B 1 HETATM 42 H H322 3PE . . . G 2 228.214 185.315 161.46 1 20 ? H322 3PE 1103 B 1 HETATM 43 H H331 3PE . . . G 2 226.923 184.975 163.346 1 20 ? H331 3PE 1103 B 1 HETATM 44 H H332 3PE . . . G 2 226.45 186.487 163.346 1 20 ? H332 3PE 1103 B 1 HETATM 45 H H341 3PE . . . G 2 228.846 187.019 163.655 1 20 ? H341 3PE 1103 B 1 HETATM 46 H H342 3PE . . . G 2 228.991 185.504 164.091 1 20 ? H342 3PE 1103 B 1 HETATM 47 H H351 3PE . . . G 2 227.727 185.798 165.938 1 20 ? H351 3PE 1103 B 1 HETATM 48 H H352 3PE . . . G 2 227.067 187.123 165.375 1 20 ? H352 3PE 1103 B 1 HETATM 49 H H362 3PE . . . G 2 229.818 187.272 165.758 1 20 ? H362 3PE 1103 B 1 HETATM 50 H H221 3PE . . . G 2 222.161 184.92 164.699 1 20 ? H221 3PE 1103 B 1 HETATM 51 H H222 3PE . . . G 2 223.22 185.958 164.145 1 20 ? H222 3PE 1103 B 1 HETATM 52 H H231 3PE . . . G 2 224.925 184.956 165.323 1 20 ? H231 3PE 1103 B 1 HETATM 53 H H232 3PE . . . G 2 224.001 183.724 165.706 1 20 ? H232 3PE 1103 B 1 HETATM 54 H H241 3PE . . . G 2 222.717 185.028 167.104 1 20 ? H241 3PE 1103 B 1 HETATM 55 H H242 3PE . . . G 2 223.41 186.353 166.583 1 20 ? H242 3PE 1103 B 1 HETATM 56 H H251 3PE . . . G 2 225.444 185.653 167.567 1 20 ? H251 3PE 1103 B 1 HETATM 57 H H252 3PE . . . G 2 224.714 184.363 168.127 1 20 ? H252 3PE 1103 B 1 HETATM 58 H H261 3PE . . . G 2 223.279 185.772 169.398 1 20 ? H261 3PE 1103 B 1 HETATM 59 H H262 3PE . . . G 2 224.106 187.027 168.895 1 20 ? H262 3PE 1103 B 1 HETATM 60 H H271 3PE . . . G 2 225.099 184.956 170.559 1 20 ? H271 3PE 1103 B 1 HETATM 61 H H272 3PE . . . G 2 226.055 186.038 169.909 1 20 ? H272 3PE 1103 B 1 HETATM 62 H H281 3PE . . . G 2 225.567 187.482 171.462 1 20 ? H281 3PE 1103 B 1 HETATM 63 H H282 3PE . . . G 2 224.015 187.283 171.216 1 20 ? H282 3PE 1103 B 1 HETATM 64 H HN3 3PE . . . G 2 225.089 179.511 155.371 1 20 ? HN3 3PE 1103 B 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 63 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 64 #