data_7M5M # _model_server_result.job_id 9849j1flJp-zVz86kK2TcQ _model_server_result.datetime_utc '2024-11-25 00:19:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m5m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":15}' # _entry.id 7M5M # _exptl.entry_id 7M5M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.122 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-BUTANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7M5M _cell.length_a 83.579 _cell.length_b 83.579 _cell.length_c 187.494 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M5M _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_564 x-y,-y+1,-z-1/3 1 0 0 0 -1 0 0 0 -1 -41.7895 72.381537 -62.498 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D SG CYS 4 D CYS 4 1_555 F C1 NBU . D NBU 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? covale ? covale2 D SG CYS 8 D CYS 8 1_555 F C4 NBU . D NBU 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? covale ? covale3 E SG CYS 4 E CYS 4 1_555 G C1 NBU . E NBU 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale4 E SG CYS 8 E CYS 8 1_555 G C4 NBU . E NBU 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? # _chem_comp.formula 'C4 H10' _chem_comp.formula_weight 58.122 _chem_comp.id NBU _chem_comp.mon_nstd_flag . _chem_comp.name N-BUTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NBU sing 241 n n C1 H11 NBU sing 242 n n C1 H12 NBU sing 243 n n C1 H13 NBU sing 244 n n C2 C3 NBU sing 245 n n C2 H21 NBU sing 246 n n C2 H22 NBU sing 247 n n C3 C4 NBU sing 248 n n C3 H31 NBU sing 249 n n C3 H32 NBU sing 250 n n C4 H41 NBU sing 251 n n C4 H42 NBU sing 252 n n C4 H43 NBU sing 253 n n # _atom_sites.entry_id 7M5M _atom_sites.fract_transf_matrix[1][1] 0.011965 _atom_sites.fract_transf_matrix[1][2] 0.006908 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013816 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 NBU D 1 15 301 NBU LIG . G 3 NBU E 1 15 301 NBU LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NBU . . . F 3 41.365 20.234 -31.318 1 101.28 ? C1 NBU 15 D 1 HETATM 2 C C2 NBU . . . F 3 41.602 18.697 -31.517 1 107.14 ? C2 NBU 15 D 1 HETATM 3 C C3 NBU . . . F 3 40.732 17.992 -32.266 1 104.05 ? C3 NBU 15 D 1 HETATM 4 C C4 NBU . . . F 3 40.929 16.441 -32.496 1 100.42 ? C4 NBU 15 D 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #