data_7M5Y # _model_server_result.job_id YfnHluNVJqCCZ39W275F0Q _model_server_result.datetime_utc '2024-11-21 14:26:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m5y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":1215}' # _entry.id 7M5Y # _exptl.entry_id 7M5Y _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 198.388 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRADECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7M5Y _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M5Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 1033 A ASN 1033 1_555 W C1 NAG . A NAG 1222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? metalc ? metalc1 A OD2 ASP 513 A ASP 513 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc2 A OD1 ASP 513 A ASP 513 1_555 C MG MF4 . A MF4 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.94 ? metalc ? metalc3 A O THR 515 A THR 515 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc4 A OD1 ASP 878 A ASP 878 1_555 B MG MG . A MG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? # _chem_comp.formula 'C14 H30' _chem_comp.formula_weight 198.388 _chem_comp.id C14 _chem_comp.mon_nstd_flag . _chem_comp.name TETRADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 C14 sing 70 n n C01 H011 C14 sing 71 n n C01 H012 C14 sing 72 n n C01 H013 C14 sing 73 n n C02 C03 C14 sing 74 n n C02 H021 C14 sing 75 n n C02 H022 C14 sing 76 n n C03 C04 C14 sing 77 n n C03 H031 C14 sing 78 n n C03 H032 C14 sing 79 n n C04 C05 C14 sing 80 n n C04 H041 C14 sing 81 n n C04 H042 C14 sing 82 n n C05 C06 C14 sing 83 n n C05 H051 C14 sing 84 n n C05 H052 C14 sing 85 n n C06 C07 C14 sing 86 n n C06 H061 C14 sing 87 n n C06 H062 C14 sing 88 n n C07 C08 C14 sing 89 n n C07 H071 C14 sing 90 n n C07 H072 C14 sing 91 n n C08 C09 C14 sing 92 n n C08 H081 C14 sing 93 n n C08 H082 C14 sing 94 n n C09 C10 C14 sing 95 n n C09 H091 C14 sing 96 n n C09 H092 C14 sing 97 n n C10 C11 C14 sing 98 n n C10 H101 C14 sing 99 n n C10 H102 C14 sing 100 n n C11 C12 C14 sing 101 n n C11 H111 C14 sing 102 n n C11 H112 C14 sing 103 n n C12 C13 C14 sing 104 n n C12 H121 C14 sing 105 n n C12 H122 C14 sing 106 n n C13 C14 C14 sing 107 n n C13 H131 C14 sing 108 n n C13 H132 C14 sing 109 n n C14 H141 C14 sing 110 n n C14 H142 C14 sing 111 n n C14 H143 C14 sing 112 n n # _atom_sites.entry_id 7M5Y _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1201 1201 MG MG . C 3 MF4 A 1 1202 1202 MF4 MF4 . D 4 Y01 A 1 1203 1203 Y01 Y01 . E 5 LMT A 1 1204 1204 LMT LMT . F 4 Y01 A 1 1205 1205 Y01 Y01 . G 6 CLR A 1 1206 1206 CLR CLR . H 6 CLR A 1 1207 1207 CLR CLR . I 4 Y01 A 1 1208 1208 Y01 Y01 . J 7 D10 A 1 1209 1209 D10 D10 . K 7 D10 A 1 1210 1210 D10 D10 . L 7 D10 A 1 1211 1211 D10 D10 . M 7 D10 A 1 1212 1212 D10 D10 . N 7 D10 A 1 1213 1213 D10 D10 . O 7 D10 A 1 1214 1214 D10 D10 . P 8 C14 A 1 1215 1215 C14 C14 . Q 9 D12 A 1 1216 1216 D12 D12 . R 7 D10 A 1 1217 1217 D10 D10 . S 7 D10 A 1 1218 1218 D10 D10 . T 7 D10 A 1 1219 1219 D10 D10 . U 6 CLR A 1 1220 1220 CLR CLR . V 6 CLR A 1 1221 1221 CLR CLR . W 10 NAG A 1 1222 1222 NAG NAG . X 11 SPK A 1 1223 1223 SPK SPK . Y 12 EUJ A 1 1224 1224 EUJ EUJ . Z 13 HOH A 1 1301 1301 HOH HOH . Z 13 HOH A 2 1302 1302 HOH HOH . Z 13 HOH A 3 1303 1303 HOH HOH . Z 13 HOH A 4 1304 1304 HOH HOH . Z 13 HOH A 5 1305 1305 HOH HOH . Z 13 HOH A 6 1306 1306 HOH HOH . Z 13 HOH A 7 1307 1307 HOH HOH . Z 13 HOH A 8 1308 1308 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 C14 . . . P 8 182.467 156.041 187.183 1 82.97 ? C01 C14 1215 A 1 HETATM 2 C C02 C14 . . . P 8 181.893 154.865 186.41 1 82.97 ? C02 C14 1215 A 1 HETATM 3 C C03 C14 . . . P 8 180.66 155.303 185.621 1 82.97 ? C03 C14 1215 A 1 HETATM 4 C C04 C14 . . . P 8 180.525 154.605 184.257 1 82.97 ? C04 C14 1215 A 1 HETATM 5 C C05 C14 . . . P 8 180.523 153.083 184.441 1 82.97 ? C05 C14 1215 A 1 HETATM 6 C C06 C14 . . . P 8 179.93 152.405 183.204 1 82.97 ? C06 C14 1215 A 1 HETATM 7 C C07 C14 . . . P 8 178.398 152.47 183.224 1 82.97 ? C07 C14 1215 A 1 HETATM 8 C C08 C14 . . . P 8 177.792 151.1 182.99 1 82.97 ? C08 C14 1215 A 1 HETATM 9 C C09 C14 . . . P 8 176.27 151.222 182.984 1 82.97 ? C09 C14 1215 A 1 HETATM 10 C C10 C14 . . . P 8 175.625 149.887 182.635 1 82.97 ? C10 C14 1215 A 1 HETATM 11 C C11 C14 . . . P 8 174.184 150.092 182.183 1 82.97 ? C11 C14 1215 A 1 HETATM 12 C C12 C14 . . . P 8 173.436 148.761 182.223 1 82.97 ? C12 C14 1215 A 1 HETATM 13 C C13 C14 . . . P 8 172.232 148.802 181.296 1 82.97 ? C13 C14 1215 A 1 HETATM 14 C C14 C14 . . . P 8 171.479 147.486 181.359 1 82.97 ? C14 C14 1215 A 1 HETATM 15 H H011 C14 . . . P 8 182.784 156.856 186.52 1 82.97 ? H011 C14 1215 A 1 HETATM 16 H H012 C14 . . . P 8 183.35 155.757 187.771 1 82.97 ? H012 C14 1215 A 1 HETATM 17 H H013 C14 . . . P 8 181.743 156.471 187.887 1 82.97 ? H013 C14 1215 A 1 HETATM 18 H H021 C14 . . . P 8 181.666 154.035 187.109 1 82.97 ? H021 C14 1215 A 1 HETATM 19 H H022 C14 . . . P 8 182.66 154.441 185.735 1 82.97 ? H022 C14 1215 A 1 HETATM 20 H H031 C14 . . . P 8 180.665 156.402 185.474 1 82.97 ? H031 C14 1215 A 1 HETATM 21 H H032 C14 . . . P 8 179.74 155.139 186.221 1 82.97 ? H032 C14 1215 A 1 HETATM 22 H H041 C14 . . . P 8 181.344 154.897 183.57 1 82.97 ? H041 C14 1215 A 1 HETATM 23 H H042 C14 . . . P 8 179.612 154.947 183.736 1 82.97 ? H042 C14 1215 A 1 HETATM 24 H H051 C14 . . . P 8 179.975 152.795 185.342 1 82.97 ? H051 C14 1215 A 1 HETATM 25 H H052 C14 . . . P 8 181.549 152.707 184.625 1 82.97 ? H052 C14 1215 A 1 HETATM 26 H H061 C14 . . . P 8 180.257 151.348 183.124 1 82.97 ? H061 C14 1215 A 1 HETATM 27 H H062 C14 . . . P 8 180.346 152.879 182.29 1 82.97 ? H062 C14 1215 A 1 HETATM 28 H H071 C14 . . . P 8 178.015 153.169 182.453 1 82.97 ? H071 C14 1215 A 1 HETATM 29 H H072 C14 . . . P 8 178.024 152.906 184.171 1 82.97 ? H072 C14 1215 A 1 HETATM 30 H H081 C14 . . . P 8 178.117 150.372 183.762 1 82.97 ? H081 C14 1215 A 1 HETATM 31 H H082 C14 . . . P 8 178.175 150.679 182.037 1 82.97 ? H082 C14 1215 A 1 HETATM 32 H H091 C14 . . . P 8 175.916 151.999 182.278 1 82.97 ? H091 C14 1215 A 1 HETATM 33 H H092 C14 . . . P 8 175.935 151.604 183.969 1 82.97 ? H092 C14 1215 A 1 HETATM 34 H H101 C14 . . . P 8 175.668 149.19 183.5 1 82.97 ? H101 C14 1215 A 1 HETATM 35 H H102 C14 . . . P 8 176.207 149.361 181.852 1 82.97 ? H102 C14 1215 A 1 HETATM 36 H H111 C14 . . . P 8 174.151 150.541 181.174 1 82.97 ? H111 C14 1215 A 1 HETATM 37 H H112 C14 . . . P 8 173.679 150.853 182.814 1 82.97 ? H112 C14 1215 A 1 HETATM 38 H H121 C14 . . . P 8 173.105 148.512 183.254 1 82.97 ? H121 C14 1215 A 1 HETATM 39 H H122 C14 . . . P 8 174.117 147.929 181.961 1 82.97 ? H122 C14 1215 A 1 HETATM 40 H H131 C14 . . . P 8 172.57 149.027 180.27 1 82.97 ? H131 C14 1215 A 1 HETATM 41 H H132 C14 . . . P 8 171.559 149.643 181.556 1 82.97 ? H132 C14 1215 A 1 HETATM 42 H H141 C14 . . . P 8 170.526 147.521 180.818 1 82.97 ? H141 C14 1215 A 1 HETATM 43 H H142 C14 . . . P 8 171.24 147.196 182.392 1 82.97 ? H142 C14 1215 A 1 HETATM 44 H H143 C14 . . . P 8 172.062 146.662 180.929 1 82.97 ? H143 C14 1215 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 44 #