data_7M6K
#
_model_server_result.job_id            gZVna1YS0BFXkCM5AMWMqA 
_model_server_result.datetime_utc      '2024-10-10 08:23:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7m6k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":702}' 
#
_entry.id    7M6K 
#
_exptl.entry_id    7M6K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         103.492 
_cell.angle_beta          101.784 
_cell.angle_gamma         96.071 
_cell.entry_id            7M6K 
_cell.length_a            39.065 
_cell.length_b            51.01 
_cell.length_c            76.56 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7M6K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,G 1 1 
B,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 31 A CYS 399 1_555 A SG CYS 63 A CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 B SG CYS 31 B CYS 399 1_555 B SG CYS 63 B CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc1 A O ASN 176 A ASN 544 1_555 D NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.043 ? 
metalc ? metalc2 A OD1 ASP 178 A ASP 546 1_555 D NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc3 E NA NA . A NA 703 1_555 G O HOH . A HOH 828 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? 
metalc ? metalc4 E NA NA . A NA 703 1_555 G O HOH . A HOH 831 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.933 ? 
metalc ? metalc5 E NA NA . A NA 703 1_555 H O HOH . B HOH 894 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7M6K 
_atom_sites.fract_transf_matrix[1][1]    0.025598 
_atom_sites.fract_transf_matrix[1][2]    0.002723 
_atom_sites.fract_transf_matrix[1][3]    0.006272 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019715 
_atom_sites.fract_transf_matrix[2][3]    0.005349 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013825 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 YRJ A 1 701 701 YRJ LIG . 
D 3 NA A 1 702 1 NA NA . 
E 3 NA A 1 703 2 NA NA . 
F 2 YRJ B 1 701 701 YRJ LIG . 
G 4 HOH A 1 801 288 HOH HOH . 
G 4 HOH A 2 802 273 HOH HOH . 
G 4 HOH A 3 803 290 HOH HOH . 
G 4 HOH A 4 804 92 HOH HOH . 
G 4 HOH A 5 805 67 HOH HOH . 
G 4 HOH A 6 806 2 HOH HOH . 
G 4 HOH A 7 807 65 HOH HOH . 
G 4 HOH A 8 808 142 HOH HOH . 
G 4 HOH A 9 809 300 HOH HOH . 
G 4 HOH A 10 810 252 HOH HOH . 
G 4 HOH A 11 811 223 HOH HOH . 
G 4 HOH A 12 812 257 HOH HOH . 
G 4 HOH A 13 813 293 HOH HOH . 
G 4 HOH A 14 814 27 HOH HOH . 
G 4 HOH A 15 815 295 HOH HOH . 
G 4 HOH A 16 816 192 HOH HOH . 
G 4 HOH A 17 817 292 HOH HOH . 
G 4 HOH A 18 818 101 HOH HOH . 
G 4 HOH A 19 819 89 HOH HOH . 
G 4 HOH A 20 820 70 HOH HOH . 
G 4 HOH A 21 821 75 HOH HOH . 
G 4 HOH A 22 822 88 HOH HOH . 
G 4 HOH A 23 823 123 HOH HOH . 
G 4 HOH A 24 824 16 HOH HOH . 
G 4 HOH A 25 825 166 HOH HOH . 
G 4 HOH A 26 826 110 HOH HOH . 
G 4 HOH A 27 827 61 HOH HOH . 
G 4 HOH A 28 828 78 HOH HOH . 
G 4 HOH A 29 829 24 HOH HOH . 
G 4 HOH A 30 830 18 HOH HOH . 
G 4 HOH A 31 831 54 HOH HOH . 
G 4 HOH A 32 832 185 HOH HOH . 
G 4 HOH A 33 833 53 HOH HOH . 
G 4 HOH A 34 834 15 HOH HOH . 
G 4 HOH A 35 835 254 HOH HOH . 
G 4 HOH A 36 836 117 HOH HOH . 
G 4 HOH A 37 837 80 HOH HOH . 
G 4 HOH A 38 838 184 HOH HOH . 
G 4 HOH A 39 839 183 HOH HOH . 
G 4 HOH A 40 840 9 HOH HOH . 
G 4 HOH A 41 841 281 HOH HOH . 
G 4 HOH A 42 842 64 HOH HOH . 
G 4 HOH A 43 843 76 HOH HOH . 
G 4 HOH A 44 844 81 HOH HOH . 
G 4 HOH A 45 845 136 HOH HOH . 
G 4 HOH A 46 846 55 HOH HOH . 
G 4 HOH A 47 847 60 HOH HOH . 
G 4 HOH A 48 848 66 HOH HOH . 
G 4 HOH A 49 849 125 HOH HOH . 
G 4 HOH A 50 850 151 HOH HOH . 
G 4 HOH A 51 851 91 HOH HOH . 
G 4 HOH A 52 852 3 HOH HOH . 
G 4 HOH A 53 853 232 HOH HOH . 
G 4 HOH A 54 854 120 HOH HOH . 
G 4 HOH A 55 855 145 HOH HOH . 
G 4 HOH A 56 856 20 HOH HOH . 
G 4 HOH A 57 857 119 HOH HOH . 
G 4 HOH A 58 858 251 HOH HOH . 
G 4 HOH A 59 859 285 HOH HOH . 
G 4 HOH A 60 860 248 HOH HOH . 
G 4 HOH A 61 861 62 HOH HOH . 
G 4 HOH A 62 862 217 HOH HOH . 
G 4 HOH A 63 863 297 HOH HOH . 
G 4 HOH A 64 864 157 HOH HOH . 
G 4 HOH A 65 865 38 HOH HOH . 
G 4 HOH A 66 866 43 HOH HOH . 
G 4 HOH A 67 867 29 HOH HOH . 
G 4 HOH A 68 868 112 HOH HOH . 
G 4 HOH A 69 869 302 HOH HOH . 
G 4 HOH A 70 870 94 HOH HOH . 
G 4 HOH A 71 871 30 HOH HOH . 
G 4 HOH A 72 872 149 HOH HOH . 
G 4 HOH A 73 873 72 HOH HOH . 
G 4 HOH A 74 874 168 HOH HOH . 
G 4 HOH A 75 875 182 HOH HOH . 
G 4 HOH A 76 876 146 HOH HOH . 
G 4 HOH A 77 877 198 HOH HOH . 
G 4 HOH A 78 878 111 HOH HOH . 
G 4 HOH A 79 879 258 HOH HOH . 
G 4 HOH A 80 880 294 HOH HOH . 
G 4 HOH A 81 881 215 HOH HOH . 
G 4 HOH A 82 882 203 HOH HOH . 
G 4 HOH A 83 883 190 HOH HOH . 
G 4 HOH A 84 884 154 HOH HOH . 
G 4 HOH A 85 885 301 HOH HOH . 
G 4 HOH A 86 886 202 HOH HOH . 
G 4 HOH A 87 887 206 HOH HOH . 
G 4 HOH A 88 888 44 HOH HOH . 
G 4 HOH A 89 889 195 HOH HOH . 
G 4 HOH A 90 890 210 HOH HOH . 
G 4 HOH A 91 891 291 HOH HOH . 
G 4 HOH A 92 892 28 HOH HOH . 
G 4 HOH A 93 893 191 HOH HOH . 
H 4 HOH B 1 801 307 HOH HOH . 
H 4 HOH B 2 802 263 HOH HOH . 
H 4 HOH B 3 803 132 HOH HOH . 
H 4 HOH B 4 804 278 HOH HOH . 
H 4 HOH B 5 805 180 HOH HOH . 
H 4 HOH B 6 806 205 HOH HOH . 
H 4 HOH B 7 807 272 HOH HOH . 
H 4 HOH B 8 808 312 HOH HOH . 
H 4 HOH B 9 809 104 HOH HOH . 
H 4 HOH B 10 810 45 HOH HOH . 
H 4 HOH B 11 811 7 HOH HOH . 
H 4 HOH B 12 812 77 HOH HOH . 
H 4 HOH B 13 813 31 HOH HOH . 
H 4 HOH B 14 814 255 HOH HOH . 
H 4 HOH B 15 815 82 HOH HOH . 
H 4 HOH B 16 816 8 HOH HOH . 
H 4 HOH B 17 817 36 HOH HOH . 
H 4 HOH B 18 818 271 HOH HOH . 
H 4 HOH B 19 819 11 HOH HOH . 
H 4 HOH B 20 820 159 HOH HOH . 
H 4 HOH B 21 821 129 HOH HOH . 
H 4 HOH B 22 822 4 HOH HOH . 
H 4 HOH B 23 823 253 HOH HOH . 
H 4 HOH B 24 824 113 HOH HOH . 
H 4 HOH B 25 825 130 HOH HOH . 
H 4 HOH B 26 826 17 HOH HOH . 
H 4 HOH B 27 827 14 HOH HOH . 
H 4 HOH B 28 828 22 HOH HOH . 
H 4 HOH B 29 829 50 HOH HOH . 
H 4 HOH B 30 830 103 HOH HOH . 
H 4 HOH B 31 831 207 HOH HOH . 
H 4 HOH B 32 832 25 HOH HOH . 
H 4 HOH B 33 833 34 HOH HOH . 
H 4 HOH B 34 834 309 HOH HOH . 
H 4 HOH B 35 835 21 HOH HOH . 
H 4 HOH B 36 836 84 HOH HOH . 
H 4 HOH B 37 837 216 HOH HOH . 
H 4 HOH B 38 838 52 HOH HOH . 
H 4 HOH B 39 839 40 HOH HOH . 
H 4 HOH B 40 840 311 HOH HOH . 
H 4 HOH B 41 841 133 HOH HOH . 
H 4 HOH B 42 842 102 HOH HOH . 
H 4 HOH B 43 843 71 HOH HOH . 
H 4 HOH B 44 844 5 HOH HOH . 
H 4 HOH B 45 845 177 HOH HOH . 
H 4 HOH B 46 846 13 HOH HOH . 
H 4 HOH B 47 847 164 HOH HOH . 
H 4 HOH B 48 848 63 HOH HOH . 
H 4 HOH B 49 849 1 HOH HOH . 
H 4 HOH B 50 850 12 HOH HOH . 
H 4 HOH B 51 851 39 HOH HOH . 
H 4 HOH B 52 852 160 HOH HOH . 
H 4 HOH B 53 853 98 HOH HOH . 
H 4 HOH B 54 854 306 HOH HOH . 
H 4 HOH B 55 855 95 HOH HOH . 
H 4 HOH B 56 856 152 HOH HOH . 
H 4 HOH B 57 857 85 HOH HOH . 
H 4 HOH B 58 858 126 HOH HOH . 
H 4 HOH B 59 859 105 HOH HOH . 
H 4 HOH B 60 860 282 HOH HOH . 
H 4 HOH B 61 861 169 HOH HOH . 
H 4 HOH B 62 862 305 HOH HOH . 
H 4 HOH B 63 863 47 HOH HOH . 
H 4 HOH B 64 864 68 HOH HOH . 
H 4 HOH B 65 865 41 HOH HOH . 
H 4 HOH B 66 866 26 HOH HOH . 
H 4 HOH B 67 867 83 HOH HOH . 
H 4 HOH B 68 868 267 HOH HOH . 
H 4 HOH B 69 869 118 HOH HOH . 
H 4 HOH B 70 870 229 HOH HOH . 
H 4 HOH B 71 871 315 HOH HOH . 
H 4 HOH B 72 872 87 HOH HOH . 
H 4 HOH B 73 873 134 HOH HOH . 
H 4 HOH B 74 874 108 HOH HOH . 
H 4 HOH B 75 875 156 HOH HOH . 
H 4 HOH B 76 876 135 HOH HOH . 
H 4 HOH B 77 877 121 HOH HOH . 
H 4 HOH B 78 878 6 HOH HOH . 
H 4 HOH B 79 879 194 HOH HOH . 
H 4 HOH B 80 880 170 HOH HOH . 
H 4 HOH B 81 881 42 HOH HOH . 
H 4 HOH B 82 882 93 HOH HOH . 
H 4 HOH B 83 883 116 HOH HOH . 
H 4 HOH B 84 884 222 HOH HOH . 
H 4 HOH B 85 885 51 HOH HOH . 
H 4 HOH B 86 886 49 HOH HOH . 
H 4 HOH B 87 887 241 HOH HOH . 
H 4 HOH B 88 888 137 HOH HOH . 
H 4 HOH B 89 889 277 HOH HOH . 
H 4 HOH B 90 890 200 HOH HOH . 
H 4 HOH B 91 891 174 HOH HOH . 
H 4 HOH B 92 892 155 HOH HOH . 
H 4 HOH B 93 893 96 HOH HOH . 
H 4 HOH B 94 894 299 HOH HOH . 
H 4 HOH B 95 895 318 HOH HOH . 
H 4 HOH B 96 896 186 HOH HOH . 
H 4 HOH B 97 897 319 HOH HOH . 
H 4 HOH B 98 898 310 HOH HOH . 
H 4 HOH B 99 899 187 HOH HOH . 
H 4 HOH B 100 900 99 HOH HOH . 
H 4 HOH B 101 901 204 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               0.439 
_atom_site.Cartn_y               10.705 
_atom_site.Cartn_z               7.348 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        56.22 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           702 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           260 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#