data_7M7I # _model_server_result.job_id KB_c0b2H7tONWeZU7IhI8Q _model_server_result.datetime_utc '2024-12-11 23:35:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m7i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1601}' # _entry.id 7M7I # _exptl.entry_id 7M7I _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 358.348 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7M7I _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M7I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 24 C CYS 24 1_555 C SG CYS 100 C CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 C SG CYS 147 C CYS 147 1_555 C SG CYS 203 C CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 D SG CYS 39 D CYS 39 1_555 D SG CYS 109 D CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 D SG CYS 156 D CYS 156 1_555 D SG CYS 216 D CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 E SG CYS 24 E CYS 24 1_555 E SG CYS 100 E CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 E SG CYS 147 E CYS 147 1_555 E SG CYS 203 E CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 F SG CYS 39 F CYS 39 1_555 F SG CYS 109 F CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 F SG CYS 156 F CYS 156 1_555 F SG CYS 216 F CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A OG SER 1449 B SER 1449 1_555 G P PN7 . B PN7 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.651 ? # _chem_comp.formula 'C11 H23 N2 O7 P S' _chem_comp.formula_weight 358.348 _chem_comp.id PN7 _chem_comp.mon_nstd_flag . _chem_comp.name N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C3 PN7 sing 258 n n C3 C4 PN7 sing 259 n n C3 C2 PN7 sing 260 n n O4 C4 PN7 doub 261 n n CE2 C2 PN7 sing 262 n n C4 N5 PN7 sing 263 n n C1 C2 PN7 sing 264 n n C1 O3P PN7 sing 265 n n N5 C6 PN7 sing 266 n n C2 CE1 PN7 sing 267 n n C6 C7 PN7 sing 268 n n O2P P PN7 doub 269 n n O1P P PN7 sing 270 n n C7 C8 PN7 sing 271 n n P O3P PN7 sing 272 n n O8 C8 PN7 doub 273 n n C8 N9 PN7 sing 274 n n N9 C10 PN7 sing 275 n n S12 C11 PN7 sing 276 n n C10 C11 PN7 sing 277 n n O3 H1 PN7 sing 278 n n C1 H2 PN7 sing 279 n n C1 H3 PN7 sing 280 n n O1P H4 PN7 sing 281 n n CE1 H5 PN7 sing 282 n n CE1 H6 PN7 sing 283 n n CE1 H7 PN7 sing 284 n n CE2 H8 PN7 sing 285 n n CE2 H9 PN7 sing 286 n n CE2 H10 PN7 sing 287 n n C3 H11 PN7 sing 288 n n N5 H12 PN7 sing 289 n n C6 H13 PN7 sing 290 n n C6 H14 PN7 sing 291 n n C7 H15 PN7 sing 292 n n C7 H16 PN7 sing 293 n n N9 H17 PN7 sing 294 n n C10 H18 PN7 sing 295 n n C10 H19 PN7 sing 296 n n C11 H20 PN7 sing 297 n n C11 H21 PN7 sing 298 n n S12 H22 PN7 sing 299 n n P O4P PN7 sing 300 n n O4P H23 PN7 sing 301 n n # _atom_sites.entry_id 7M7I _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id G _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id PN7 _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1601 _pdbx_nonpoly_scheme.auth_seq_num 1491 _pdbx_nonpoly_scheme.pdb_mon_id PN7 _pdbx_nonpoly_scheme.auth_mon_id PN7 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 PN7 . . . G 4 185.066 188.832 159.222 1 30.16 ? O3 PN7 1601 B 1 HETATM 2 O O4 PN7 . . . G 4 186.128 186.341 159.833 1 30.16 ? O4 PN7 1601 B 1 HETATM 3 C C2 PN7 . . . G 4 184.211 187.461 157.64 1 30.16 ? C2 PN7 1601 B 1 HETATM 4 C C1 PN7 . . . G 4 183.266 188.519 157.126 1 30.16 ? C1 PN7 1601 B 1 HETATM 5 P P PN7 . . . G 4 183.19 191.021 157.869 1 30.16 ? P PN7 1601 B 1 HETATM 6 O O1P PN7 . . . G 4 182.237 190.572 158.952 1 30.16 ? O1P PN7 1601 B 1 HETATM 7 O O2P PN7 . . . G 4 184.175 192.007 158.451 1 30.16 ? O2P PN7 1601 B 1 HETATM 8 O O3P PN7 . . . G 4 184.001 189.704 157.29 1 30.16 ? O3P PN7 1601 B 1 HETATM 9 C CE1 PN7 . . . G 4 183.798 186.042 157.264 1 30.16 ? CE1 PN7 1601 B 1 HETATM 10 C CE2 PN7 . . . G 4 185.529 187.885 157.016 1 30.16 ? CE2 PN7 1601 B 1 HETATM 11 C C3 PN7 . . . G 4 184.296 187.678 159.133 1 30.16 ? C3 PN7 1601 B 1 HETATM 12 C C4 PN7 . . . G 4 184.973 186.549 159.905 1 30.16 ? C4 PN7 1601 B 1 HETATM 13 N N5 PN7 . . . G 4 184.224 185.713 160.796 1 30.16 ? N5 PN7 1601 B 1 HETATM 14 C C6 PN7 . . . G 4 184.993 184.702 161.467 1 30.16 ? C6 PN7 1601 B 1 HETATM 15 C C7 PN7 . . . G 4 184.235 183.396 161.364 1 30.16 ? C7 PN7 1601 B 1 HETATM 16 C C8 PN7 . . . G 4 183.652 182.829 162.645 1 30.16 ? C8 PN7 1601 B 1 HETATM 17 O O8 PN7 . . . G 4 182.942 183.465 163.334 1 30.16 ? O8 PN7 1601 B 1 HETATM 18 N N9 PN7 . . . G 4 183.985 181.486 163.026 1 30.16 ? N9 PN7 1601 B 1 HETATM 19 C C10 PN7 . . . G 4 184.854 180.731 162.161 1 30.16 ? C10 PN7 1601 B 1 HETATM 20 C C11 PN7 . . . G 4 184.059 179.641 161.475 1 30.16 ? C11 PN7 1601 B 1 HETATM 21 S S12 PN7 . . . G 4 184.945 179.18 159.982 1 30.16 ? S12 PN7 1601 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 21 #