data_7M93
#
_model_server_result.job_id            KmKy-vGmmndfOn1eICvTuQ 
_model_server_result.datetime_utc      '2024-11-04 22:31:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7m93 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":204}' 
#
_entry.id    7M93 
#
_exptl.entry_id    7M93 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    13 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.05 
_cell.angle_gamma         90 
_cell.entry_id            7M93 
_cell.length_a            70.597 
_cell.length_b            55.174 
_cell.length_c            92.985 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7M93 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,L,M,N,V,W 1 1 
C,D,O,P,Q,R,S,T,U,X,Y 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 M N N 
? 3 N N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 U N N 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 237 n n 
C10 C9 OLC doub 238 n n 
C10 C11 OLC sing 239 n n 
C9 C8 OLC sing 240 n n 
C17 C16 OLC sing 241 z n 
C11 C12 OLC sing 242 n n 
C8 C7 OLC sing 243 n n 
C24 C22 OLC sing 244 n n 
C24 O25 OLC sing 245 n n 
C16 C15 OLC sing 246 n n 
C12 C13 OLC sing 247 n n 
C7 C6 OLC sing 248 n n 
C15 C14 OLC sing 249 n n 
C13 C14 OLC sing 250 n n 
C6 C5 OLC sing 251 n n 
C5 C4 OLC sing 252 n n 
C4 C3 OLC sing 253 n n 
C3 C2 OLC sing 254 n n 
C2 C1 OLC sing 255 n n 
C21 C22 OLC sing 256 n n 
C21 O20 OLC sing 257 n n 
C1 O19 OLC doub 258 n n 
C1 O20 OLC sing 259 n n 
C22 O23 OLC sing 260 n n 
C18 H18 OLC sing 261 n n 
C18 H18A OLC sing 262 n n 
C18 H18B OLC sing 263 n n 
C10 H10 OLC sing 264 n n 
C9 H9 OLC sing 265 n n 
C17 H17 OLC sing 266 n n 
C17 H17A OLC sing 267 n n 
C11 H11 OLC sing 268 n n 
C11 H11A OLC sing 269 n n 
C8 H8 OLC sing 270 n n 
C8 H8A OLC sing 271 n n 
C24 H24 OLC sing 272 n n 
C24 H24A OLC sing 273 n n 
C16 H16 OLC sing 274 n n 
C16 H16A OLC sing 275 n n 
C12 H12 OLC sing 276 n n 
C12 H12A OLC sing 277 n n 
C7 H7 OLC sing 278 n n 
C7 H7A OLC sing 279 n n 
C15 H15 OLC sing 280 n n 
C15 H15A OLC sing 281 n n 
C13 H13 OLC sing 282 n n 
C13 H13A OLC sing 283 n n 
C6 H6 OLC sing 284 n n 
C6 H6A OLC sing 285 n n 
C14 H14 OLC sing 286 n n 
C14 H14A OLC sing 287 n n 
C5 H5 OLC sing 288 n n 
C5 H5A OLC sing 289 n n 
C4 H4 OLC sing 290 n n 
C4 H4A OLC sing 291 n n 
C3 H3 OLC sing 292 n n 
C3 H3A OLC sing 293 n n 
C2 H2 OLC sing 294 n n 
C2 H2A OLC sing 295 n n 
C21 H21 OLC sing 296 n n 
C21 H21A OLC sing 297 n n 
C22 H22 OLC sing 298 n n 
O25 HO25 OLC sing 299 n n 
O23 HO23 OLC sing 300 n n 
#
_atom_sites.entry_id                     7M93 
_atom_sites.fract_transf_matrix[1][1]    0.014165 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001252 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018124 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010796 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 YT1 A 1 201 201 YT1 DRG . 
F 3 OLC A 1 202 301 OLC OLC . 
G 3 OLC A 1 203 401 OLC OLC . 
H 3 OLC A 1 204 501 OLC OLC . 
I 3 OLC A 1 205 601 OLC OLC . 
J 3 OLC A 1 206 701 OLC OLC . 
K 3 OLC A 1 207 801 OLC OLC . 
L 2 YT1 B 1 201 201 YT1 DRG . 
M 3 OLC B 1 202 301 OLC OLC . 
N 3 OLC B 1 203 401 OLC OLC . 
O 2 YT1 C 1 201 201 YT1 DRG . 
P 3 OLC C 1 202 301 OLC OLC . 
Q 3 OLC C 1 203 401 OLC OLC . 
R 3 OLC C 1 204 501 OLC OLC . 
S 3 OLC C 1 205 301 OLC OLC . 
T 2 YT1 D 1 201 201 YT1 DRG . 
U 3 OLC D 1 202 401 OLC OLC . 
V 4 HOH A 1 301 186 HOH HOH . 
V 4 HOH A 2 302 156 HOH HOH . 
V 4 HOH A 3 303 94 HOH HOH . 
V 4 HOH A 4 304 76 HOH HOH . 
V 4 HOH A 5 305 184 HOH HOH . 
V 4 HOH A 6 306 178 HOH HOH . 
V 4 HOH A 7 307 82 HOH HOH . 
V 4 HOH A 8 308 74 HOH HOH . 
V 4 HOH A 9 309 90 HOH HOH . 
W 4 HOH B 1 301 179 HOH HOH . 
W 4 HOH B 2 302 158 HOH HOH . 
W 4 HOH B 3 303 169 HOH HOH . 
W 4 HOH B 4 304 91 HOH HOH . 
W 4 HOH B 5 305 112 HOH HOH . 
W 4 HOH B 6 306 171 HOH HOH . 
X 4 HOH C 1 301 187 HOH HOH . 
X 4 HOH C 2 302 188 HOH HOH . 
X 4 HOH C 3 303 174 HOH HOH . 
X 4 HOH C 4 304 128 HOH HOH . 
X 4 HOH C 5 305 121 HOH HOH . 
X 4 HOH C 6 306 129 HOH HOH . 
Y 4 HOH D 1 301 23 HOH HOH . 
Y 4 HOH D 2 302 180 HOH HOH . 
Y 4 HOH D 3 303 175 HOH HOH . 
Y 4 HOH D 4 304 135 HOH HOH . 
Y 4 HOH D 5 305 25 HOH HOH . 
Y 4 HOH D 6 306 136 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 OLC . . . R 3 14.079 3.237 16.889 1 63.8 ? C10 OLC 204 C 1 
HETATM 2 C C9 OLC . . . R 3 14.219 2.746 15.671 1 67.78 ? C9 OLC 204 C 1 
HETATM 3 C C11 OLC . . . R 3 15.176 3.724 17.784 1 59.98 ? C11 OLC 204 C 1 
HETATM 4 C C8 OLC . . . R 3 13.106 2.268 14.788 1 65.14 ? C8 OLC 204 C 1 
HETATM 5 C C24 OLC . . . R 3 9.441 0.615 3.582 1 69.32 ? C24 OLC 204 C 1 
HETATM 6 C C12 OLC . . . R 3 15.171 5.242 17.942 1 55.54 ? C12 OLC 204 C 1 
HETATM 7 C C7 OLC . . . R 3 13.14 0.772 14.474 1 64.79 ? C7 OLC 204 C 1 
HETATM 8 C C13 OLC . . . R 3 13.882 5.795 18.529 1 51.88 ? C13 OLC 204 C 1 
HETATM 9 C C6 OLC . . . R 3 13.995 0.395 13.274 1 60.69 ? C6 OLC 204 C 1 
HETATM 10 C C14 OLC . . . R 3 13.872 7.307 18.682 1 41.78 ? C14 OLC 204 C 1 
HETATM 11 C C5 OLC . . . R 3 13.664 1.179 12.012 1 58.53 ? C5 OLC 204 C 1 
HETATM 12 C C4 OLC . . . R 3 13.424 0.319 10.779 1 55.44 ? C4 OLC 204 C 1 
HETATM 13 C C3 OLC . . . R 3 13.59 1.078 9.473 1 56.99 ? C3 OLC 204 C 1 
HETATM 14 C C2 OLC . . . R 3 13.102 0.313 8.25 1 56.3 ? C2 OLC 204 C 1 
HETATM 15 C C21 OLC . . . R 3 10.283 0.91 5.935 1 65.13 ? C21 OLC 204 C 1 
HETATM 16 C C1 OLC . . . R 3 11.763 0.796 7.783 1 62.91 ? C1 OLC 204 C 1 
HETATM 17 C C22 OLC . . . R 3 9.852 -0.071 4.868 1 72.57 ? C22 OLC 204 C 1 
HETATM 18 O O19 OLC . . . R 3 11.018 1.469 8.443 1 66.71 ? O19 OLC 204 C 1 
HETATM 19 O O25 OLC . . . R 3 8.991 -0.329 2.618 1 73 ? O25 OLC 204 C 1 
HETATM 20 O O23 OLC . . . R 3 10.895 -1.016 4.614 1 80.96 ? O23 OLC 204 C 1 
HETATM 21 O O20 OLC . . . R 3 11.498 0.401 6.533 1 68.11 ? O20 OLC 204 C 1 
#
_model_server_stats.io_time_ms              75 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           21 
#