data_7M96 # _model_server_result.job_id r7VWFLfz5FveRR2T6VpDqA _model_server_result.datetime_utc '2024-11-21 13:50:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7m96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":206}' # _entry.id 7M96 # _exptl.entry_id 7M96 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 20 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.5 _cell.angle_gamma 90 _cell.entry_id 7M96 _cell.length_a 70.7 _cell.length_b 55.35 _cell.length_c 92.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,EA,FA 1 1 C,D,T,U,V,W,X,Y,Z,AA,BA,CA,DA,GA,HA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 M N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 262 n n C10 C9 OLC doub 263 n n C10 C11 OLC sing 264 n n C9 C8 OLC sing 265 n n C17 C16 OLC sing 266 z n C11 C12 OLC sing 267 n n C8 C7 OLC sing 268 n n C24 C22 OLC sing 269 n n C24 O25 OLC sing 270 n n C16 C15 OLC sing 271 n n C12 C13 OLC sing 272 n n C7 C6 OLC sing 273 n n C15 C14 OLC sing 274 n n C13 C14 OLC sing 275 n n C6 C5 OLC sing 276 n n C5 C4 OLC sing 277 n n C4 C3 OLC sing 278 n n C3 C2 OLC sing 279 n n C2 C1 OLC sing 280 n n C21 C22 OLC sing 281 n n C21 O20 OLC sing 282 n n C1 O19 OLC doub 283 n n C1 O20 OLC sing 284 n n C22 O23 OLC sing 285 n n C18 H18 OLC sing 286 n n C18 H18A OLC sing 287 n n C18 H18B OLC sing 288 n n C10 H10 OLC sing 289 n n C9 H9 OLC sing 290 n n C17 H17 OLC sing 291 n n C17 H17A OLC sing 292 n n C11 H11 OLC sing 293 n n C11 H11A OLC sing 294 n n C8 H8 OLC sing 295 n n C8 H8A OLC sing 296 n n C24 H24 OLC sing 297 n n C24 H24A OLC sing 298 n n C16 H16 OLC sing 299 n n C16 H16A OLC sing 300 n n C12 H12 OLC sing 301 n n C12 H12A OLC sing 302 n n C7 H7 OLC sing 303 n n C7 H7A OLC sing 304 n n C15 H15 OLC sing 305 n n C15 H15A OLC sing 306 n n C13 H13 OLC sing 307 n n C13 H13A OLC sing 308 n n C6 H6 OLC sing 309 n n C6 H6A OLC sing 310 n n C14 H14 OLC sing 311 n n C14 H14A OLC sing 312 n n C5 H5 OLC sing 313 n n C5 H5A OLC sing 314 n n C4 H4 OLC sing 315 n n C4 H4A OLC sing 316 n n C3 H3 OLC sing 317 n n C3 H3A OLC sing 318 n n C2 H2 OLC sing 319 n n C2 H2A OLC sing 320 n n C21 H21 OLC sing 321 n n C21 H21A OLC sing 322 n n C22 H22 OLC sing 323 n n O25 HO25 OLC sing 324 n n O23 HO23 OLC sing 325 n n # _atom_sites.entry_id 7M96 _atom_sites.fract_transf_matrix[1][1] 0.014144 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001113 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018067 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010792 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 YTD A 1 201 201 YTD Z7R . F 3 OLC A 1 202 204 OLC OLC . G 3 OLC A 1 203 205 OLC OLC . H 3 OLC A 1 204 206 OLC OLC . I 3 OLC A 1 205 301 OLC OLC . J 3 OLC A 1 206 401 OLC OLC . K 3 OLC A 1 207 501 OLC OLC . L 4 MES A 1 208 601 MES MES . M 3 OLC A 1 209 401 OLC OLC . N 2 YTD B 1 201 201 YTD Z7R . O 3 OLC B 1 202 203 OLC OLC . P 3 OLC B 1 203 204 OLC OLC . Q 3 OLC B 1 204 205 OLC OLC . R 3 OLC B 1 205 206 OLC OLC . S 3 OLC B 1 206 301 OLC OLC . T 2 YTD C 1 201 201 YTD Z7R . U 3 OLC C 1 202 203 OLC OLC . V 3 OLC C 1 203 204 OLC OLC . W 3 OLC C 1 204 301 OLC OLC . X 2 YTD D 1 201 201 YTD Z7R . Y 3 OLC D 1 202 203 OLC OLC . Z 3 OLC D 1 203 204 OLC OLC . AA 3 OLC D 1 204 205 OLC OLC . BA 3 OLC D 1 205 301 OLC OLC . CA 3 OLC D 1 206 401 OLC OLC . DA 4 MES D 1 207 501 MES MES . EA 5 HOH A 1 301 1 HOH HOH . EA 5 HOH A 2 302 39 HOH HOH . EA 5 HOH A 3 303 50 HOH HOH . EA 5 HOH A 4 304 38 HOH HOH . EA 5 HOH A 5 305 34 HOH HOH . EA 5 HOH A 6 306 51 HOH HOH . EA 5 HOH A 7 307 29 HOH HOH . EA 5 HOH A 8 308 31 HOH HOH . EA 5 HOH A 9 309 27 HOH HOH . EA 5 HOH A 10 310 53 HOH HOH . EA 5 HOH A 11 311 28 HOH HOH . EA 5 HOH A 12 312 30 HOH HOH . FA 5 HOH B 1 301 9 HOH HOH . FA 5 HOH B 2 302 52 HOH HOH . FA 5 HOH B 3 303 2 HOH HOH . FA 5 HOH B 4 304 54 HOH HOH . FA 5 HOH B 5 305 12 HOH HOH . FA 5 HOH B 6 306 14 HOH HOH . FA 5 HOH B 7 307 42 HOH HOH . FA 5 HOH B 8 308 44 HOH HOH . FA 5 HOH B 9 309 8 HOH HOH . FA 5 HOH B 10 310 37 HOH HOH . FA 5 HOH B 11 311 10 HOH HOH . GA 5 HOH C 1 301 3 HOH HOH . GA 5 HOH C 2 302 17 HOH HOH . GA 5 HOH C 3 303 16 HOH HOH . GA 5 HOH C 4 304 46 HOH HOH . GA 5 HOH C 5 305 20 HOH HOH . GA 5 HOH C 6 306 21 HOH HOH . GA 5 HOH C 7 307 22 HOH HOH . HA 5 HOH D 1 301 49 HOH HOH . HA 5 HOH D 2 302 4 HOH HOH . HA 5 HOH D 3 303 47 HOH HOH . HA 5 HOH D 4 304 48 HOH HOH . HA 5 HOH D 5 305 56 HOH HOH . HA 5 HOH D 6 306 57 HOH HOH . HA 5 HOH D 7 307 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . S 3 -27.437 12.925 -32.825 1 66.12 ? C18 OLC 206 B 1 HETATM 2 C C10 OLC . . . S 3 -18.716 9.388 -29.912 1 69.9 ? C10 OLC 206 B 1 HETATM 3 C C9 OLC . . . S 3 -17.938 8.482 -29.354 1 70.39 ? C9 OLC 206 B 1 HETATM 4 C C17 OLC . . . S 3 -26.231 12.89 -31.893 1 66.97 ? C17 OLC 206 B 1 HETATM 5 C C11 OLC . . . S 3 -20.141 9.036 -30.338 1 70.59 ? C11 OLC 206 B 1 HETATM 6 C C8 OLC . . . S 3 -18.439 7.055 -29.121 1 69.47 ? C8 OLC 206 B 1 HETATM 7 C C16 OLC . . . S 3 -25.079 12.167 -32.583 1 67.43 ? C16 OLC 206 B 1 HETATM 8 C C12 OLC . . . S 3 -20.874 10.3 -30.785 1 69.84 ? C12 OLC 206 B 1 HETATM 9 C C7 OLC . . . S 3 -17.548 6.347 -28.099 1 64.6 ? C7 OLC 206 B 1 HETATM 10 C C15 OLC . . . S 3 -24.434 11.236 -31.563 1 68.88 ? C15 OLC 206 B 1 HETATM 11 C C13 OLC . . . S 3 -22.364 10.011 -30.948 1 58.97 ? C13 OLC 206 B 1 HETATM 12 C C6 OLC . . . S 3 -16.092 6.75 -28.327 1 69.06 ? C6 OLC 206 B 1 HETATM 13 C C14 OLC . . . S 3 -22.961 11.043 -31.902 1 59.56 ? C14 OLC 206 B 1 HETATM 14 C C5 OLC . . . S 3 -15.198 6.185 -27.224 1 69.77 ? C5 OLC 206 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #