data_7MBL # _model_server_result.job_id aZrvg1tKI1EBWtQA0v79LQ _model_server_result.datetime_utc '2024-11-10 01:30:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":605}' # _entry.id 7MBL # _exptl.entry_id 7MBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7MBL _cell.length_a 93.312 _cell.length_b 93.312 _cell.length_c 141.51 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf4 A SG CYS 123 A CYS 123 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf5 A SG CYS 167 A CYS 167 1_555 A SG CYS 176 A CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf6 A SG CYS 199 A CYS 199 1_555 A SG CYS 245 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf7 A SG CYS 244 A CYS 244 1_555 A SG CYS 252 A CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? disulf ? disulf8 A SG CYS 264 A CYS 264 1_555 A SG CYS 278 A CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf9 A SG CYS 277 A CYS 277 1_555 A SG CYS 288 A CYS 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf10 A SG CYS 315 A CYS 315 1_555 A SG CYS 360 A CYS 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf11 A SG CYS 359 A CYS 359 1_555 A SG CYS 368 A CYS 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf12 A SG CYS 391 A CYS 391 1_555 A SG CYS 437 A CYS 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf13 A SG CYS 436 A CYS 436 1_555 A SG CYS 447 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf14 A SG CYS 460 A CYS 460 1_555 A SG CYS 476 A CYS 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf15 A SG CYS 475 A CYS 475 1_555 A SG CYS 486 A CYS 486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf16 A SG CYS 513 A CYS 513 1_555 A SG CYS 558 A CYS 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf17 A SG CYS 557 A CYS 557 1_555 A SG CYS 566 A CYS 566 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc1 A NE2 HIS 9 A HIS 9 1_555 E CO CO . A CO 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc2 A OD2 ASP 13 A ASP 13 1_555 E CO CO . A CO 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc3 A NE2 HIS 67 A HIS 67 1_555 C CO CO . A CO 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc4 A NE2 HIS 109 A HIS 109 1_555 D CO CO . A CO 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc5 A NE2 HIS 246 A HIS 246 1_555 B CO CO . A CO 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc6 A OD2 ASP 248 A ASP 248 1_555 C CO CO . A CO 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc7 A NE2 HIS 337 A HIS 337 1_555 F CO CO . A CO 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc8 B CO CO . A CO 601 1_555 K O HOH . A HOH 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc9 B CO CO . A CO 601 1_555 K O HOH . A HOH 720 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc10 B CO CO . A CO 601 1_555 K O HOH . A HOH 734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc11 B CO CO . A CO 601 1_555 K O HOH . A HOH 739 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc12 B CO CO . A CO 601 1_555 K O HOH . A HOH 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc13 C CO CO . A CO 602 1_555 K O HOH . A HOH 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc14 C CO CO . A CO 602 1_555 K O HOH . A HOH 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc15 C CO CO . A CO 602 1_555 K O HOH . A HOH 741 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc16 C CO CO . A CO 602 1_555 K O HOH . A HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc17 D CO CO . A CO 603 1_555 K O HOH . A HOH 724 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc18 D CO CO . A CO 603 1_555 K O HOH . A HOH 742 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc19 D CO CO . A CO 603 1_555 K O HOH . A HOH 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc20 D CO CO . A CO 603 1_555 K O HOH . A HOH 748 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc21 D CO CO . A CO 603 1_555 K O HOH . A HOH 764 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc22 E CO CO . A CO 604 1_555 K O HOH . A HOH 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc23 E CO CO . A CO 604 1_555 K O HOH . A HOH 721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc24 E CO CO . A CO 604 1_555 K O HOH . A HOH 722 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc25 E CO CO . A CO 604 1_555 K O HOH . A HOH 727 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc26 F CO CO . A CO 605 1_555 K O HOH . A HOH 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc27 F CO CO . A CO 605 1_555 K O HOH . A HOH 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc28 F CO CO . A CO 605 1_555 K O HOH . A HOH 732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc29 F CO CO . A CO 605 1_555 K O HOH . A HOH 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc30 F CO CO . A CO 605 1_555 K O HOH . A HOH 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7MBL _atom_sites.fract_transf_matrix[1][1] 0.010717 _atom_sites.fract_transf_matrix[1][2] 0.006187 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012375 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 601 1 CO CO . C 2 CO A 1 602 2 CO CO . D 2 CO A 1 603 3 CO CO . E 2 CO A 1 604 4 CO CO . F 2 CO A 1 605 5 CO CO . G 3 SO4 A 1 606 1 SO4 SO4 . H 3 SO4 A 1 607 2 SO4 SO4 . I 3 SO4 A 1 608 3 SO4 SO4 . J 3 SO4 A 1 609 4 SO4 SO4 . K 4 HOH A 1 701 48 HOH HOH . K 4 HOH A 2 702 41 HOH HOH . K 4 HOH A 3 703 66 HOH HOH . K 4 HOH A 4 704 26 HOH HOH . K 4 HOH A 5 705 61 HOH HOH . K 4 HOH A 6 706 34 HOH HOH . K 4 HOH A 7 707 56 HOH HOH . K 4 HOH A 8 708 67 HOH HOH . K 4 HOH A 9 709 39 HOH HOH . K 4 HOH A 10 710 27 HOH HOH . K 4 HOH A 11 711 14 HOH HOH . K 4 HOH A 12 712 69 HOH HOH . K 4 HOH A 13 713 2 HOH HOH . K 4 HOH A 14 714 33 HOH HOH . K 4 HOH A 15 715 65 HOH HOH . K 4 HOH A 16 716 50 HOH HOH . K 4 HOH A 17 717 22 HOH HOH . K 4 HOH A 18 718 19 HOH HOH . K 4 HOH A 19 719 29 HOH HOH . K 4 HOH A 20 720 4 HOH HOH . K 4 HOH A 21 721 16 HOH HOH . K 4 HOH A 22 722 28 HOH HOH . K 4 HOH A 23 723 54 HOH HOH . K 4 HOH A 24 724 8 HOH HOH . K 4 HOH A 25 725 55 HOH HOH . K 4 HOH A 26 726 11 HOH HOH . K 4 HOH A 27 727 18 HOH HOH . K 4 HOH A 28 728 49 HOH HOH . K 4 HOH A 29 729 62 HOH HOH . K 4 HOH A 30 730 52 HOH HOH . K 4 HOH A 31 731 30 HOH HOH . K 4 HOH A 32 732 23 HOH HOH . K 4 HOH A 33 733 40 HOH HOH . K 4 HOH A 34 734 5 HOH HOH . K 4 HOH A 35 735 58 HOH HOH . K 4 HOH A 36 736 45 HOH HOH . K 4 HOH A 37 737 46 HOH HOH . K 4 HOH A 38 738 44 HOH HOH . K 4 HOH A 39 739 1 HOH HOH . K 4 HOH A 40 740 51 HOH HOH . K 4 HOH A 41 741 13 HOH HOH . K 4 HOH A 42 742 6 HOH HOH . K 4 HOH A 43 743 12 HOH HOH . K 4 HOH A 44 744 36 HOH HOH . K 4 HOH A 45 745 7 HOH HOH . K 4 HOH A 46 746 35 HOH HOH . K 4 HOH A 47 747 43 HOH HOH . K 4 HOH A 48 748 10 HOH HOH . K 4 HOH A 49 749 42 HOH HOH . K 4 HOH A 50 750 57 HOH HOH . K 4 HOH A 51 751 68 HOH HOH . K 4 HOH A 52 752 21 HOH HOH . K 4 HOH A 53 753 63 HOH HOH . K 4 HOH A 54 754 60 HOH HOH . K 4 HOH A 55 755 31 HOH HOH . K 4 HOH A 56 756 25 HOH HOH . K 4 HOH A 57 757 59 HOH HOH . K 4 HOH A 58 758 53 HOH HOH . K 4 HOH A 59 759 32 HOH HOH . K 4 HOH A 60 760 38 HOH HOH . K 4 HOH A 61 761 47 HOH HOH . K 4 HOH A 62 762 3 HOH HOH . K 4 HOH A 63 763 20 HOH HOH . K 4 HOH A 64 764 9 HOH HOH . K 4 HOH A 65 765 37 HOH HOH . K 4 HOH A 66 766 24 HOH HOH . K 4 HOH A 67 767 64 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 40.162 _atom_site.Cartn_y -3.873 _atom_site.Cartn_z 90.816 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 141.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 605 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #