data_7MBR # _model_server_result.job_id gMbUV0SXHI78BM7cLT7xow _model_server_result.datetime_utc '2025-07-20 21:01:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mbr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1502}' # _entry.id 7MBR # _exptl.entry_id 7MBR _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 414.621 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (25R)-14beta,17beta-spirost-5-en-3beta-ol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MBR _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MBR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N ? 3 L N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 921 A ASN 921 1_555 E C1 NAG . A NAG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 B ND2 ASN 921 B ASN 921 1_555 H C1 NAG . B NAG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 C ND2 ASN 921 C ASN 921 1_555 K C1 NAG . C NAG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale4 D ND2 ASN 921 D ASN 921 1_555 O C1 NAG . D NAG 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'C27 H42 O3' _chem_comp.formula_weight 414.621 _chem_comp.id YUV _chem_comp.mon_nstd_flag . _chem_comp.name (25R)-14beta,17beta-spirost-5-en-3beta-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 YUV sing 404 n n C1 C2 YUV sing 405 n n C1 C26 YUV sing 406 n n C2 C3 YUV sing 407 n n C26 O2 YUV sing 408 n n C3 C4 YUV sing 409 n n O2 C4 YUV sing 410 n n C4 C5 YUV sing 411 n n C4 O YUV sing 412 n n C25 C5 YUV sing 413 n n C5 C6 YUV sing 414 n n O C7 YUV sing 415 n n C7 C6 YUV sing 416 n n C7 C8 YUV sing 417 n n C6 C10 YUV sing 418 n n C24 C10 YUV sing 419 n n C8 C9 YUV sing 420 n n C10 C11 YUV sing 421 n n C10 C9 YUV sing 422 n n C11 C12 YUV sing 423 n n C9 C14 YUV sing 424 n n C12 C13 YUV sing 425 n n C14 C13 YUV sing 426 n n C14 C15 YUV sing 427 n n C13 C18 YUV sing 428 n n C15 C16 YUV sing 429 n n C23 C18 YUV sing 430 n n C18 C17 YUV sing 431 n n C18 C19 YUV sing 432 n n C16 C17 YUV doub 433 n n C17 C22 YUV sing 434 n n C19 C20 YUV sing 435 n n C22 C21 YUV sing 436 n n C20 C21 YUV sing 437 n n C21 O1 YUV sing 438 n n C1 H1 YUV sing 439 n n C2 H2 YUV sing 440 n n C2 H3 YUV sing 441 n n O1 H4 YUV sing 442 n n C H5 YUV sing 443 n n C H6 YUV sing 444 n n C H7 YUV sing 445 n n C3 H8 YUV sing 446 n n C3 H9 YUV sing 447 n n C5 H10 YUV sing 448 n n C6 H11 YUV sing 449 n n C7 H12 YUV sing 450 n n C8 H13 YUV sing 451 n n C8 H14 YUV sing 452 n n C9 H15 YUV sing 453 n n C11 H16 YUV sing 454 n n C11 H17 YUV sing 455 n n C12 H18 YUV sing 456 n n C12 H19 YUV sing 457 n n C13 H20 YUV sing 458 n n C14 H21 YUV sing 459 n n C15 H22 YUV sing 460 n n C15 H23 YUV sing 461 n n C16 H24 YUV sing 462 n n C19 H25 YUV sing 463 n n C19 H26 YUV sing 464 n n C20 H27 YUV sing 465 n n C20 H28 YUV sing 466 n n C21 H29 YUV sing 467 n n C22 H30 YUV sing 468 n n C22 H31 YUV sing 469 n n C23 H32 YUV sing 470 n n C23 H33 YUV sing 471 n n C23 H34 YUV sing 472 n n C24 H35 YUV sing 473 n n C24 H36 YUV sing 474 n n C24 H37 YUV sing 475 n n C25 H38 YUV sing 476 n n C25 H39 YUV sing 477 n n C25 H40 YUV sing 478 n n C26 H41 YUV sing 479 n n C26 H42 YUV sing 480 n n # _atom_sites.entry_id 7MBR _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAG A 1 1501 1501 NAG NAG . F 3 YUV A 1 1502 3002 YUV DIO . G 4 YUY A 1 1503 3001 YUY GDP . H 2 NAG B 1 1501 1501 NAG NAG . I 3 YUV B 1 1502 3002 YUV DIO . J 4 YUY B 1 1503 3001 YUY GDP . K 2 NAG C 1 1501 1501 NAG NAG . L 3 YUV C 1 1502 3002 YUV DIO . M 4 YUY C 1 1503 3001 YUY GDP . N 4 YUY D 1 3001 3001 YUY GDP . O 2 NAG D 1 3002 1501 NAG NAG . P 3 YUV D 1 3003 3002 YUV DIO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 YUV . . . L 3 158.417 131.506 188.604 1 20 ? C1 YUV 1502 C 1 HETATM 2 C C2 YUV . . . L 3 157.425 130.447 189.043 1 20 ? C2 YUV 1502 C 1 HETATM 3 O O1 YUV . . . L 3 158.756 127.655 203.019 1 20 ? O1 YUV 1502 C 1 HETATM 4 C C YUV . . . L 3 157.732 132.676 187.909 1 20 ? C YUV 1502 C 1 HETATM 5 O O YUV . . . L 3 158.124 130.453 191.963 1 20 ? O YUV 1502 C 1 HETATM 6 O O2 YUV . . . L 3 159.852 130.887 190.47 1 20 ? O2 YUV 1502 C 1 HETATM 7 C C3 YUV . . . L 3 158.1 129.342 189.856 1 20 ? C3 YUV 1502 C 1 HETATM 8 C C4 YUV . . . L 3 158.967 129.897 190.967 1 20 ? C4 YUV 1502 C 1 HETATM 9 C C5 YUV . . . L 3 159.813 128.863 191.717 1 20 ? C5 YUV 1502 C 1 HETATM 10 C C6 YUV . . . L 3 159.888 129.43 193.15 1 20 ? C6 YUV 1502 C 1 HETATM 11 C C7 YUV . . . L 3 158.921 130.632 193.136 1 20 ? C7 YUV 1502 C 1 HETATM 12 C C8 YUV . . . L 3 158.092 130.579 194.415 1 20 ? C8 YUV 1502 C 1 HETATM 13 C C9 YUV . . . L 3 158.941 129.678 195.313 1 20 ? C9 YUV 1502 C 1 HETATM 14 C C10 YUV . . . L 3 159.424 128.57 194.359 1 20 ? C10 YUV 1502 C 1 HETATM 15 C C11 YUV . . . L 3 160.536 127.813 195.093 1 20 ? C11 YUV 1502 C 1 HETATM 16 C C12 YUV . . . L 3 160.064 127.265 196.44 1 20 ? C12 YUV 1502 C 1 HETATM 17 C C13 YUV . . . L 3 159.434 128.322 197.358 1 20 ? C13 YUV 1502 C 1 HETATM 18 C C14 YUV . . . L 3 158.373 129.163 196.637 1 20 ? C14 YUV 1502 C 1 HETATM 19 C C15 YUV . . . L 3 157.952 130.329 197.522 1 20 ? C15 YUV 1502 C 1 HETATM 20 C C16 YUV . . . L 3 157.743 129.923 198.947 1 20 ? C16 YUV 1502 C 1 HETATM 21 C C17 YUV . . . L 3 158.153 128.785 199.483 1 20 ? C17 YUV 1502 C 1 HETATM 22 C C18 YUV . . . L 3 158.916 127.724 198.698 1 20 ? C18 YUV 1502 C 1 HETATM 23 C C19 YUV . . . L 3 160.121 127.257 199.53 1 20 ? C19 YUV 1502 C 1 HETATM 24 C C20 YUV . . . L 3 159.747 126.859 200.958 1 20 ? C20 YUV 1502 C 1 HETATM 25 C C21 YUV . . . L 3 159.099 128.019 201.679 1 20 ? C21 YUV 1502 C 1 HETATM 26 C C22 YUV . . . L 3 157.859 128.468 200.931 1 20 ? C22 YUV 1502 C 1 HETATM 27 C C23 YUV . . . L 3 157.971 126.531 198.46 1 20 ? C23 YUV 1502 C 1 HETATM 28 C C24 YUV . . . L 3 158.282 127.615 193.978 1 20 ? C24 YUV 1502 C 1 HETATM 29 C C25 YUV . . . L 3 161.171 128.569 191.085 1 20 ? C25 YUV 1502 C 1 HETATM 30 C C26 YUV . . . L 3 159.194 131.971 189.804 1 20 ? C26 YUV 1502 C 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 128 _model_server_stats.query_time_ms 1000 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 30 #