data_7MDJ # _model_server_result.job_id kP6WbU63544VZJlU4SKITQ _model_server_result.datetime_utc '2024-10-19 04:38:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mdj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7MDJ # _exptl.entry_id 7MDJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MDJ _cell.length_a 138.409 _cell.length_b 138.409 _cell.length_c 71.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MDJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 25 A CYS 25 1_555 A SG CYS 99 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 148 A CYS 148 1_555 A SG CYS 204 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 B SG CYS 24 B CYS 24 1_555 B SG CYS 89 B CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? disulf ? disulf4 B SG CYS 135 B CYS 135 1_555 B SG CYS 195 B CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 C O THR 75 C THR 75 1_555 D K K . C K 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.031 ? metalc ? metalc2 C OG1 THR 75 C THR 75 1_555 D K K . C K 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc3 C O THR 75 C THR 75 1_555 D K K . C K 201 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.031 ? metalc ? metalc4 C OG1 THR 75 C THR 75 1_555 D K K . C K 201 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc5 C O THR 75 C THR 75 1_555 F K K . C K 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc6 C O THR 75 C THR 75 1_555 F K K . C K 203 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc7 C O VAL 76 C VAL 76 1_555 E K K . C K 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc8 C O VAL 76 C VAL 76 1_555 E K K . C K 202 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc9 C O GLY 77 C GLY 77 1_555 E K K . C K 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.256 ? metalc ? metalc10 C O GLY 77 C GLY 77 1_555 E K K . C K 202 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.256 ? metalc ? metalc11 C O GLY 77 C GLY 77 1_555 G K K . C K 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc12 C O GLY 77 C GLY 77 1_555 G K K . C K 204 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc13 E K K . C K 202 1_555 J O HOH . C HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc14 E K K . C K 202 1_555 J O HOH . C HOH 302 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc15 F K K . C K 203 1_555 J O HOH . C HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc16 F K K . C K 203 1_555 J O HOH . C HOH 302 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7MDJ _atom_sites.fract_transf_matrix[1][1] 0.007225 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007225 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 K C 1 201 1 K K . E 4 K C 1 202 2 K K . F 4 K C 1 203 3 K K . G 4 K C 1 204 4 K K . H 5 HOH A 1 301 51 HOH HOH . H 5 HOH A 2 302 113 HOH HOH . H 5 HOH A 3 303 27 HOH HOH . H 5 HOH A 4 304 80 HOH HOH . H 5 HOH A 5 305 131 HOH HOH . H 5 HOH A 6 306 105 HOH HOH . H 5 HOH A 7 307 2 HOH HOH . H 5 HOH A 8 308 29 HOH HOH . H 5 HOH A 9 309 18 HOH HOH . H 5 HOH A 10 310 35 HOH HOH . H 5 HOH A 11 311 37 HOH HOH . H 5 HOH A 12 312 74 HOH HOH . H 5 HOH A 13 313 34 HOH HOH . H 5 HOH A 14 314 75 HOH HOH . H 5 HOH A 15 315 6 HOH HOH . H 5 HOH A 16 316 86 HOH HOH . H 5 HOH A 17 317 15 HOH HOH . H 5 HOH A 18 318 101 HOH HOH . H 5 HOH A 19 319 69 HOH HOH . H 5 HOH A 20 320 46 HOH HOH . H 5 HOH A 21 321 87 HOH HOH . H 5 HOH A 22 322 17 HOH HOH . H 5 HOH A 23 323 32 HOH HOH . H 5 HOH A 24 324 36 HOH HOH . H 5 HOH A 25 325 91 HOH HOH . H 5 HOH A 26 326 28 HOH HOH . H 5 HOH A 27 327 88 HOH HOH . H 5 HOH A 28 328 99 HOH HOH . H 5 HOH A 29 329 125 HOH HOH . H 5 HOH A 30 330 54 HOH HOH . H 5 HOH A 31 331 77 HOH HOH . H 5 HOH A 32 332 59 HOH HOH . H 5 HOH A 33 333 124 HOH HOH . H 5 HOH A 34 334 121 HOH HOH . H 5 HOH A 35 335 61 HOH HOH . H 5 HOH A 36 336 9 HOH HOH . H 5 HOH A 37 337 72 HOH HOH . H 5 HOH A 38 338 53 HOH HOH . H 5 HOH A 39 339 71 HOH HOH . H 5 HOH A 40 340 58 HOH HOH . H 5 HOH A 41 341 12 HOH HOH . H 5 HOH A 42 342 117 HOH HOH . H 5 HOH A 43 343 33 HOH HOH . H 5 HOH A 44 344 98 HOH HOH . H 5 HOH A 45 345 103 HOH HOH . H 5 HOH A 46 346 60 HOH HOH . H 5 HOH A 47 347 44 HOH HOH . H 5 HOH A 48 348 111 HOH HOH . H 5 HOH A 49 349 57 HOH HOH . H 5 HOH A 50 350 21 HOH HOH . H 5 HOH A 51 351 45 HOH HOH . H 5 HOH A 52 352 68 HOH HOH . H 5 HOH A 53 353 126 HOH HOH . H 5 HOH A 54 354 63 HOH HOH . H 5 HOH A 55 355 67 HOH HOH . H 5 HOH A 56 356 70 HOH HOH . H 5 HOH A 57 357 123 HOH HOH . H 5 HOH A 58 358 76 HOH HOH . H 5 HOH A 59 359 55 HOH HOH . I 5 HOH B 1 301 106 HOH HOH . I 5 HOH B 2 302 19 HOH HOH . I 5 HOH B 3 303 95 HOH HOH . I 5 HOH B 4 304 8 HOH HOH . I 5 HOH B 5 305 11 HOH HOH . I 5 HOH B 6 306 108 HOH HOH . I 5 HOH B 7 307 42 HOH HOH . I 5 HOH B 8 308 7 HOH HOH . I 5 HOH B 9 309 16 HOH HOH . I 5 HOH B 10 310 13 HOH HOH . I 5 HOH B 11 311 128 HOH HOH . I 5 HOH B 12 312 97 HOH HOH . I 5 HOH B 13 313 79 HOH HOH . I 5 HOH B 14 314 26 HOH HOH . I 5 HOH B 15 315 14 HOH HOH . I 5 HOH B 16 316 89 HOH HOH . I 5 HOH B 17 317 100 HOH HOH . I 5 HOH B 18 318 41 HOH HOH . I 5 HOH B 19 319 110 HOH HOH . I 5 HOH B 20 320 112 HOH HOH . I 5 HOH B 21 321 83 HOH HOH . I 5 HOH B 22 322 38 HOH HOH . I 5 HOH B 23 323 40 HOH HOH . I 5 HOH B 24 324 78 HOH HOH . I 5 HOH B 25 325 130 HOH HOH . I 5 HOH B 26 326 64 HOH HOH . I 5 HOH B 27 327 25 HOH HOH . I 5 HOH B 28 328 48 HOH HOH . I 5 HOH B 29 329 3 HOH HOH . I 5 HOH B 30 330 66 HOH HOH . I 5 HOH B 31 331 56 HOH HOH . I 5 HOH B 32 332 120 HOH HOH . I 5 HOH B 33 333 94 HOH HOH . I 5 HOH B 34 334 4 HOH HOH . I 5 HOH B 35 335 47 HOH HOH . I 5 HOH B 36 336 119 HOH HOH . I 5 HOH B 37 337 73 HOH HOH . I 5 HOH B 38 338 30 HOH HOH . I 5 HOH B 39 339 52 HOH HOH . I 5 HOH B 40 340 49 HOH HOH . I 5 HOH B 41 341 102 HOH HOH . I 5 HOH B 42 342 115 HOH HOH . J 5 HOH C 1 301 43 HOH HOH . J 5 HOH C 2 302 81 HOH HOH . J 5 HOH C 3 303 5 HOH HOH . J 5 HOH C 4 304 114 HOH HOH . J 5 HOH C 5 305 109 HOH HOH . J 5 HOH C 6 306 85 HOH HOH . J 5 HOH C 7 307 90 HOH HOH . J 5 HOH C 8 308 122 HOH HOH . J 5 HOH C 9 309 31 HOH HOH . J 5 HOH C 10 310 129 HOH HOH . J 5 HOH C 11 311 92 HOH HOH . J 5 HOH C 12 312 23 HOH HOH . J 5 HOH C 13 313 1 HOH HOH . J 5 HOH C 14 314 118 HOH HOH . J 5 HOH C 15 315 20 HOH HOH . J 5 HOH C 16 316 93 HOH HOH . J 5 HOH C 17 317 10 HOH HOH . J 5 HOH C 18 318 84 HOH HOH . J 5 HOH C 19 319 22 HOH HOH . J 5 HOH C 20 320 24 HOH HOH . J 5 HOH C 21 321 127 HOH HOH . J 5 HOH C 22 322 39 HOH HOH . J 5 HOH C 23 323 107 HOH HOH . J 5 HOH C 24 324 62 HOH HOH . J 5 HOH C 25 325 104 HOH HOH . J 5 HOH C 26 326 50 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z -6.881 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 109.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 201 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #