data_7MEE # _model_server_result.job_id QAst_aXwaKwT4WWCiXTtuQ _model_server_result.datetime_utc '2024-11-16 07:31:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mee # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7MEE # _exptl.entry_id 7MEE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 267.26 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MEE _cell.length_a 123.323 _cell.length_b 123.323 _cell.length_c 123.323 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MEE _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 43 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 102 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CAN _struct_conn.ptnr2_label_comp_id NXL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NXL _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.415 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C7 H13 N3 O6 S' _chem_comp.formula_weight 267.26 _chem_comp.id NXL _chem_comp.mon_nstd_flag . _chem_comp.name (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'avibactam, bound form;NXL104, bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAK CAO NXL sing 260 n n CAJ CAO NXL sing 261 n n CAJ N NXL sing 262 n n OAL SAR NXL sing 263 n n CAO CAH NXL sing 264 n n CAN N NXL sing 265 n n CAN OAC NXL doub 266 n n OAG SAR NXL doub 267 n n N CA NXL sing 268 n n SAR OAE NXL doub 269 n n SAR OAD NXL sing 270 n n O C NXL doub 271 n n CAH CB NXL sing 272 n n CA C NXL sing 273 n n CA CB NXL sing 274 n n C NAA NXL sing 275 n n NAK OAL NXL sing 276 n n CAN H1 NXL sing 277 n n CAJ H2 NXL sing 278 n n CAJ H3 NXL sing 279 n n CA H4 NXL sing 280 n n NAA H5 NXL sing 281 n n NAA H6 NXL sing 282 n n CB H7 NXL sing 283 n n CB H8 NXL sing 284 n n CAH H9 NXL sing 285 n n CAH H10 NXL sing 286 n n CAO H11 NXL sing 287 n n NAK H12 NXL sing 288 n n OAD H13 NXL sing 289 n n # _atom_sites.entry_id 7MEE _atom_sites.fract_transf_matrix[1][1] 0.008109 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008109 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008109 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NXL A 1 401 401 NXL NXL . C 3 CO2 A 1 402 1 CO2 CO2 . D 4 SO4 A 1 403 2 SO4 SO4 . E 4 SO4 A 1 404 4 SO4 SO4 . F 4 SO4 A 1 405 6 SO4 SO4 . G 5 MPD A 1 406 1 MPD MPD . H 6 HOH A 1 501 150 HOH HOH . H 6 HOH A 2 502 141 HOH HOH . H 6 HOH A 3 503 135 HOH HOH . H 6 HOH A 4 504 148 HOH HOH . H 6 HOH A 5 505 48 HOH HOH . H 6 HOH A 6 506 78 HOH HOH . H 6 HOH A 7 507 129 HOH HOH . H 6 HOH A 8 508 101 HOH HOH . H 6 HOH A 9 509 13 HOH HOH . H 6 HOH A 10 510 111 HOH HOH . H 6 HOH A 11 511 152 HOH HOH . H 6 HOH A 12 512 43 HOH HOH . H 6 HOH A 13 513 65 HOH HOH . H 6 HOH A 14 514 116 HOH HOH . H 6 HOH A 15 515 85 HOH HOH . H 6 HOH A 16 516 17 HOH HOH . H 6 HOH A 17 517 58 HOH HOH . H 6 HOH A 18 518 39 HOH HOH . H 6 HOH A 19 519 24 HOH HOH . H 6 HOH A 20 520 41 HOH HOH . H 6 HOH A 21 521 50 HOH HOH . H 6 HOH A 22 522 155 HOH HOH . H 6 HOH A 23 523 109 HOH HOH . H 6 HOH A 24 524 54 HOH HOH . H 6 HOH A 25 525 8 HOH HOH . H 6 HOH A 26 526 19 HOH HOH . H 6 HOH A 27 527 143 HOH HOH . H 6 HOH A 28 528 98 HOH HOH . H 6 HOH A 29 529 31 HOH HOH . H 6 HOH A 30 530 29 HOH HOH . H 6 HOH A 31 531 46 HOH HOH . H 6 HOH A 32 532 139 HOH HOH . H 6 HOH A 33 533 149 HOH HOH . H 6 HOH A 34 534 80 HOH HOH . H 6 HOH A 35 535 113 HOH HOH . H 6 HOH A 36 536 82 HOH HOH . H 6 HOH A 37 537 144 HOH HOH . H 6 HOH A 38 538 10 HOH HOH . H 6 HOH A 39 539 136 HOH HOH . H 6 HOH A 40 540 26 HOH HOH . H 6 HOH A 41 541 32 HOH HOH . H 6 HOH A 42 542 92 HOH HOH . H 6 HOH A 43 543 72 HOH HOH . H 6 HOH A 44 544 115 HOH HOH . H 6 HOH A 45 545 124 HOH HOH . H 6 HOH A 46 546 16 HOH HOH . H 6 HOH A 47 547 22 HOH HOH . H 6 HOH A 48 548 55 HOH HOH . H 6 HOH A 49 549 35 HOH HOH . H 6 HOH A 50 550 137 HOH HOH . H 6 HOH A 51 551 12 HOH HOH . H 6 HOH A 52 552 103 HOH HOH . H 6 HOH A 53 553 118 HOH HOH . H 6 HOH A 54 554 36 HOH HOH . H 6 HOH A 55 555 99 HOH HOH . H 6 HOH A 56 556 81 HOH HOH . H 6 HOH A 57 557 18 HOH HOH . H 6 HOH A 58 558 33 HOH HOH . H 6 HOH A 59 559 91 HOH HOH . H 6 HOH A 60 560 14 HOH HOH . H 6 HOH A 61 561 106 HOH HOH . H 6 HOH A 62 562 27 HOH HOH . H 6 HOH A 63 563 122 HOH HOH . H 6 HOH A 64 564 52 HOH HOH . H 6 HOH A 65 565 30 HOH HOH . H 6 HOH A 66 566 120 HOH HOH . H 6 HOH A 67 567 21 HOH HOH . H 6 HOH A 68 568 94 HOH HOH . H 6 HOH A 69 569 119 HOH HOH . H 6 HOH A 70 570 15 HOH HOH . H 6 HOH A 71 571 25 HOH HOH . H 6 HOH A 72 572 74 HOH HOH . H 6 HOH A 73 573 60 HOH HOH . H 6 HOH A 74 574 107 HOH HOH . H 6 HOH A 75 575 5 HOH HOH . H 6 HOH A 76 576 110 HOH HOH . H 6 HOH A 77 577 104 HOH HOH . H 6 HOH A 78 578 79 HOH HOH . H 6 HOH A 79 579 11 HOH HOH . H 6 HOH A 80 580 9 HOH HOH . H 6 HOH A 81 581 34 HOH HOH . H 6 HOH A 82 582 147 HOH HOH . H 6 HOH A 83 583 126 HOH HOH . H 6 HOH A 84 584 123 HOH HOH . H 6 HOH A 85 585 42 HOH HOH . H 6 HOH A 86 586 114 HOH HOH . H 6 HOH A 87 587 102 HOH HOH . H 6 HOH A 88 588 100 HOH HOH . H 6 HOH A 89 589 146 HOH HOH . H 6 HOH A 90 590 38 HOH HOH . H 6 HOH A 91 591 66 HOH HOH . H 6 HOH A 92 592 47 HOH HOH . H 6 HOH A 93 593 73 HOH HOH . H 6 HOH A 94 594 63 HOH HOH . H 6 HOH A 95 595 51 HOH HOH . H 6 HOH A 96 596 45 HOH HOH . H 6 HOH A 97 597 117 HOH HOH . H 6 HOH A 98 598 142 HOH HOH . H 6 HOH A 99 599 40 HOH HOH . H 6 HOH A 100 600 61 HOH HOH . H 6 HOH A 101 601 90 HOH HOH . H 6 HOH A 102 602 7 HOH HOH . H 6 HOH A 103 603 67 HOH HOH . H 6 HOH A 104 604 3 HOH HOH . H 6 HOH A 105 605 44 HOH HOH . H 6 HOH A 106 606 156 HOH HOH . H 6 HOH A 107 607 95 HOH HOH . H 6 HOH A 108 608 23 HOH HOH . H 6 HOH A 109 609 105 HOH HOH . H 6 HOH A 110 610 28 HOH HOH . H 6 HOH A 111 611 57 HOH HOH . H 6 HOH A 112 612 83 HOH HOH . H 6 HOH A 113 613 97 HOH HOH . H 6 HOH A 114 614 88 HOH HOH . H 6 HOH A 115 615 70 HOH HOH . H 6 HOH A 116 616 96 HOH HOH . H 6 HOH A 117 617 134 HOH HOH . H 6 HOH A 118 618 138 HOH HOH . H 6 HOH A 119 619 84 HOH HOH . H 6 HOH A 120 620 53 HOH HOH . H 6 HOH A 121 621 128 HOH HOH . H 6 HOH A 122 622 130 HOH HOH . H 6 HOH A 123 623 151 HOH HOH . H 6 HOH A 124 624 62 HOH HOH . H 6 HOH A 125 625 132 HOH HOH . H 6 HOH A 126 626 77 HOH HOH . H 6 HOH A 127 627 75 HOH HOH . H 6 HOH A 128 628 154 HOH HOH . H 6 HOH A 129 629 87 HOH HOH . H 6 HOH A 130 630 71 HOH HOH . H 6 HOH A 131 631 59 HOH HOH . H 6 HOH A 132 632 56 HOH HOH . H 6 HOH A 133 633 76 HOH HOH . H 6 HOH A 134 634 93 HOH HOH . H 6 HOH A 135 635 153 HOH HOH . H 6 HOH A 136 636 127 HOH HOH . H 6 HOH A 137 637 6 HOH HOH . H 6 HOH A 138 638 89 HOH HOH . H 6 HOH A 139 639 4 HOH HOH . H 6 HOH A 140 640 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC NXL . . . B 2 16.172 23.348 -8.988 0.92 31.38 ? OAC NXL 401 A 1 HETATM 2 C CAN NXL . . . B 2 15.634 22.875 -7.989 0.92 40.75 ? CAN NXL 401 A 1 HETATM 3 N N NXL . . . B 2 15.721 23.38 -6.827 0.92 37.25 ? N NXL 401 A 1 HETATM 4 C CAJ NXL . . . B 2 14.634 23.24 -5.857 0.92 32.62 ? CAJ NXL 401 A 1 HETATM 5 C CA NXL . . . B 2 16.901 24.122 -6.37 0.92 39.89 ? CA NXL 401 A 1 HETATM 6 C C NXL . . . B 2 17.631 23.504 -5.21 0.92 38.72 ? C NXL 401 A 1 HETATM 7 O O NXL . . . B 2 17.248 22.458 -4.728 0.92 43.81 ? O NXL 401 A 1 HETATM 8 N NAA NXL . . . B 2 18.704 24.116 -4.72 0.92 48.47 ? NAA NXL 401 A 1 HETATM 9 C CB NXL . . . B 2 16.44 25.526 -5.996 0.92 45.3 ? CB NXL 401 A 1 HETATM 10 C CAH NXL . . . B 2 15.144 25.57 -5.177 0.92 42.56 ? CAH NXL 401 A 1 HETATM 11 C CAO NXL . . . B 2 14.042 24.64 -5.695 0.92 33.1 ? CAO NXL 401 A 1 HETATM 12 N NAK NXL . . . B 2 13.39 25.101 -6.96 0.92 45.25 ? NAK NXL 401 A 1 HETATM 13 O OAL NXL . . . B 2 14.158 25.781 -7.851 0.92 57.33 ? OAL NXL 401 A 1 HETATM 14 S SAR NXL . . . B 2 13.506 26.576 -9.012 0.92 50.73 ? SAR NXL 401 A 1 HETATM 15 O OAD NXL . . . B 2 12.932 28.009 -8.452 0.92 55.76 ? OAD NXL 401 A 1 HETATM 16 O OAE NXL . . . B 2 12.44 25.773 -9.552 0.92 48.85 ? OAE NXL 401 A 1 HETATM 17 O OAG NXL . . . B 2 14.434 26.857 -10.074 0.92 41.88 ? OAG NXL 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #