data_7MFV # _model_server_result.job_id oo8dvOzG_cZasXtfRKVjaw _model_server_result.datetime_utc '2024-11-23 22:14:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mfv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7MFV # _exptl.entry_id 7MFV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7MFV _cell.length_a 68.92 _cell.length_b 68.92 _cell.length_c 107.17 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MFV _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall 'P 6c 2c' _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 B CYS 22 1_555 A SG CYS 97 B CYS 97 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 22 B CYS 22 1_555 A SG CYS 97 B CYS 97 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7MFV _atom_sites.fract_transf_matrix[1][1] 0.01451 _atom_sites.fract_transf_matrix[1][2] 0.008377 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016754 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009331 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO B 1 201 1 EDO EDO . C 3 HOH B 1 301 42 HOH HOH . C 3 HOH B 2 302 23 HOH HOH . C 3 HOH B 3 303 70 HOH HOH . C 3 HOH B 4 304 25 HOH HOH . C 3 HOH B 5 305 30 HOH HOH . C 3 HOH B 6 306 40 HOH HOH . C 3 HOH B 7 307 58 HOH HOH . C 3 HOH B 8 308 66 HOH HOH . C 3 HOH B 9 309 69 HOH HOH . C 3 HOH B 10 310 10 HOH HOH . C 3 HOH B 11 311 27 HOH HOH . C 3 HOH B 12 312 67 HOH HOH . C 3 HOH B 13 313 47 HOH HOH . C 3 HOH B 14 314 26 HOH HOH . C 3 HOH B 15 315 29 HOH HOH . C 3 HOH B 16 316 18 HOH HOH . C 3 HOH B 17 317 19 HOH HOH . C 3 HOH B 18 318 50 HOH HOH . C 3 HOH B 19 319 44 HOH HOH . C 3 HOH B 20 320 39 HOH HOH . C 3 HOH B 21 321 1 HOH HOH . C 3 HOH B 22 322 6 HOH HOH . C 3 HOH B 23 323 20 HOH HOH . C 3 HOH B 24 324 68 HOH HOH . C 3 HOH B 25 325 46 HOH HOH . C 3 HOH B 26 326 13 HOH HOH . C 3 HOH B 27 327 60 HOH HOH . C 3 HOH B 28 328 2 HOH HOH . C 3 HOH B 29 329 3 HOH HOH . C 3 HOH B 30 330 7 HOH HOH . C 3 HOH B 31 331 21 HOH HOH . C 3 HOH B 32 332 15 HOH HOH . C 3 HOH B 33 333 59 HOH HOH . C 3 HOH B 34 334 8 HOH HOH . C 3 HOH B 35 335 31 HOH HOH . C 3 HOH B 36 336 11 HOH HOH . C 3 HOH B 37 337 24 HOH HOH . C 3 HOH B 38 338 9 HOH HOH . C 3 HOH B 39 339 17 HOH HOH . C 3 HOH B 40 340 52 HOH HOH . C 3 HOH B 41 341 35 HOH HOH . C 3 HOH B 42 342 49 HOH HOH . C 3 HOH B 43 343 38 HOH HOH . C 3 HOH B 44 344 22 HOH HOH . C 3 HOH B 45 345 36 HOH HOH . C 3 HOH B 46 346 16 HOH HOH . C 3 HOH B 47 347 28 HOH HOH . C 3 HOH B 48 348 12 HOH HOH . C 3 HOH B 49 349 64 HOH HOH . C 3 HOH B 50 350 63 HOH HOH . C 3 HOH B 51 351 14 HOH HOH . C 3 HOH B 52 352 37 HOH HOH . C 3 HOH B 53 353 5 HOH HOH . C 3 HOH B 54 354 62 HOH HOH . C 3 HOH B 55 355 4 HOH HOH . C 3 HOH B 56 356 57 HOH HOH . C 3 HOH B 57 357 41 HOH HOH . C 3 HOH B 58 358 55 HOH HOH . C 3 HOH B 59 359 65 HOH HOH . C 3 HOH B 60 360 32 HOH HOH . C 3 HOH B 61 361 51 HOH HOH . C 3 HOH B 62 362 56 HOH HOH . C 3 HOH B 63 363 48 HOH HOH . C 3 HOH B 64 364 34 HOH HOH . C 3 HOH B 65 365 43 HOH HOH . C 3 HOH B 66 366 61 HOH HOH . C 3 HOH B 67 367 53 HOH HOH . C 3 HOH B 68 368 33 HOH HOH . C 3 HOH B 69 369 45 HOH HOH . C 3 HOH B 70 370 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 23.966 24.934 24.281 1 47.2 ? C1 EDO 201 B 1 HETATM 2 O O1 EDO . . . B 2 24.568 26.171 24.673 1 59.15 ? O1 EDO 201 B 1 HETATM 3 C C2 EDO . . . B 2 24.197 23.913 25.387 1 59.74 ? C2 EDO 201 B 1 HETATM 4 O O2 EDO . . . B 2 23.627 22.653 25.011 1 62.11 ? O2 EDO 201 B 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #