data_7MFY # _model_server_result.job_id HCBDUQFPtUmAruVROLULKQ _model_server_result.datetime_utc '2024-11-15 09:27:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mfy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7MFY # _exptl.entry_id 7MFY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.981 _cell.angle_gamma 90 _cell.entry_id 7MFY _cell.length_a 28.918 _cell.length_b 66.617 _cell.length_c 63.262 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MFY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 108 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 108 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C01 _struct_conn.ptnr2_label_comp_id ZFG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ZFG _struct_conn.ptnr2_auth_seq_id 202 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.427 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 135 n n C1 C2 GOL sing 136 n n C1 H11 GOL sing 137 n n C1 H12 GOL sing 138 n n O1 HO1 GOL sing 139 n n C2 O2 GOL sing 140 n n C2 C3 GOL sing 141 n n C2 H2 GOL sing 142 n n O2 HO2 GOL sing 143 n n C3 O3 GOL sing 144 n n C3 H31 GOL sing 145 n n C3 H32 GOL sing 146 n n O3 HO3 GOL sing 147 n n # _atom_sites.entry_id 7MFY _atom_sites.fract_transf_matrix[1][1] 0.034581 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000592 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015011 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01581 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 201 2 ACT ACT . C 3 ZFG A 1 202 1 ZFG THL . D 4 GOL A 1 203 1 GOL GOL . E 4 GOL A 1 204 2 GOL GOL . F 4 GOL A 1 205 3 GOL GOL . G 5 HOH A 1 301 94 HOH HOH . G 5 HOH A 2 302 181 HOH HOH . G 5 HOH A 3 303 95 HOH HOH . G 5 HOH A 4 304 69 HOH HOH . G 5 HOH A 5 305 151 HOH HOH . G 5 HOH A 6 306 126 HOH HOH . G 5 HOH A 7 307 96 HOH HOH . G 5 HOH A 8 308 104 HOH HOH . G 5 HOH A 9 309 118 HOH HOH . G 5 HOH A 10 310 103 HOH HOH . G 5 HOH A 11 311 110 HOH HOH . G 5 HOH A 12 312 93 HOH HOH . G 5 HOH A 13 313 9 HOH HOH . G 5 HOH A 14 314 26 HOH HOH . G 5 HOH A 15 315 97 HOH HOH . G 5 HOH A 16 316 182 HOH HOH . G 5 HOH A 17 317 59 HOH HOH . G 5 HOH A 18 318 144 HOH HOH . G 5 HOH A 19 319 172 HOH HOH . G 5 HOH A 20 320 105 HOH HOH . G 5 HOH A 21 321 99 HOH HOH . G 5 HOH A 22 322 107 HOH HOH . G 5 HOH A 23 323 106 HOH HOH . G 5 HOH A 24 324 56 HOH HOH . G 5 HOH A 25 325 159 HOH HOH . G 5 HOH A 26 326 51 HOH HOH . G 5 HOH A 27 327 68 HOH HOH . G 5 HOH A 28 328 98 HOH HOH . G 5 HOH A 29 329 169 HOH HOH . G 5 HOH A 30 330 128 HOH HOH . G 5 HOH A 31 331 5 HOH HOH . G 5 HOH A 32 332 108 HOH HOH . G 5 HOH A 33 333 10 HOH HOH . G 5 HOH A 34 334 30 HOH HOH . G 5 HOH A 35 335 18 HOH HOH . G 5 HOH A 36 336 143 HOH HOH . G 5 HOH A 37 337 16 HOH HOH . G 5 HOH A 38 338 19 HOH HOH . G 5 HOH A 39 339 129 HOH HOH . G 5 HOH A 40 340 136 HOH HOH . G 5 HOH A 41 341 45 HOH HOH . G 5 HOH A 42 342 41 HOH HOH . G 5 HOH A 43 343 36 HOH HOH . G 5 HOH A 44 344 60 HOH HOH . G 5 HOH A 45 345 35 HOH HOH . G 5 HOH A 46 346 38 HOH HOH . G 5 HOH A 47 347 23 HOH HOH . G 5 HOH A 48 348 27 HOH HOH . G 5 HOH A 49 349 8 HOH HOH . G 5 HOH A 50 350 47 HOH HOH . G 5 HOH A 51 351 132 HOH HOH . G 5 HOH A 52 352 154 HOH HOH . G 5 HOH A 53 353 25 HOH HOH . G 5 HOH A 54 354 64 HOH HOH . G 5 HOH A 55 355 28 HOH HOH . G 5 HOH A 56 356 168 HOH HOH . G 5 HOH A 57 357 15 HOH HOH . G 5 HOH A 58 358 37 HOH HOH . G 5 HOH A 59 359 82 HOH HOH . G 5 HOH A 60 360 117 HOH HOH . G 5 HOH A 61 361 115 HOH HOH . G 5 HOH A 62 362 130 HOH HOH . G 5 HOH A 63 363 167 HOH HOH . G 5 HOH A 64 364 29 HOH HOH . G 5 HOH A 65 365 158 HOH HOH . G 5 HOH A 66 366 65 HOH HOH . G 5 HOH A 67 367 13 HOH HOH . G 5 HOH A 68 368 46 HOH HOH . G 5 HOH A 69 369 40 HOH HOH . G 5 HOH A 70 370 7 HOH HOH . G 5 HOH A 71 371 178 HOH HOH . G 5 HOH A 72 372 67 HOH HOH . G 5 HOH A 73 373 109 HOH HOH . G 5 HOH A 74 374 24 HOH HOH . G 5 HOH A 75 375 11 HOH HOH . G 5 HOH A 76 376 4 HOH HOH . G 5 HOH A 77 377 76 HOH HOH . G 5 HOH A 78 378 2 HOH HOH . G 5 HOH A 79 379 102 HOH HOH . G 5 HOH A 80 380 101 HOH HOH . G 5 HOH A 81 381 135 HOH HOH . G 5 HOH A 82 382 73 HOH HOH . G 5 HOH A 83 383 42 HOH HOH . G 5 HOH A 84 384 39 HOH HOH . G 5 HOH A 85 385 121 HOH HOH . G 5 HOH A 86 386 83 HOH HOH . G 5 HOH A 87 387 22 HOH HOH . G 5 HOH A 88 388 176 HOH HOH . G 5 HOH A 89 389 43 HOH HOH . G 5 HOH A 90 390 125 HOH HOH . G 5 HOH A 91 391 34 HOH HOH . G 5 HOH A 92 392 140 HOH HOH . G 5 HOH A 93 393 116 HOH HOH . G 5 HOH A 94 394 31 HOH HOH . G 5 HOH A 95 395 14 HOH HOH . G 5 HOH A 96 396 87 HOH HOH . G 5 HOH A 97 397 20 HOH HOH . G 5 HOH A 98 398 12 HOH HOH . G 5 HOH A 99 399 156 HOH HOH . G 5 HOH A 100 400 124 HOH HOH . G 5 HOH A 101 401 113 HOH HOH . G 5 HOH A 102 402 61 HOH HOH . G 5 HOH A 103 403 70 HOH HOH . G 5 HOH A 104 404 32 HOH HOH . G 5 HOH A 105 405 148 HOH HOH . G 5 HOH A 106 406 81 HOH HOH . G 5 HOH A 107 407 80 HOH HOH . G 5 HOH A 108 408 33 HOH HOH . G 5 HOH A 109 409 123 HOH HOH . G 5 HOH A 110 410 52 HOH HOH . G 5 HOH A 111 411 66 HOH HOH . G 5 HOH A 112 412 6 HOH HOH . G 5 HOH A 113 413 112 HOH HOH . G 5 HOH A 114 414 139 HOH HOH . G 5 HOH A 115 415 1 HOH HOH . G 5 HOH A 116 416 84 HOH HOH . G 5 HOH A 117 417 120 HOH HOH . G 5 HOH A 118 418 122 HOH HOH . G 5 HOH A 119 419 74 HOH HOH . G 5 HOH A 120 420 78 HOH HOH . G 5 HOH A 121 421 63 HOH HOH . G 5 HOH A 122 422 17 HOH HOH . G 5 HOH A 123 423 79 HOH HOH . G 5 HOH A 124 424 131 HOH HOH . G 5 HOH A 125 425 134 HOH HOH . G 5 HOH A 126 426 3 HOH HOH . G 5 HOH A 127 427 160 HOH HOH . G 5 HOH A 128 428 153 HOH HOH . G 5 HOH A 129 429 150 HOH HOH . G 5 HOH A 130 430 92 HOH HOH . G 5 HOH A 131 431 114 HOH HOH . G 5 HOH A 132 432 138 HOH HOH . G 5 HOH A 133 433 88 HOH HOH . G 5 HOH A 134 434 147 HOH HOH . G 5 HOH A 135 435 127 HOH HOH . G 5 HOH A 136 436 133 HOH HOH . G 5 HOH A 137 437 162 HOH HOH . G 5 HOH A 138 438 119 HOH HOH . G 5 HOH A 139 439 137 HOH HOH . G 5 HOH A 140 440 166 HOH HOH . G 5 HOH A 141 441 163 HOH HOH . G 5 HOH A 142 442 183 HOH HOH . G 5 HOH A 143 443 90 HOH HOH . G 5 HOH A 144 444 48 HOH HOH . G 5 HOH A 145 445 155 HOH HOH . G 5 HOH A 146 446 86 HOH HOH . G 5 HOH A 147 447 89 HOH HOH . G 5 HOH A 148 448 49 HOH HOH . G 5 HOH A 149 449 71 HOH HOH . G 5 HOH A 150 450 149 HOH HOH . G 5 HOH A 151 451 173 HOH HOH . G 5 HOH A 152 452 142 HOH HOH . G 5 HOH A 153 453 170 HOH HOH . G 5 HOH A 154 454 62 HOH HOH . G 5 HOH A 155 455 44 HOH HOH . G 5 HOH A 156 456 171 HOH HOH . G 5 HOH A 157 457 54 HOH HOH . G 5 HOH A 158 458 161 HOH HOH . G 5 HOH A 159 459 179 HOH HOH . G 5 HOH A 160 460 53 HOH HOH . G 5 HOH A 161 461 55 HOH HOH . G 5 HOH A 162 462 77 HOH HOH . G 5 HOH A 163 463 72 HOH HOH . G 5 HOH A 164 464 100 HOH HOH . G 5 HOH A 165 465 58 HOH HOH . G 5 HOH A 166 466 75 HOH HOH . G 5 HOH A 167 467 152 HOH HOH . G 5 HOH A 168 468 111 HOH HOH . G 5 HOH A 169 469 165 HOH HOH . G 5 HOH A 170 470 177 HOH HOH . G 5 HOH A 171 471 141 HOH HOH . G 5 HOH A 172 472 164 HOH HOH . G 5 HOH A 173 473 85 HOH HOH . G 5 HOH A 174 474 185 HOH HOH . G 5 HOH A 175 475 184 HOH HOH . G 5 HOH A 176 476 91 HOH HOH . G 5 HOH A 177 477 157 HOH HOH . G 5 HOH A 178 478 174 HOH HOH . G 5 HOH A 179 479 145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 -13.397 9.465 24.734 1 28.92 ? C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . D 4 -12.471 9.26 25.781 1 16.53 ? O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . D 4 -13.792 8.071 24.182 1 34.68 ? C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . D 4 -12.682 7.282 23.942 1 34.61 ? O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . D 4 -14.62 8.351 22.894 1 36.85 ? C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . D 4 -15.406 7.215 22.635 1 26.25 ? O3 GOL 203 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #