data_7MFZ # _model_server_result.job_id uPTXJkJdK-hYKAzOtl0Znw _model_server_result.datetime_utc '2024-11-17 18:57:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mfz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":204}' # _entry.id 7MFZ # _exptl.entry_id 7MFZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 269.404 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-{5-[(2E)-but-2-en-2-yl]thiophen-2-yl}phenyl)azetidine _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MFZ _cell.length_a 36.932 _cell.length_b 102.41 _cell.length_c 108.478 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MFZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 108 A LYS 108 1_555 D C19 ZFP . A ZFP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.266 ? covale ? covale2 B NZ LYS 108 B LYS 108 1_555 F C19 ZFP . B ZFP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.245 ? covale ? covale3 C NZ LYS 108 C LYS 108 1_555 J C19 ZFP . C ZFP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.258 ? # _chem_comp.formula 'C17 H19 N S' _chem_comp.formula_weight 269.404 _chem_comp.id ZFP _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-{5-[(2E)-but-2-en-2-yl]thiophen-2-yl}phenyl)azetidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C16 ZFP sing 378 n n C19 C18 ZFP sing 379 n n C16 C18 ZFP doub 380 e n C16 C13 ZFP sing 381 n n C14 C13 ZFP doub 382 n y C14 C15 ZFP sing 383 n y C13 S12 ZFP sing 384 n y C15 C07 ZFP doub 385 n y S12 C07 ZFP sing 386 n y C07 C01 ZFP sing 387 n n C02 C01 ZFP doub 388 n y C02 C03 ZFP sing 389 n y C01 C06 ZFP sing 390 n y C03 C04 ZFP doub 391 n y C06 C05 ZFP doub 392 n y C04 C05 ZFP sing 393 n y C04 N08 ZFP sing 394 n n N08 C11 ZFP sing 395 n n N08 C09 ZFP sing 396 n n C11 C10 ZFP sing 397 n n C09 C10 ZFP sing 398 n n C10 H1 ZFP sing 399 n n C10 H2 ZFP sing 400 n n C15 H3 ZFP sing 401 n n C17 H4 ZFP sing 402 n n C17 H5 ZFP sing 403 n n C17 H6 ZFP sing 404 n n C02 H7 ZFP sing 405 n n C03 H8 ZFP sing 406 n n C05 H9 ZFP sing 407 n n C06 H10 ZFP sing 408 n n C09 H11 ZFP sing 409 n n C09 H12 ZFP sing 410 n n C11 H13 ZFP sing 411 n n C11 H14 ZFP sing 412 n n C14 H15 ZFP sing 413 n n C18 H16 ZFP sing 414 n n C19 H17 ZFP sing 415 n n C19 H18 ZFP sing 416 n n C19 H19 ZFP sing 417 n n # _atom_sites.entry_id 7MFZ _atom_sites.fract_transf_matrix[1][1] 0.027077 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009765 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009218 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZFP A 1 201 3 ZFP LIG . E 3 ACT B 1 201 7 ACT ACT . F 2 ZFP B 1 202 5 ZFP LIG . G 3 ACT C 1 201 6 ACT ACT . H 4 GOL C 1 202 2 GOL GOL . I 4 GOL C 1 203 3 GOL GOL . J 2 ZFP C 1 204 1 ZFP LIG . K 5 HOH A 1 301 79 HOH HOH . K 5 HOH A 2 302 27 HOH HOH . K 5 HOH A 3 303 69 HOH HOH . K 5 HOH A 4 304 14 HOH HOH . K 5 HOH A 5 305 22 HOH HOH . K 5 HOH A 6 306 15 HOH HOH . K 5 HOH A 7 307 77 HOH HOH . K 5 HOH A 8 308 43 HOH HOH . K 5 HOH A 9 309 45 HOH HOH . K 5 HOH A 10 310 81 HOH HOH . K 5 HOH A 11 311 7 HOH HOH . K 5 HOH A 12 312 1 HOH HOH . K 5 HOH A 13 313 6 HOH HOH . K 5 HOH A 14 314 74 HOH HOH . K 5 HOH A 15 315 3 HOH HOH . K 5 HOH A 16 316 73 HOH HOH . K 5 HOH A 17 317 38 HOH HOH . K 5 HOH A 18 318 9 HOH HOH . K 5 HOH A 19 319 2 HOH HOH . K 5 HOH A 20 320 82 HOH HOH . K 5 HOH A 21 321 18 HOH HOH . K 5 HOH A 22 322 8 HOH HOH . K 5 HOH A 23 323 62 HOH HOH . K 5 HOH A 24 324 78 HOH HOH . K 5 HOH A 25 325 36 HOH HOH . K 5 HOH A 26 326 44 HOH HOH . L 5 HOH B 1 301 86 HOH HOH . L 5 HOH B 2 302 50 HOH HOH . L 5 HOH B 3 303 65 HOH HOH . L 5 HOH B 4 304 84 HOH HOH . L 5 HOH B 5 305 96 HOH HOH . L 5 HOH B 6 306 17 HOH HOH . L 5 HOH B 7 307 19 HOH HOH . L 5 HOH B 8 308 93 HOH HOH . L 5 HOH B 9 309 92 HOH HOH . L 5 HOH B 10 310 48 HOH HOH . L 5 HOH B 11 311 87 HOH HOH . L 5 HOH B 12 312 56 HOH HOH . L 5 HOH B 13 313 21 HOH HOH . L 5 HOH B 14 314 97 HOH HOH . L 5 HOH B 15 315 12 HOH HOH . L 5 HOH B 16 316 20 HOH HOH . L 5 HOH B 17 317 53 HOH HOH . L 5 HOH B 18 318 71 HOH HOH . L 5 HOH B 19 319 57 HOH HOH . L 5 HOH B 20 320 83 HOH HOH . L 5 HOH B 21 321 25 HOH HOH . L 5 HOH B 22 322 52 HOH HOH . L 5 HOH B 23 323 16 HOH HOH . L 5 HOH B 24 324 23 HOH HOH . M 5 HOH C 1 301 68 HOH HOH . M 5 HOH C 2 302 41 HOH HOH . M 5 HOH C 3 303 102 HOH HOH . M 5 HOH C 4 304 28 HOH HOH . M 5 HOH C 5 305 11 HOH HOH . M 5 HOH C 6 306 61 HOH HOH . M 5 HOH C 7 307 33 HOH HOH . M 5 HOH C 8 308 32 HOH HOH . M 5 HOH C 9 309 101 HOH HOH . M 5 HOH C 10 310 64 HOH HOH . M 5 HOH C 11 311 35 HOH HOH . M 5 HOH C 12 312 94 HOH HOH . M 5 HOH C 13 313 88 HOH HOH . M 5 HOH C 14 314 34 HOH HOH . M 5 HOH C 15 315 85 HOH HOH . M 5 HOH C 16 316 37 HOH HOH . M 5 HOH C 17 317 5 HOH HOH . M 5 HOH C 18 318 95 HOH HOH . M 5 HOH C 19 319 31 HOH HOH . M 5 HOH C 20 320 66 HOH HOH . M 5 HOH C 21 321 80 HOH HOH . M 5 HOH C 22 322 67 HOH HOH . M 5 HOH C 23 323 89 HOH HOH . M 5 HOH C 24 324 4 HOH HOH . M 5 HOH C 25 325 54 HOH HOH . M 5 HOH C 26 326 42 HOH HOH . M 5 HOH C 27 327 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 ZFP . . . J 2 52.656 24.547 -33.502 1 57.42 ? C10 ZFP 204 C 1 HETATM 2 C C13 ZFP . . . J 2 58.49 23.88 -41.842 1 58.51 ? C13 ZFP 204 C 1 HETATM 3 C C15 ZFP . . . J 2 56.434 23.683 -40.703 1 53.16 ? C15 ZFP 204 C 1 HETATM 4 C C17 ZFP . . . J 2 58.634 23.609 -44.358 1 53.82 ? C17 ZFP 204 C 1 HETATM 5 C C01 ZFP . . . J 2 56.52 24.318 -38.231 1 50.32 ? C01 ZFP 204 C 1 HETATM 6 C C02 ZFP . . . J 2 55.212 24.915 -38.256 1 53.37 ? C02 ZFP 204 C 1 HETATM 7 C C03 ZFP . . . J 2 54.518 25.096 -37.087 1 54.72 ? C03 ZFP 204 C 1 HETATM 8 C C04 ZFP . . . J 2 55.067 24.688 -35.909 1 58.98 ? C04 ZFP 204 C 1 HETATM 9 C C05 ZFP . . . J 2 56.346 24.077 -35.883 1 52.74 ? C05 ZFP 204 C 1 HETATM 10 C C06 ZFP . . . J 2 57.06 23.895 -37.072 1 52.24 ? C06 ZFP 204 C 1 HETATM 11 C C07 ZFP . . . J 2 57.203 24.135 -39.635 1 48.56 ? C07 ZFP 204 C 1 HETATM 12 C C09 ZFP . . . J 2 54.011 24.045 -33.529 1 58.07 ? C09 ZFP 204 C 1 HETATM 13 C C11 ZFP . . . J 2 53.025 25.564 -34.529 1 53.31 ? C11 ZFP 204 C 1 HETATM 14 C C14 ZFP . . . J 2 57.144 23.528 -41.941 1 54.59 ? C14 ZFP 204 C 1 HETATM 15 C C16 ZFP . . . J 2 59.358 23.759 -43.026 1 55.52 ? C16 ZFP 204 C 1 HETATM 16 C C18 ZFP . . . J 2 60.705 23.739 -42.985 1 54.7 ? C18 ZFP 204 C 1 HETATM 17 C C19 ZFP . . . J 2 61.431 23.538 -44.267 1 55.01 ? C19 ZFP 204 C 1 HETATM 18 N N08 ZFP . . . J 2 54.297 24.887 -34.744 1 62.55 ? N08 ZFP 204 C 1 HETATM 19 S S12 ZFP . . . J 2 58.777 24.335 -40.231 1 63.44 ? S12 ZFP 204 C 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 692 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 19 #