data_7MG8
#
_model_server_result.job_id            2mc8klzeOBpz3sysMUVFgQ 
_model_server_result.datetime_utc      '2024-11-28 00:17:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mg8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":101}' 
#
_entry.id    7MG8 
#
_exptl.entry_id    7MG8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              300.351 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-{[2-(2-hydroxyethoxy)ethyl]amino}-4-[(6-hydroxyhexyl)amino]cyclobut-3-ene-1,2-dione 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7MG8 
_cell.length_a            66.419 
_cell.length_b            69.92 
_cell.length_c            125.869 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MG8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 K N N 
? 6 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 G C1 MAN . A MAN 303 1_555 K O6 SQ0 . C SQ0 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.403 ? 
covale ? covale2 J C1 MAN . B MAN 303 1_555 L O6 SQ0 . D SQ0 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.398 ? 
covale ? covale3 C P DC 1 C DC 1 1_555 K O4 SQ0 . C SQ0 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.525 ? 
covale ? covale4 D P DC 1 D DC 1 1_555 L O4 SQ0 . D SQ0 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.608 ? 
metalc ? metalc1 A OE2 GLU 8 A GLU 8 1_555 E MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? 
metalc ? metalc2 A OD2 ASP 10 A ASP 10 1_555 E MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
metalc ? metalc3 A OD1 ASP 10 A ASP 10 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc4 A OD2 ASP 10 A ASP 10 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc5 A O TYR 12 A TYR 12 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc6 A OD1 ASN 14 A ASN 14 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc7 A OD1 ASP 19 A ASP 19 1_555 E MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc8 A OD2 ASP 19 A ASP 19 1_555 F CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc9 A NE2 HIS 24 A HIS 24 1_555 E MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc10 B OE2 GLU 8 B GLU 8 1_555 H MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? 
metalc ? metalc11 B OD2 ASP 10 B ASP 10 1_555 H MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc12 B OD1 ASP 10 B ASP 10 1_555 I CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc13 B OD2 ASP 10 B ASP 10 1_555 I CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc14 B O TYR 12 B TYR 12 1_555 I CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? 
metalc ? metalc15 B OD1 ASN 14 B ASN 14 1_555 I CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc16 B OD1 ASP 19 B ASP 19 1_555 H MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? 
metalc ? metalc17 B OD2 ASP 19 B ASP 19 1_555 I CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc18 B NE2 HIS 24 B HIS 24 1_555 H MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
#
_chem_comp.formula           'C14 H24 N2 O5' 
_chem_comp.formula_weight    300.351 
_chem_comp.id                SQ0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-{[2-(2-hydroxyethoxy)ethyl]amino}-4-[(6-hydroxyhexyl)amino]cyclobut-3-ene-1,2-dione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O6 C1 SQ0 sing 375 n n 
C1 C2 SQ0 sing 376 n n 
O1 C2 SQ0 sing 377 n n 
O1 C3 SQ0 sing 378 n n 
O2 C8 SQ0 doub 379 n n 
C3 C4 SQ0 sing 380 n n 
C8 C7 SQ0 sing 381 n n 
C8 C5 SQ0 sing 382 n n 
C4 N1 SQ0 sing 383 n n 
O3 C7 SQ0 doub 384 n n 
C7 C6 SQ0 sing 385 n n 
C5 N1 SQ0 sing 386 n n 
C5 C6 SQ0 doub 387 n n 
C6 N2 SQ0 sing 388 n n 
N2 C14 SQ0 sing 389 n n 
C14 C13 SQ0 sing 390 n n 
C13 C12 SQ0 sing 391 n n 
C12 C11 SQ0 sing 392 n n 
C11 C10 SQ0 sing 393 n n 
C10 C9 SQ0 sing 394 n n 
C9 O4 SQ0 sing 395 n n 
C1 H1 SQ0 sing 396 n n 
C1 H2 SQ0 sing 397 n n 
C2 H3 SQ0 sing 398 n n 
C2 H4 SQ0 sing 399 n n 
C3 H5 SQ0 sing 400 n n 
C3 H6 SQ0 sing 401 n n 
C4 H7 SQ0 sing 402 n n 
C4 H8 SQ0 sing 403 n n 
N1 H9 SQ0 sing 404 n n 
O4 H10 SQ0 sing 405 n n 
C9 H11 SQ0 sing 406 n n 
C9 H12 SQ0 sing 407 n n 
C10 H13 SQ0 sing 408 n n 
C10 H14 SQ0 sing 409 n n 
C11 H15 SQ0 sing 410 n n 
C11 H16 SQ0 sing 411 n n 
C12 H17 SQ0 sing 412 n n 
C12 H18 SQ0 sing 413 n n 
C13 H19 SQ0 sing 414 n n 
C13 H20 SQ0 sing 415 n n 
C14 H21 SQ0 sing 416 n n 
C14 H22 SQ0 sing 417 n n 
N2 H23 SQ0 sing 418 n n 
O6 H24 SQ0 sing 419 n n 
#
_atom_sites.entry_id                     7MG8 
_atom_sites.fract_transf_matrix[1][1]    0.015056 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014302 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007945 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MN A 1 301 238 MN MN . 
F 4 CA A 1 302 239 CA CA . 
G 5 MAN A 1 303 301 MAN LNK . 
H 3 MN B 1 301 238 MN MN . 
I 4 CA B 1 302 239 CA CA . 
J 5 MAN B 1 303 301 MAN LNK . 
K 6 SQ0 C 1 101 301 SQ0 LNK . 
L 6 SQ0 D 1 101 301 SQ0 LNK . 
M 7 HOH A 1 401 20 HOH HOH . 
M 7 HOH A 2 402 12 HOH HOH . 
M 7 HOH A 3 403 24 HOH HOH . 
M 7 HOH A 4 404 1 HOH HOH . 
M 7 HOH A 5 405 17 HOH HOH . 
M 7 HOH A 6 406 9 HOH HOH . 
M 7 HOH A 7 407 3 HOH HOH . 
M 7 HOH A 8 408 2 HOH HOH . 
M 7 HOH A 9 409 16 HOH HOH . 
M 7 HOH A 10 410 15 HOH HOH . 
M 7 HOH A 11 411 22 HOH HOH . 
M 7 HOH A 12 412 5 HOH HOH . 
N 7 HOH B 1 401 13 HOH HOH . 
N 7 HOH B 2 402 4 HOH HOH . 
N 7 HOH B 3 403 14 HOH HOH . 
N 7 HOH B 4 404 18 HOH HOH . 
N 7 HOH B 5 405 10 HOH HOH . 
N 7 HOH B 6 406 11 HOH HOH . 
N 7 HOH B 7 407 7 HOH HOH . 
N 7 HOH B 8 408 6 HOH HOH . 
N 7 HOH B 9 409 19 HOH HOH . 
O 7 HOH D 1 201 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SQ0 . . . L 6 -28.392 -62.936 -23.677 1 86.16 ? C1 SQ0 101 D 1 
HETATM 2 C C2 SQ0 . . . L 6 -28.476 -63.934 -22.583 1 92.48 ? C2 SQ0 101 D 1 
HETATM 3 C C3 SQ0 . . . L 6 -27.134 -65.565 -21.496 1 96.2 ? C3 SQ0 101 D 1 
HETATM 4 C C4 SQ0 . . . L 6 -28.395 -66.189 -20.917 1 92 ? C4 SQ0 101 D 1 
HETATM 5 C C5 SQ0 . . . L 6 -28.125 -66.528 -18.529 1 113.84 ? C5 SQ0 101 D 1 
HETATM 6 O O1 SQ0 . . . L 6 -27.413 -64.872 -22.709 1 94.94 ? O1 SQ0 101 D 1 
HETATM 7 N N1 SQ0 . . . L 6 -28.633 -65.823 -19.527 1 99.92 ? N1 SQ0 101 D 1 
HETATM 8 C C6 SQ0 . . . L 6 -28.49 -66.837 -17.182 1 118.27 ? C6 SQ0 101 D 1 
HETATM 9 C C7 SQ0 . . . L 6 -27.294 -67.676 -17.024 1 114.38 ? C7 SQ0 101 D 1 
HETATM 10 C C8 SQ0 . . . L 6 -26.917 -67.357 -18.425 1 112.59 ? C8 SQ0 101 D 1 
HETATM 11 O O2 SQ0 . . . L 6 -25.995 -67.649 -19.181 1 108.02 ? O2 SQ0 101 D 1 
HETATM 12 O O3 SQ0 . . . L 6 -26.819 -68.356 -16.12 1 111.91 ? O3 SQ0 101 D 1 
HETATM 13 O O4 SQ0 . . . L 6 -35.347 -60.767 -16.054 1 174.61 ? O4 SQ0 101 D 1 
HETATM 14 C C9 SQ0 . . . L 6 -34.206 -61.322 -15.444 1 144.85 ? C9 SQ0 101 D 1 
HETATM 15 C C10 SQ0 . . . L 6 -34.006 -62.756 -15.855 1 142.51 ? C10 SQ0 101 D 1 
HETATM 16 C C11 SQ0 . . . L 6 -32.637 -63.282 -15.499 1 137.42 ? C11 SQ0 101 D 1 
HETATM 17 C C12 SQ0 . . . L 6 -31.72 -63.453 -16.698 1 131.2 ? C12 SQ0 101 D 1 
HETATM 18 C C13 SQ0 . . . L 6 -31.251 -64.881 -16.927 1 127.37 ? C13 SQ0 101 D 1 
HETATM 19 C C14 SQ0 . . . L 6 -30.011 -65.213 -16.125 1 122.69 ? C14 SQ0 101 D 1 
HETATM 20 N N2 SQ0 . . . L 6 -29.481 -66.548 -16.353 1 121.16 ? N2 SQ0 101 D 1 
HETATM 21 O O6 SQ0 . . . L 6 -27.058 -62.428 -23.698 1 76.64 ? O6 SQ0 101 D 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           21 
#