data_7MGW # _model_server_result.job_id KDSwBffCZ3EoNwMTkdkW3Q _model_server_result.datetime_utc '2024-11-16 08:23:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mgw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":708}' # _entry.id 7MGW # _exptl.entry_id 7MGW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 170.335 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECANE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MGW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MGW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 I N N ? 6 K N N ? 6 L N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 D 1 NAG A 1402 NAG 4 n D NAG 2 D 2 NAG A 1403 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 122 A CYS 200 1_555 A SG CYS 131 A CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 22 B CYS 41 1_555 B SG CYS 96 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 23 C CYS 43 1_555 C SG CYS 92 C CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A CD2 LEU 11 A LEU 89 1_555 T C1 CLR . A CLR 716 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.491 ? covale ? covale2 A ND2 ASN 130 A ASN 208 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale3 A CD1 LEU 170 A LEU 248 1_555 M C26 HP6 . A HP6 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.49 ? covale ? covale4 A CD1 ILE 173 A ILE 251 1_555 L C10 D12 . A D12 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.491 ? covale ? covale5 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? # _chem_comp.formula 'C12 H26' _chem_comp.formula_weight 170.335 _chem_comp.id D12 _chem_comp.mon_nstd_flag . _chem_comp.name DODECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7MGW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 CL A 1 701 909 CL CL . F 6 D12 A 1 702 1001 D12 D12 . G 7 LNK A 1 703 1003 LNK LNK . H 8 HP6 A 1 704 1004 HP6 HP6 . I 6 D12 A 1 705 1005 D12 D12 . J 9 D10 A 1 706 1006 D10 D10 . K 6 D12 A 1 707 1007 D12 D12 . L 6 D12 A 1 708 1008 D12 D12 . M 8 HP6 A 1 709 1009 HP6 HP6 . N 8 HP6 A 1 710 1010 HP6 HP6 . O 8 HP6 A 1 711 1011 HP6 HP6 . P 10 SRO A 1 712 1101 SRO LIG . Q 8 HP6 A 1 713 1102 HP6 HP6 . R 8 HP6 A 1 714 1103 HP6 HP6 . S 10 SRO A 1 715 1301 SRO LIG . T 11 CLR A 1 716 1401 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 D12 . . . L 6 114.507 143.139 125.426 1 181.17 ? C1 D12 708 A 1 HETATM 2 C C2 D12 . . . L 6 115.902 143.418 124.871 1 181.17 ? C2 D12 708 A 1 HETATM 3 C C3 D12 . . . L 6 116.191 142.459 123.719 1 181.17 ? C3 D12 708 A 1 HETATM 4 C C4 D12 . . . L 6 117.504 142.851 123.047 1 181.17 ? C4 D12 708 A 1 HETATM 5 C C5 D12 . . . L 6 117.74 141.953 121.834 1 181.17 ? C5 D12 708 A 1 HETATM 6 C C6 D12 . . . L 6 118.94 142.47 121.044 1 181.17 ? C6 D12 708 A 1 HETATM 7 C C7 D12 . . . L 6 119.086 141.662 119.757 1 181.17 ? C7 D12 708 A 1 HETATM 8 C C8 D12 . . . L 6 120.145 142.309 118.867 1 181.17 ? C8 D12 708 A 1 HETATM 9 C C9 D12 . . . L 6 120.201 141.577 117.528 1 181.17 ? C9 D12 708 A 1 HETATM 10 C C10 D12 . . . L 6 121.143 142.317 116.581 1 181.17 ? C10 D12 708 A 1 HETATM 11 C C11 D12 . . . L 6 121.109 141.653 115.207 1 181.17 ? C11 D12 708 A 1 HETATM 12 C C12 D12 . . . L 6 121.958 142.461 114.228 1 181.17 ? C12 D12 708 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 12 #