data_7MH5
#
_model_server_result.job_id            jXZ5yYuJ_lZFQc1Ko6E57A 
_model_server_result.datetime_utc      '2024-11-13 07:30:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mh5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":406}' 
#
_entry.id    7MH5 
#
_exptl.entry_id    7MH5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              229.402 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURYL DIMETHYLAMINE-N-OXIDE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7MH5 
_cell.length_a            141.414 
_cell.length_b            141.414 
_cell.length_c            186.502 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MH5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C LEU 210 M LEU 209 1_555 C N TYI 211 M TYI 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale2 C C TYI 211 M TYI 210 1_555 C N GLY 212 M GLY 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
metalc ? metalc1 B NE2 HIS 191 L HIS 190 1_555 O FE FE . M FE 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc2 B NE2 HIS 231 L HIS 230 1_555 O FE FE . M FE 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc3 C NE2 HIS 220 M HIS 219 1_555 O FE FE . M FE 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc4 C OE1 GLU 235 M GLU 234 1_555 O FE FE . M FE 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc5 C OE2 GLU 235 M GLU 234 1_555 O FE FE . M FE 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? 
metalc ? metalc6 C NE2 HIS 267 M HIS 266 1_555 O FE FE . M FE 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
#
_chem_comp.formula           'C14 H31 N O' 
_chem_comp.formula_weight    229.402 
_chem_comp.id                LDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURYL DIMETHYLAMINE-N-OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7MH5 
_atom_sites.fract_transf_matrix[1][1]    0.007071 
_atom_sites.fract_transf_matrix[1][2]    0.004083 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008165 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005362 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 LDA H 1 301 1251 LDA LDA . 
E 5 BPH L 1 301 1286 BPH BPH . 
F 6 U10 L 1 302 1287 U10 U10 . 
G 7 BCL L 1 303 1288 BCL BCL . 
H 7 BCL M 1 401 1282 BCL BCL . 
I 7 BCL M 1 402 1303 BCL BCL . 
J 7 BCL M 1 403 1304 BCL BCL . 
K 4 LDA M 1 404 1305 LDA LDA . 
L 4 LDA M 1 405 1306 LDA LDA . 
M 4 LDA M 1 406 1307 LDA LDA . 
N 4 LDA M 1 407 1308 LDA LDA . 
O 8 FE M 1 408 1309 FE FE . 
P 5 BPH M 1 409 1310 BPH BPH . 
Q 6 U10 M 1 410 1311 U10 U10 . 
R 9 SPO M 1 411 1312 SPO SPO . 
S 10 CDL M 1 412 1313 CDL CDL . 
T 11 HOH H 1 401 62 HOH HOH . 
T 11 HOH H 2 402 118 HOH HOH . 
T 11 HOH H 3 403 182 HOH HOH . 
T 11 HOH H 4 404 4 HOH HOH . 
T 11 HOH H 5 405 55 HOH HOH . 
T 11 HOH H 6 406 25 HOH HOH . 
T 11 HOH H 7 407 29 HOH HOH . 
T 11 HOH H 8 408 3 HOH HOH . 
T 11 HOH H 9 409 153 HOH HOH . 
T 11 HOH H 10 410 113 HOH HOH . 
T 11 HOH H 11 411 78 HOH HOH . 
T 11 HOH H 12 412 14 HOH HOH . 
T 11 HOH H 13 413 87 HOH HOH . 
T 11 HOH H 14 414 42 HOH HOH . 
T 11 HOH H 15 415 60 HOH HOH . 
T 11 HOH H 16 416 48 HOH HOH . 
T 11 HOH H 17 417 19 HOH HOH . 
T 11 HOH H 18 418 117 HOH HOH . 
T 11 HOH H 19 419 120 HOH HOH . 
T 11 HOH H 20 420 134 HOH HOH . 
T 11 HOH H 21 421 141 HOH HOH . 
T 11 HOH H 22 422 142 HOH HOH . 
T 11 HOH H 23 423 126 HOH HOH . 
T 11 HOH H 24 424 81 HOH HOH . 
T 11 HOH H 25 425 140 HOH HOH . 
T 11 HOH H 26 426 69 HOH HOH . 
T 11 HOH H 27 427 90 HOH HOH . 
T 11 HOH H 28 428 63 HOH HOH . 
T 11 HOH H 29 429 91 HOH HOH . 
T 11 HOH H 30 430 114 HOH HOH . 
T 11 HOH H 31 431 98 HOH HOH . 
T 11 HOH H 32 432 96 HOH HOH . 
T 11 HOH H 33 433 28 HOH HOH . 
T 11 HOH H 34 434 20 HOH HOH . 
T 11 HOH H 35 435 97 HOH HOH . 
T 11 HOH H 36 436 107 HOH HOH . 
T 11 HOH H 37 437 115 HOH HOH . 
T 11 HOH H 38 438 58 HOH HOH . 
T 11 HOH H 39 439 119 HOH HOH . 
T 11 HOH H 40 440 80 HOH HOH . 
T 11 HOH H 41 441 172 HOH HOH . 
T 11 HOH H 42 442 146 HOH HOH . 
T 11 HOH H 43 443 160 HOH HOH . 
T 11 HOH H 44 444 174 HOH HOH . 
T 11 HOH H 45 445 125 HOH HOH . 
T 11 HOH H 46 446 163 HOH HOH . 
T 11 HOH H 47 447 129 HOH HOH . 
T 11 HOH H 48 448 176 HOH HOH . 
T 11 HOH H 49 449 64 HOH HOH . 
T 11 HOH H 50 450 162 HOH HOH . 
T 11 HOH H 51 451 33 HOH HOH . 
T 11 HOH H 52 452 88 HOH HOH . 
T 11 HOH H 53 453 73 HOH HOH . 
T 11 HOH H 54 454 13 HOH HOH . 
T 11 HOH H 55 455 50 HOH HOH . 
T 11 HOH H 56 456 12 HOH HOH . 
T 11 HOH H 57 457 65 HOH HOH . 
T 11 HOH H 58 458 79 HOH HOH . 
T 11 HOH H 59 459 24 HOH HOH . 
T 11 HOH H 60 460 89 HOH HOH . 
T 11 HOH H 61 461 76 HOH HOH . 
T 11 HOH H 62 462 123 HOH HOH . 
T 11 HOH H 63 463 110 HOH HOH . 
T 11 HOH H 64 464 84 HOH HOH . 
T 11 HOH H 65 465 177 HOH HOH . 
T 11 HOH H 66 466 181 HOH HOH . 
T 11 HOH H 67 467 2 HOH HOH . 
T 11 HOH H 68 468 82 HOH HOH . 
T 11 HOH H 69 469 170 HOH HOH . 
T 11 HOH H 70 470 173 HOH HOH . 
T 11 HOH H 71 471 131 HOH HOH . 
T 11 HOH H 72 472 167 HOH HOH . 
T 11 HOH H 73 473 116 HOH HOH . 
T 11 HOH H 74 474 127 HOH HOH . 
T 11 HOH H 75 475 139 HOH HOH . 
T 11 HOH H 76 476 165 HOH HOH . 
T 11 HOH H 77 477 124 HOH HOH . 
T 11 HOH H 78 478 143 HOH HOH . 
T 11 HOH H 79 479 77 HOH HOH . 
T 11 HOH H 80 480 175 HOH HOH . 
T 11 HOH H 81 481 161 HOH HOH . 
T 11 HOH H 82 482 168 HOH HOH . 
U 11 HOH L 1 401 40 HOH HOH . 
U 11 HOH L 2 402 9 HOH HOH . 
U 11 HOH L 3 403 111 HOH HOH . 
U 11 HOH L 4 404 17 HOH HOH . 
U 11 HOH L 5 405 109 HOH HOH . 
U 11 HOH L 6 406 105 HOH HOH . 
U 11 HOH L 7 407 32 HOH HOH . 
U 11 HOH L 8 408 26 HOH HOH . 
U 11 HOH L 9 409 183 HOH HOH . 
U 11 HOH L 10 410 132 HOH HOH . 
U 11 HOH L 11 411 169 HOH HOH . 
U 11 HOH L 12 412 23 HOH HOH . 
U 11 HOH L 13 413 157 HOH HOH . 
U 11 HOH L 14 414 1 HOH HOH . 
U 11 HOH L 15 415 30 HOH HOH . 
U 11 HOH L 16 416 106 HOH HOH . 
U 11 HOH L 17 417 128 HOH HOH . 
U 11 HOH L 18 418 144 HOH HOH . 
U 11 HOH L 19 419 22 HOH HOH . 
U 11 HOH L 20 420 16 HOH HOH . 
U 11 HOH L 21 421 83 HOH HOH . 
U 11 HOH L 22 422 5 HOH HOH . 
U 11 HOH L 23 423 15 HOH HOH . 
U 11 HOH L 24 424 31 HOH HOH . 
U 11 HOH L 25 425 47 HOH HOH . 
U 11 HOH L 26 426 18 HOH HOH . 
U 11 HOH L 27 427 184 HOH HOH . 
U 11 HOH L 28 428 61 HOH HOH . 
U 11 HOH L 29 429 21 HOH HOH . 
U 11 HOH L 30 430 45 HOH HOH . 
U 11 HOH L 31 431 70 HOH HOH . 
U 11 HOH L 32 432 59 HOH HOH . 
U 11 HOH L 33 433 122 HOH HOH . 
U 11 HOH L 34 434 148 HOH HOH . 
U 11 HOH L 35 435 133 HOH HOH . 
U 11 HOH L 36 436 138 HOH HOH . 
U 11 HOH L 37 437 94 HOH HOH . 
U 11 HOH L 38 438 152 HOH HOH . 
U 11 HOH L 39 439 102 HOH HOH . 
U 11 HOH L 40 440 178 HOH HOH . 
U 11 HOH L 41 441 112 HOH HOH . 
U 11 HOH L 42 442 159 HOH HOH . 
U 11 HOH L 43 443 145 HOH HOH . 
U 11 HOH L 44 444 151 HOH HOH . 
U 11 HOH L 45 445 166 HOH HOH . 
V 11 HOH M 1 501 71 HOH HOH . 
V 11 HOH M 2 502 85 HOH HOH . 
V 11 HOH M 3 503 27 HOH HOH . 
V 11 HOH M 4 504 37 HOH HOH . 
V 11 HOH M 5 505 36 HOH HOH . 
V 11 HOH M 6 506 39 HOH HOH . 
V 11 HOH M 7 507 180 HOH HOH . 
V 11 HOH M 8 508 150 HOH HOH . 
V 11 HOH M 9 509 10 HOH HOH . 
V 11 HOH M 10 510 149 HOH HOH . 
V 11 HOH M 11 511 53 HOH HOH . 
V 11 HOH M 12 512 156 HOH HOH . 
V 11 HOH M 13 513 86 HOH HOH . 
V 11 HOH M 14 514 147 HOH HOH . 
V 11 HOH M 15 515 179 HOH HOH . 
V 11 HOH M 16 516 56 HOH HOH . 
V 11 HOH M 17 517 8 HOH HOH . 
V 11 HOH M 18 518 54 HOH HOH . 
V 11 HOH M 19 519 66 HOH HOH . 
V 11 HOH M 20 520 51 HOH HOH . 
V 11 HOH M 21 521 35 HOH HOH . 
V 11 HOH M 22 522 41 HOH HOH . 
V 11 HOH M 23 523 100 HOH HOH . 
V 11 HOH M 24 524 95 HOH HOH . 
V 11 HOH M 25 525 93 HOH HOH . 
V 11 HOH M 26 526 6 HOH HOH . 
V 11 HOH M 27 527 130 HOH HOH . 
V 11 HOH M 28 528 101 HOH HOH . 
V 11 HOH M 29 529 34 HOH HOH . 
V 11 HOH M 30 530 75 HOH HOH . 
V 11 HOH M 31 531 99 HOH HOH . 
V 11 HOH M 32 532 11 HOH HOH . 
V 11 HOH M 33 533 57 HOH HOH . 
V 11 HOH M 34 534 154 HOH HOH . 
V 11 HOH M 35 535 49 HOH HOH . 
V 11 HOH M 36 536 38 HOH HOH . 
V 11 HOH M 37 537 108 HOH HOH . 
V 11 HOH M 38 538 7 HOH HOH . 
V 11 HOH M 39 539 164 HOH HOH . 
V 11 HOH M 40 540 67 HOH HOH . 
V 11 HOH M 41 541 171 HOH HOH . 
V 11 HOH M 42 542 104 HOH HOH . 
V 11 HOH M 43 543 155 HOH HOH . 
V 11 HOH M 44 544 121 HOH HOH . 
V 11 HOH M 45 545 92 HOH HOH . 
V 11 HOH M 46 546 158 HOH HOH . 
V 11 HOH M 47 547 72 HOH HOH . 
V 11 HOH M 48 548 68 HOH HOH . 
V 11 HOH M 49 549 137 HOH HOH . 
V 11 HOH M 50 550 103 HOH HOH . 
V 11 HOH M 51 551 135 HOH HOH . 
V 11 HOH M 52 552 74 HOH HOH . 
V 11 HOH M 53 553 43 HOH HOH . 
V 11 HOH M 54 554 46 HOH HOH . 
V 11 HOH M 55 555 52 HOH HOH . 
V 11 HOH M 56 556 44 HOH HOH . 
V 11 HOH M 57 557 136 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LDA . . . M 4 61.727 -32.998 -24.247 1 125.23 ? N1 LDA 406 M 1 
HETATM 2 O O1 LDA . . . M 4 62.898 -32.217 -24.284 1 126.01 ? O1 LDA 406 M 1 
HETATM 3 C CM1 LDA . . . M 4 61.045 -32.883 -25.572 1 125.93 ? CM1 LDA 406 M 1 
HETATM 4 C CM2 LDA . . . M 4 62.117 -34.417 -23.999 1 124.72 ? CM2 LDA 406 M 1 
HETATM 5 C C1 LDA . . . M 4 60.825 -32.48 -23.153 1 115.33 ? C1 LDA 406 M 1 
HETATM 6 C C2 LDA . . . M 4 61.412 -32.488 -21.752 1 102.75 ? C2 LDA 406 M 1 
HETATM 7 C C3 LDA . . . M 4 60.485 -31.835 -20.737 1 98.56 ? C3 LDA 406 M 1 
HETATM 8 C C4 LDA . . . M 4 60.145 -32.678 -19.524 1 99.04 ? C4 LDA 406 M 1 
HETATM 9 C C5 LDA . . . M 4 58.789 -32.377 -18.915 1 102.94 ? C5 LDA 406 M 1 
HETATM 10 C C6 LDA . . . M 4 58.523 -33.066 -17.592 1 105.91 ? C6 LDA 406 M 1 
HETATM 11 C C7 LDA . . . M 4 57.06 -33.134 -17.208 1 109.25 ? C7 LDA 406 M 1 
HETATM 12 C C8 LDA . . . M 4 56.801 -33.745 -15.846 1 115.47 ? C8 LDA 406 M 1 
HETATM 13 C C9 LDA . . . M 4 55.373 -33.617 -15.352 1 116.28 ? C9 LDA 406 M 1 
HETATM 14 C C10 LDA . . . M 4 55.098 -34.331 -14.042 1 114.24 ? C10 LDA 406 M 1 
HETATM 15 C C11 LDA . . . M 4 53.804 -33.955 -13.359 1 114.42 ? C11 LDA 406 M 1 
HETATM 16 C C12 LDA . . . M 4 52.709 -34.988 -13.501 1 115.41 ? C12 LDA 406 M 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           16 
#