data_7MH7
#
_model_server_result.job_id            Kr6pnZED840yabbxF4DOGQ 
_model_server_result.datetime_utc      '2024-11-10 01:22:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mh7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    7MH7 
#
_exptl.entry_id    7MH7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7MH7 
_cell.length_a            99.165 
_cell.length_b            99.165 
_cell.length_c            121.867 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MH7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 99.165 0 0 
3 'crystal symmetry operation' 8_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 121.867 
4 'crystal symmetry operation' 11_656 -x+y+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 99.165 0 121.867 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 237 n n 
PA O2A NAP sing 238 n n 
PA O5B NAP sing 239 n n 
PA O3 NAP sing 240 n n 
O2A HOA2 NAP sing 241 n n 
O5B C5B NAP sing 242 n n 
C5B C4B NAP sing 243 n n 
C5B H51A NAP sing 244 n n 
C5B H52A NAP sing 245 n n 
C4B O4B NAP sing 246 n n 
C4B C3B NAP sing 247 n n 
C4B H4B NAP sing 248 n n 
O4B C1B NAP sing 249 n n 
C3B O3B NAP sing 250 n n 
C3B C2B NAP sing 251 n n 
C3B H3B NAP sing 252 n n 
O3B HO3A NAP sing 253 n n 
C2B O2B NAP sing 254 n n 
C2B C1B NAP sing 255 n n 
C2B H2B NAP sing 256 n n 
O2B P2B NAP sing 257 n n 
C1B N9A NAP sing 258 n n 
C1B H1B NAP sing 259 n n 
N9A C8A NAP sing 260 n y 
N9A C4A NAP sing 261 n y 
C8A N7A NAP doub 262 n y 
C8A H8A NAP sing 263 n n 
N7A C5A NAP sing 264 n y 
C5A C6A NAP sing 265 n y 
C5A C4A NAP doub 266 n y 
C6A N6A NAP sing 267 n n 
C6A N1A NAP doub 268 n y 
N6A H61A NAP sing 269 n n 
N6A H62A NAP sing 270 n n 
N1A C2A NAP sing 271 n y 
C2A N3A NAP doub 272 n y 
C2A H2A NAP sing 273 n n 
N3A C4A NAP sing 274 n y 
O3 PN NAP sing 275 n n 
PN O1N NAP doub 276 n n 
PN O2N NAP sing 277 n n 
PN O5D NAP sing 278 n n 
O5D C5D NAP sing 279 n n 
C5D C4D NAP sing 280 n n 
C5D H51N NAP sing 281 n n 
C5D H52N NAP sing 282 n n 
C4D O4D NAP sing 283 n n 
C4D C3D NAP sing 284 n n 
C4D H4D NAP sing 285 n n 
O4D C1D NAP sing 286 n n 
C3D O3D NAP sing 287 n n 
C3D C2D NAP sing 288 n n 
C3D H3D NAP sing 289 n n 
O3D HO3N NAP sing 290 n n 
C2D O2D NAP sing 291 n n 
C2D C1D NAP sing 292 n n 
C2D H2D NAP sing 293 n n 
O2D HO2N NAP sing 294 n n 
C1D N1N NAP sing 295 n n 
C1D H1D NAP sing 296 n n 
N1N C2N NAP sing 297 n y 
N1N C6N NAP doub 298 n y 
C2N C3N NAP doub 299 n y 
C2N H2N NAP sing 300 n n 
C3N C7N NAP sing 301 n n 
C3N C4N NAP sing 302 n y 
C7N O7N NAP doub 303 n n 
C7N N7N NAP sing 304 n n 
N7N H71N NAP sing 305 n n 
N7N H72N NAP sing 306 n n 
C4N C5N NAP doub 307 n y 
C4N H4N NAP sing 308 n n 
C5N C6N NAP sing 309 n y 
C5N H5N NAP sing 310 n n 
C6N H6N NAP sing 311 n n 
P2B O1X NAP doub 312 n n 
P2B O2X NAP sing 313 n n 
P2B O3X NAP sing 314 n n 
O2X HOP2 NAP sing 315 n n 
O3X HOP3 NAP sing 316 n n 
#
_atom_sites.entry_id                     7MH7 
_atom_sites.fract_transf_matrix[1][1]    0.010084 
_atom_sites.fract_transf_matrix[1][2]    0.005822 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011644 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008206 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 301 301 NAP NAP . 
C 3 HOH A 1 401 38 HOH HOH . 
C 3 HOH A 2 402 11 HOH HOH . 
C 3 HOH A 3 403 39 HOH HOH . 
C 3 HOH A 4 404 16 HOH HOH . 
C 3 HOH A 5 405 37 HOH HOH . 
C 3 HOH A 6 406 4 HOH HOH . 
C 3 HOH A 7 407 5 HOH HOH . 
C 3 HOH A 8 408 3 HOH HOH . 
C 3 HOH A 9 409 21 HOH HOH . 
C 3 HOH A 10 410 14 HOH HOH . 
C 3 HOH A 11 411 36 HOH HOH . 
C 3 HOH A 12 412 17 HOH HOH . 
C 3 HOH A 13 413 29 HOH HOH . 
C 3 HOH A 14 414 28 HOH HOH . 
C 3 HOH A 15 415 8 HOH HOH . 
C 3 HOH A 16 416 18 HOH HOH . 
C 3 HOH A 17 417 10 HOH HOH . 
C 3 HOH A 18 418 7 HOH HOH . 
C 3 HOH A 19 419 2 HOH HOH . 
C 3 HOH A 20 420 40 HOH HOH . 
C 3 HOH A 21 421 22 HOH HOH . 
C 3 HOH A 22 422 15 HOH HOH . 
C 3 HOH A 23 423 24 HOH HOH . 
C 3 HOH A 24 424 31 HOH HOH . 
C 3 HOH A 25 425 12 HOH HOH . 
C 3 HOH A 26 426 30 HOH HOH . 
C 3 HOH A 27 427 25 HOH HOH . 
C 3 HOH A 28 428 20 HOH HOH . 
C 3 HOH A 29 429 1 HOH HOH . 
C 3 HOH A 30 430 9 HOH HOH . 
C 3 HOH A 31 431 26 HOH HOH . 
C 3 HOH A 32 432 27 HOH HOH . 
C 3 HOH A 33 433 33 HOH HOH . 
C 3 HOH A 34 434 19 HOH HOH . 
C 3 HOH A 35 435 32 HOH HOH . 
C 3 HOH A 36 436 6 HOH HOH . 
C 3 HOH A 37 437 23 HOH HOH . 
C 3 HOH A 38 438 35 HOH HOH . 
C 3 HOH A 39 439 34 HOH HOH . 
C 3 HOH A 40 440 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . B 2 31.723 6.076 72.317 1 76.75 ? PA NAP 301 A 1 
HETATM 2 O O1A NAP . . . B 2 31.45 6.239 70.858 1 55.71 ? O1A NAP 301 A 1 
HETATM 3 O O2A NAP . . . B 2 31.392 4.76 72.939 1 51 ? O2A NAP 301 A 1 
HETATM 4 O O5B NAP . . . B 2 33.257 6.43 72.626 1 46.17 ? O5B NAP 301 A 1 
HETATM 5 C C5B NAP . . . B 2 33.608 6.627 74.019 1 41.15 ? C5B NAP 301 A 1 
HETATM 6 C C4B NAP . . . B 2 35.107 6.584 74.189 1 36.24 ? C4B NAP 301 A 1 
HETATM 7 O O4B NAP . . . B 2 35.711 7.638 73.391 1 32.05 ? O4B NAP 301 A 1 
HETATM 8 C C3B NAP . . . B 2 35.629 6.804 75.619 1 36.53 ? C3B NAP 301 A 1 
HETATM 9 O O3B NAP . . . B 2 36.736 5.948 75.869 1 38.05 ? O3B NAP 301 A 1 
HETATM 10 C C2B NAP . . . B 2 36.09 8.255 75.564 1 36.44 ? C2B NAP 301 A 1 
HETATM 11 O O2B NAP . . . B 2 37.004 8.635 76.594 1 45.36 ? O2B NAP 301 A 1 
HETATM 12 C C1B NAP . . . B 2 36.702 8.261 74.171 1 29.49 ? C1B NAP 301 A 1 
HETATM 13 N N9A NAP . . . B 2 36.956 9.595 73.638 1 28.83 ? N9A NAP 301 A 1 
HETATM 14 C C8A NAP . . . B 2 36.019 10.506 73.222 1 25.3 ? C8A NAP 301 A 1 
HETATM 15 N N7A NAP . . . B 2 36.542 11.625 72.785 1 21.23 ? N7A NAP 301 A 1 
HETATM 16 C C5A NAP . . . B 2 37.911 11.438 72.91 1 24.95 ? C5A NAP 301 A 1 
HETATM 17 C C6A NAP . . . B 2 39.011 12.264 72.609 1 20.88 ? C6A NAP 301 A 1 
HETATM 18 N N6A NAP . . . B 2 38.899 13.488 72.1 1 9.82 ? N6A NAP 301 A 1 
HETATM 19 N N1A NAP . . . B 2 40.248 11.77 72.854 1 14.19 ? N1A NAP 301 A 1 
HETATM 20 C C2A NAP . . . B 2 40.354 10.538 73.366 1 16.29 ? C2A NAP 301 A 1 
HETATM 21 N N3A NAP . . . B 2 39.394 9.675 73.688 1 20.99 ? N3A NAP 301 A 1 
HETATM 22 C C4A NAP . . . B 2 38.179 10.189 73.434 1 25.9 ? C4A NAP 301 A 1 
HETATM 23 O O3 NAP . . . B 2 30.973 7.231 73.139 1 62.55 ? O3 NAP 301 A 1 
HETATM 24 P PN NAP . . . B 2 30.855 8.82 72.959 1 51.44 ? PN NAP 301 A 1 
HETATM 25 O O1N NAP . . . B 2 29.686 9.121 72.079 1 43.56 ? O1N NAP 301 A 1 
HETATM 26 O O2N NAP . . . B 2 30.929 9.463 74.304 1 58.6 ? O2N NAP 301 A 1 
HETATM 27 O O5D NAP . . . B 2 32.204 9.122 72.15 1 50.72 ? O5D NAP 301 A 1 
HETATM 28 C C5D NAP . . . B 2 32.092 9.7 70.827 1 32.44 ? C5D NAP 301 A 1 
HETATM 29 C C4D NAP . . . B 2 33.405 9.534 70.104 1 29.23 ? C4D NAP 301 A 1 
HETATM 30 O O4D NAP . . . B 2 33.788 8.148 70.131 1 33.18 ? O4D NAP 301 A 1 
HETATM 31 C C3D NAP . . . B 2 33.409 9.867 68.608 1 28.18 ? C3D NAP 301 A 1 
HETATM 32 O O3D NAP . . . B 2 33.504 11.261 68.34 1 24.8 ? O3D NAP 301 A 1 
HETATM 33 C C2D NAP . . . B 2 34.595 9.033 68.104 1 24.73 ? C2D NAP 301 A 1 
HETATM 34 O O2D NAP . . . B 2 35.771 9.811 67.952 1 20.16 ? O2D NAP 301 A 1 
HETATM 35 C C1D NAP . . . B 2 34.815 7.954 69.169 1 26.23 ? C1D NAP 301 A 1 
HETATM 36 N N1N NAP . . . B 2 34.663 6.581 68.607 1 24.19 ? N1N NAP 301 A 1 
HETATM 37 C C2N NAP . . . B 2 35.735 5.726 68.573 1 23.67 ? C2N NAP 301 A 1 
HETATM 38 C C3N NAP . . . B 2 35.595 4.448 68.048 1 23.01 ? C3N NAP 301 A 1 
HETATM 39 C C7N NAP . . . B 2 36.788 3.526 68.069 1 20.65 ? C7N NAP 301 A 1 
HETATM 40 O O7N NAP . . . B 2 37.848 3.924 68.545 1 19.55 ? O7N NAP 301 A 1 
HETATM 41 N N7N NAP . . . B 2 36.633 2.308 67.57 1 22.99 ? N7N NAP 301 A 1 
HETATM 42 C C4N NAP . . . B 2 34.368 4.061 67.521 1 23.92 ? C4N NAP 301 A 1 
HETATM 43 C C5N NAP . . . B 2 33.299 4.927 67.571 1 19.88 ? C5N NAP 301 A 1 
HETATM 44 C C6N NAP . . . B 2 33.465 6.176 68.123 1 25.73 ? C6N NAP 301 A 1 
HETATM 45 P P2B NAP . . . B 2 36.275 8.682 78.04 1 52.06 ? P2B NAP 301 A 1 
HETATM 46 O O1X NAP . . . B 2 36.192 7.268 78.587 1 46.59 ? O1X NAP 301 A 1 
HETATM 47 O O2X NAP . . . B 2 37.121 9.582 78.921 1 55.33 ? O2X NAP 301 A 1 
HETATM 48 O O3X NAP . . . B 2 34.9 9.271 77.784 1 33.86 ? O3X NAP 301 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           48 
#