data_7MH8
#
_model_server_result.job_id            jWKUV7yWW1aHsQiAsydeag 
_model_server_result.datetime_utc      '2024-11-24 16:27:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mh8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":403}' 
#
_entry.id    7MH8 
#
_exptl.entry_id    7MH8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              229.402 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURYL DIMETHYLAMINE-N-OXIDE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7MH8 
_cell.length_a            140.96 
_cell.length_b            140.96 
_cell.length_c            187.01 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MH8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C LEU 210 M LEU 209 1_555 C N ZDJ 211 M ZDJ 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale2 C C ZDJ 211 M ZDJ 210 1_555 C N GLY 212 M GLY 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
metalc ? metalc1 B NE2 HIS 191 L HIS 190 1_555 O FE FE . M FE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc2 B NE2 HIS 231 L HIS 230 1_555 O FE FE . M FE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc3 C NE2 HIS 220 M HIS 219 1_555 O FE FE . M FE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc4 C OE1 GLU 235 M GLU 234 1_555 O FE FE . M FE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc5 C OE2 GLU 235 M GLU 234 1_555 O FE FE . M FE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc6 C NE2 HIS 267 M HIS 266 1_555 O FE FE . M FE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
#
_chem_comp.formula           'C14 H31 N O' 
_chem_comp.formula_weight    229.402 
_chem_comp.id                LDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURYL DIMETHYLAMINE-N-OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 O1 LDA sing 722 n n 
N1 CM1 LDA sing 723 n n 
N1 CM2 LDA sing 724 n n 
N1 C1 LDA sing 725 n n 
CM1 HM11 LDA sing 726 n n 
CM1 HM12 LDA sing 727 n n 
CM1 HM13 LDA sing 728 n n 
CM2 HM21 LDA sing 729 n n 
CM2 HM22 LDA sing 730 n n 
CM2 HM23 LDA sing 731 n n 
C1 C2 LDA sing 732 n n 
C1 H11 LDA sing 733 n n 
C1 H12 LDA sing 734 n n 
C2 C3 LDA sing 735 n n 
C2 H21 LDA sing 736 n n 
C2 H22 LDA sing 737 n n 
C3 C4 LDA sing 738 n n 
C3 H31 LDA sing 739 n n 
C3 H32 LDA sing 740 n n 
C4 C5 LDA sing 741 n n 
C4 H41 LDA sing 742 n n 
C4 H42 LDA sing 743 n n 
C5 C6 LDA sing 744 n n 
C5 H51 LDA sing 745 n n 
C5 H52 LDA sing 746 n n 
C6 C7 LDA sing 747 n n 
C6 H61 LDA sing 748 n n 
C6 H62 LDA sing 749 n n 
C7 C8 LDA sing 750 n n 
C7 H71 LDA sing 751 n n 
C7 H72 LDA sing 752 n n 
C8 C9 LDA sing 753 n n 
C8 H81 LDA sing 754 n n 
C8 H82 LDA sing 755 n n 
C9 C10 LDA sing 756 n n 
C9 H91 LDA sing 757 n n 
C9 H92 LDA sing 758 n n 
C10 C11 LDA sing 759 n n 
C10 H101 LDA sing 760 n n 
C10 H102 LDA sing 761 n n 
C11 C12 LDA sing 762 n n 
C11 H111 LDA sing 763 n n 
C11 H112 LDA sing 764 n n 
C12 H121 LDA sing 765 n n 
C12 H122 LDA sing 766 n n 
C12 H123 LDA sing 767 n n 
#
_atom_sites.entry_id                     7MH8 
_atom_sites.fract_transf_matrix[1][1]    0.007094 
_atom_sites.fract_transf_matrix[1][2]    0.004096 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008192 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005347 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 LDA H 1 301 1251 LDA LDA . 
E 5 BCL L 1 301 1282 BCL BCL . 
F 6 BPH L 1 302 1286 BPH BPH . 
G 7 U10 L 1 303 1287 U10 U10 . 
H 5 BCL L 1 304 1288 BCL BCL . 
I 5 BCL L 1 305 1303 BCL BCL . 
J 5 BCL M 1 401 1304 BCL BCL . 
K 4 LDA M 1 402 1305 LDA LDA . 
L 4 LDA M 1 403 1306 LDA LDA . 
M 4 LDA M 1 404 1307 LDA LDA . 
N 4 LDA M 1 405 1308 LDA LDA . 
O 8 FE M 1 406 1309 FE FE . 
P 6 BPH M 1 407 1310 BPH BPH . 
Q 7 U10 M 1 408 1311 U10 U10 . 
R 9 SPO M 1 409 1312 SPO SPO . 
S 10 CDL M 1 410 1313 CDL CDL . 
T 11 HOH H 1 401 118 HOH HOH . 
T 11 HOH H 2 402 100 HOH HOH . 
T 11 HOH H 3 403 76 HOH HOH . 
T 11 HOH H 4 404 4 HOH HOH . 
T 11 HOH H 5 405 48 HOH HOH . 
T 11 HOH H 6 406 71 HOH HOH . 
T 11 HOH H 7 407 37 HOH HOH . 
T 11 HOH H 8 408 36 HOH HOH . 
T 11 HOH H 9 409 68 HOH HOH . 
T 11 HOH H 10 410 123 HOH HOH . 
T 11 HOH H 11 411 20 HOH HOH . 
T 11 HOH H 12 412 72 HOH HOH . 
T 11 HOH H 13 413 112 HOH HOH . 
T 11 HOH H 14 414 125 HOH HOH . 
T 11 HOH H 15 415 75 HOH HOH . 
T 11 HOH H 16 416 38 HOH HOH . 
T 11 HOH H 17 417 127 HOH HOH . 
T 11 HOH H 18 418 53 HOH HOH . 
T 11 HOH H 19 419 39 HOH HOH . 
T 11 HOH H 20 420 104 HOH HOH . 
T 11 HOH H 21 421 80 HOH HOH . 
T 11 HOH H 22 422 74 HOH HOH . 
T 11 HOH H 23 423 129 HOH HOH . 
T 11 HOH H 24 424 2 HOH HOH . 
T 11 HOH H 25 425 17 HOH HOH . 
T 11 HOH H 26 426 117 HOH HOH . 
T 11 HOH H 27 427 70 HOH HOH . 
T 11 HOH H 28 428 25 HOH HOH . 
T 11 HOH H 29 429 122 HOH HOH . 
T 11 HOH H 30 430 91 HOH HOH . 
T 11 HOH H 31 431 31 HOH HOH . 
T 11 HOH H 32 432 41 HOH HOH . 
T 11 HOH H 33 433 93 HOH HOH . 
T 11 HOH H 34 434 28 HOH HOH . 
T 11 HOH H 35 435 113 HOH HOH . 
T 11 HOH H 36 436 115 HOH HOH . 
T 11 HOH H 37 437 94 HOH HOH . 
T 11 HOH H 38 438 58 HOH HOH . 
T 11 HOH H 39 439 16 HOH HOH . 
T 11 HOH H 40 440 78 HOH HOH . 
T 11 HOH H 41 441 73 HOH HOH . 
T 11 HOH H 42 442 86 HOH HOH . 
T 11 HOH H 43 443 54 HOH HOH . 
T 11 HOH H 44 444 67 HOH HOH . 
T 11 HOH H 45 445 62 HOH HOH . 
T 11 HOH H 46 446 105 HOH HOH . 
T 11 HOH H 47 447 132 HOH HOH . 
T 11 HOH H 48 448 46 HOH HOH . 
T 11 HOH H 49 449 82 HOH HOH . 
T 11 HOH H 50 450 119 HOH HOH . 
T 11 HOH H 51 451 107 HOH HOH . 
T 11 HOH H 52 452 106 HOH HOH . 
T 11 HOH H 53 453 111 HOH HOH . 
T 11 HOH H 54 454 116 HOH HOH . 
T 11 HOH H 55 455 97 HOH HOH . 
T 11 HOH H 56 456 5 HOH HOH . 
T 11 HOH H 57 457 45 HOH HOH . 
T 11 HOH H 58 458 81 HOH HOH . 
U 11 HOH L 1 401 29 HOH HOH . 
U 11 HOH L 2 402 14 HOH HOH . 
U 11 HOH L 3 403 7 HOH HOH . 
U 11 HOH L 4 404 84 HOH HOH . 
U 11 HOH L 5 405 50 HOH HOH . 
U 11 HOH L 6 406 10 HOH HOH . 
U 11 HOH L 7 407 21 HOH HOH . 
U 11 HOH L 8 408 13 HOH HOH . 
U 11 HOH L 9 409 96 HOH HOH . 
U 11 HOH L 10 410 126 HOH HOH . 
U 11 HOH L 11 411 35 HOH HOH . 
U 11 HOH L 12 412 22 HOH HOH . 
U 11 HOH L 13 413 83 HOH HOH . 
U 11 HOH L 14 414 52 HOH HOH . 
U 11 HOH L 15 415 30 HOH HOH . 
U 11 HOH L 16 416 88 HOH HOH . 
U 11 HOH L 17 417 3 HOH HOH . 
U 11 HOH L 18 418 12 HOH HOH . 
U 11 HOH L 19 419 15 HOH HOH . 
U 11 HOH L 20 420 19 HOH HOH . 
U 11 HOH L 21 421 110 HOH HOH . 
U 11 HOH L 22 422 102 HOH HOH . 
U 11 HOH L 23 423 121 HOH HOH . 
U 11 HOH L 24 424 130 HOH HOH . 
U 11 HOH L 25 425 128 HOH HOH . 
U 11 HOH L 26 426 103 HOH HOH . 
U 11 HOH L 27 427 34 HOH HOH . 
U 11 HOH L 28 428 114 HOH HOH . 
U 11 HOH L 29 429 89 HOH HOH . 
U 11 HOH L 30 430 9 HOH HOH . 
U 11 HOH L 31 431 109 HOH HOH . 
V 11 HOH M 1 501 85 HOH HOH . 
V 11 HOH M 2 502 55 HOH HOH . 
V 11 HOH M 3 503 26 HOH HOH . 
V 11 HOH M 4 504 77 HOH HOH . 
V 11 HOH M 5 505 99 HOH HOH . 
V 11 HOH M 6 506 43 HOH HOH . 
V 11 HOH M 7 507 8 HOH HOH . 
V 11 HOH M 8 508 33 HOH HOH . 
V 11 HOH M 9 509 56 HOH HOH . 
V 11 HOH M 10 510 120 HOH HOH . 
V 11 HOH M 11 511 40 HOH HOH . 
V 11 HOH M 12 512 101 HOH HOH . 
V 11 HOH M 13 513 47 HOH HOH . 
V 11 HOH M 14 514 87 HOH HOH . 
V 11 HOH M 15 515 32 HOH HOH . 
V 11 HOH M 16 516 6 HOH HOH . 
V 11 HOH M 17 517 24 HOH HOH . 
V 11 HOH M 18 518 60 HOH HOH . 
V 11 HOH M 19 519 23 HOH HOH . 
V 11 HOH M 20 520 95 HOH HOH . 
V 11 HOH M 21 521 1 HOH HOH . 
V 11 HOH M 22 522 42 HOH HOH . 
V 11 HOH M 23 523 11 HOH HOH . 
V 11 HOH M 24 524 18 HOH HOH . 
V 11 HOH M 25 525 131 HOH HOH . 
V 11 HOH M 26 526 69 HOH HOH . 
V 11 HOH M 27 527 92 HOH HOH . 
V 11 HOH M 28 528 66 HOH HOH . 
V 11 HOH M 29 529 49 HOH HOH . 
V 11 HOH M 30 530 90 HOH HOH . 
V 11 HOH M 31 531 98 HOH HOH . 
V 11 HOH M 32 532 124 HOH HOH . 
V 11 HOH M 33 533 79 HOH HOH . 
V 11 HOH M 34 534 59 HOH HOH . 
V 11 HOH M 35 535 51 HOH HOH . 
V 11 HOH M 36 536 61 HOH HOH . 
V 11 HOH M 37 537 63 HOH HOH . 
V 11 HOH M 38 538 27 HOH HOH . 
V 11 HOH M 39 539 108 HOH HOH . 
V 11 HOH M 40 540 44 HOH HOH . 
V 11 HOH M 41 541 57 HOH HOH . 
V 11 HOH M 42 542 64 HOH HOH . 
V 11 HOH M 43 543 65 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LDA . . . L 4 -30.065 -72.619 -39.85 1 121.51 ? N1 LDA 403 M 1 
HETATM 2 O O1 LDA . . . L 4 -31.27 -72.675 -39.12 1 121.09 ? O1 LDA 403 M 1 
HETATM 3 C CM1 LDA . . . L 4 -28.933 -72.732 -38.884 1 123.41 ? CM1 LDA 403 M 1 
HETATM 4 C CM2 LDA . . . L 4 -30.048 -73.769 -40.803 1 121.23 ? CM2 LDA 403 M 1 
HETATM 5 C C1 LDA . . . L 4 -30.023 -71.303 -40.582 1 114.39 ? C1 LDA 403 M 1 
HETATM 6 C C2 LDA . . . L 4 -28.747 -71.039 -41.362 1 108.12 ? C2 LDA 403 M 1 
HETATM 7 C C3 LDA . . . L 4 -27.902 -69.909 -40.79 1 103.34 ? C3 LDA 403 M 1 
HETATM 8 C C4 LDA . . . L 4 -27.87 -68.654 -41.637 1 98.59 ? C4 LDA 403 M 1 
HETATM 9 C C5 LDA . . . L 4 -26.632 -67.808 -41.446 1 94.86 ? C5 LDA 403 M 1 
HETATM 10 C C6 LDA . . . L 4 -26.793 -66.36 -41.851 1 92.08 ? C6 LDA 403 M 1 
HETATM 11 C C7 LDA . . . L 4 -25.634 -65.478 -41.449 1 90.63 ? C7 LDA 403 M 1 
HETATM 12 C C8 LDA . . . L 4 -25.933 -63.998 -41.459 1 92.45 ? C8 LDA 403 M 1 
HETATM 13 C C9 LDA . . . L 4 -25.263 -63.224 -40.347 1 96.57 ? C9 LDA 403 M 1 
HETATM 14 C C10 LDA . . . L 4 -25.012 -61.765 -40.662 1 99.53 ? C10 LDA 403 M 1 
HETATM 15 C C11 LDA . . . L 4 -24.311 -60.992 -39.569 1 99.45 ? C11 LDA 403 M 1 
HETATM 16 C C12 LDA . . . L 4 -22.895 -61.452 -39.299 1 97.76 ? C12 LDA 403 M 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           232 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#