data_7MHK
#
_model_server_result.job_id            amI6DWhWgTyY6jKJB48Oeg 
_model_server_result.datetime_utc      '2025-07-08 00:08:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mhk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    7MHK 
#
_exptl.entry_id    7MHK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.12 
_cell.angle_gamma         90 
_cell.entry_id            7MHK 
_cell.length_a            114.3 
_cell.length_b            54.29 
_cell.length_c            44.97 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MHK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 41 A HIS 41 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc2 A SG CYS 145 A CYS 145 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc3 D ZN ZN . A ZN 503 1_555 E O HOH . A HOH 665 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? 
metalc ? metalc4 D ZN ZN . A ZN 503 1_555 E O HOH . A HOH 672 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7MHK 
_atom_sites.fract_transf_matrix[1][1]    0.008749 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001879 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01842 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022744 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 501 501 DMS DMS . 
C 2 DMS A 1 502 601 DMS DMS . 
D 3 ZN A 1 503 1 ZN ZN . 
E 4 HOH A 1 601 22 HOH HOH . 
E 4 HOH A 2 602 14 HOH HOH . 
E 4 HOH A 3 603 16 HOH HOH . 
E 4 HOH A 4 604 15 HOH HOH . 
E 4 HOH A 5 605 33 HOH HOH . 
E 4 HOH A 6 606 68 HOH HOH . 
E 4 HOH A 7 607 46 HOH HOH . 
E 4 HOH A 8 608 57 HOH HOH . 
E 4 HOH A 9 609 64 HOH HOH . 
E 4 HOH A 10 610 42 HOH HOH . 
E 4 HOH A 11 611 41 HOH HOH . 
E 4 HOH A 12 612 3 HOH HOH . 
E 4 HOH A 13 613 53 HOH HOH . 
E 4 HOH A 14 614 48 HOH HOH . 
E 4 HOH A 15 615 9 HOH HOH . 
E 4 HOH A 16 616 28 HOH HOH . 
E 4 HOH A 17 617 116 HOH HOH . 
E 4 HOH A 18 618 25 HOH HOH . 
E 4 HOH A 19 619 17 HOH HOH . 
E 4 HOH A 20 620 20 HOH HOH . 
E 4 HOH A 21 621 74 HOH HOH . 
E 4 HOH A 22 622 2 HOH HOH . 
E 4 HOH A 23 623 34 HOH HOH . 
E 4 HOH A 24 624 12 HOH HOH . 
E 4 HOH A 25 625 108 HOH HOH . 
E 4 HOH A 26 626 4 HOH HOH . 
E 4 HOH A 27 627 35 HOH HOH . 
E 4 HOH A 28 628 45 HOH HOH . 
E 4 HOH A 29 629 115 HOH HOH . 
E 4 HOH A 30 630 19 HOH HOH . 
E 4 HOH A 31 631 18 HOH HOH . 
E 4 HOH A 32 632 8 HOH HOH . 
E 4 HOH A 33 633 109 HOH HOH . 
E 4 HOH A 34 634 10 HOH HOH . 
E 4 HOH A 35 635 13 HOH HOH . 
E 4 HOH A 36 636 131 HOH HOH . 
E 4 HOH A 37 637 29 HOH HOH . 
E 4 HOH A 38 638 5 HOH HOH . 
E 4 HOH A 39 639 7 HOH HOH . 
E 4 HOH A 40 640 94 HOH HOH . 
E 4 HOH A 41 641 24 HOH HOH . 
E 4 HOH A 42 642 119 HOH HOH . 
E 4 HOH A 43 643 101 HOH HOH . 
E 4 HOH A 44 644 114 HOH HOH . 
E 4 HOH A 45 645 88 HOH HOH . 
E 4 HOH A 46 646 23 HOH HOH . 
E 4 HOH A 47 647 76 HOH HOH . 
E 4 HOH A 48 648 30 HOH HOH . 
E 4 HOH A 49 649 38 HOH HOH . 
E 4 HOH A 50 650 6 HOH HOH . 
E 4 HOH A 51 651 93 HOH HOH . 
E 4 HOH A 52 652 104 HOH HOH . 
E 4 HOH A 53 653 11 HOH HOH . 
E 4 HOH A 54 654 27 HOH HOH . 
E 4 HOH A 55 655 120 HOH HOH . 
E 4 HOH A 56 656 102 HOH HOH . 
E 4 HOH A 57 657 55 HOH HOH . 
E 4 HOH A 58 658 26 HOH HOH . 
E 4 HOH A 59 659 54 HOH HOH . 
E 4 HOH A 60 660 127 HOH HOH . 
E 4 HOH A 61 661 92 HOH HOH . 
E 4 HOH A 62 662 61 HOH HOH . 
E 4 HOH A 63 663 83 HOH HOH . 
E 4 HOH A 64 664 40 HOH HOH . 
E 4 HOH A 65 665 123 HOH HOH . 
E 4 HOH A 66 666 75 HOH HOH . 
E 4 HOH A 67 667 117 HOH HOH . 
E 4 HOH A 68 668 52 HOH HOH . 
E 4 HOH A 69 669 78 HOH HOH . 
E 4 HOH A 70 670 129 HOH HOH . 
E 4 HOH A 71 671 31 HOH HOH . 
E 4 HOH A 72 672 128 HOH HOH . 
E 4 HOH A 73 673 130 HOH HOH . 
E 4 HOH A 74 674 80 HOH HOH . 
E 4 HOH A 75 675 98 HOH HOH . 
E 4 HOH A 76 676 126 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . B 2 6.094 -0.98 -6.586 1 54.38 ? S DMS 501 A 1 
HETATM 2 O O DMS . . . B 2 7.064 -0.502 -7.649 1 53.63 ? O DMS 501 A 1 
HETATM 3 C C1 DMS . . . B 2 6.986 -0.997 -4.971 1 45.4 ? C1 DMS 501 A 1 
HETATM 4 C C2 DMS . . . B 2 5.683 -2.721 -6.765 1 48.56 ? C2 DMS 501 A 1 
HETATM 5 H H11 DMS . . . B 2 6.379 -1.458 -4.236 1 54.52 ? H11 DMS 501 A 1 
HETATM 6 H H12 DMS . . . B 2 7.203 -0.004 -4.677 1 54.52 ? H12 DMS 501 A 1 
HETATM 7 H H13 DMS . . . B 2 7.89 -1.54 -5.073 1 54.52 ? H13 DMS 501 A 1 
HETATM 8 H H21 DMS . . . B 2 4.982 -2.998 -6.021 1 58.31 ? H21 DMS 501 A 1 
HETATM 9 H H22 DMS . . . B 2 6.56 -3.304 -6.657 1 58.31 ? H22 DMS 501 A 1 
HETATM 10 H H23 DMS . . . B 2 5.264 -2.889 -7.723 1 58.31 ? H23 DMS 501 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           10 
#