data_7MIM # _model_server_result.job_id YfcIhUDnqICOnT6audP2GA _model_server_result.datetime_utc '2024-11-04 22:38:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mim # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":910}' # _entry.id 7MIM # _exptl.entry_id 7MIM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MIM _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MIM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 N N N ? 3 O N N ? 3 P N N ? 3 RA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 612 A CYS 612 1_555 A SG CYS 619 A CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 612 B CYS 612 1_555 B SG CYS 619 B CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 612 C CYS 612 1_555 C SG CYS 619 C CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 612 D CYS 612 1_555 D SG CYS 619 D CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A O GLY 638 A GLY 638 1_555 O NA NA . A NA 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc2 O NA NA . A NA 911 1_555 B O GLY 638 B GLY 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc3 O NA NA . A NA 911 1_555 C O GLY 638 C GLY 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc4 O NA NA . A NA 911 1_555 D O GLY 638 D GLY 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7MIM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 POV A 1 901 805 POV POV . F 2 POV A 1 902 806 POV POV . G 2 POV A 1 903 808 POV POV . H 2 POV A 1 904 801 POV POV . I 2 POV A 1 905 802 POV POV . J 2 POV A 1 906 803 POV POV . K 2 POV A 1 907 804 POV POV . L 2 POV A 1 908 807 POV POV . M 2 POV A 1 909 809 POV POV . N 3 NA A 1 910 1 NA NA . O 3 NA A 1 911 2 NA NA . P 3 NA A 1 912 3 NA NA . Q 2 POV B 1 901 803 POV POV . R 2 POV B 1 902 804 POV POV . S 2 POV B 1 903 807 POV POV . T 2 POV B 1 904 809 POV POV . U 2 POV B 1 905 805 POV POV . V 2 POV B 1 906 806 POV POV . W 2 POV B 1 907 808 POV POV . X 2 POV B 1 908 801 POV POV . Y 2 POV B 1 909 802 POV POV . Z 2 POV C 1 901 803 POV POV . AA 2 POV C 1 902 804 POV POV . BA 2 POV C 1 903 807 POV POV . CA 2 POV C 1 904 809 POV POV . DA 2 POV C 1 905 805 POV POV . EA 2 POV C 1 906 806 POV POV . FA 2 POV C 1 907 808 POV POV . GA 2 POV C 1 908 801 POV POV . HA 2 POV C 1 909 802 POV POV . IA 2 POV D 1 901 801 POV POV . JA 2 POV D 1 902 802 POV POV . KA 2 POV D 1 903 803 POV POV . LA 2 POV D 1 904 804 POV POV . MA 2 POV D 1 905 807 POV POV . NA 2 POV D 1 906 809 POV POV . OA 2 POV D 1 907 805 POV POV . PA 2 POV D 1 908 806 POV POV . QA 2 POV D 1 909 808 POV POV . RA 3 NA D 1 910 4 NA NA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 3 _atom_site.Cartn_x 141.44 _atom_site.Cartn_y 141.44 _atom_site.Cartn_z 112.301 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 58.03 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 910 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #