data_7MIS
#
_model_server_result.job_id            HKluoD-HzpclZk4NKu4ILg 
_model_server_result.datetime_utc      '2025-04-19 02:53:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mis 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":2000}' 
#
_entry.id    7MIS 
#
_exptl.entry_id    7MIS 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7MIS 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MIS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 439 A ASN 534 1_555 F MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
metalc ? metalc2 A OD2 ASP 447 A ASP 542 1_555 E MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc3 A OD2 ASP 447 A ASP 542 1_555 F MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? 
metalc ? metalc4 A OD2 ASP 450 A ASP 545 1_555 E MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc5 D O2B ATP . A ATP 1001 1_555 E MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc6 D O1G ATP . A ATP 1001 1_555 F MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? 
metalc ? metalc7 D O1B ATP . A ATP 1001 1_555 F MG MG . A MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? 
metalc ? metalc8 B OD1 ASP 22 B ASP 21 1_555 H CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc9 B OD1 ASP 24 B ASP 23 1_555 H CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc10 B OD1 ASP 26 B ASP 25 1_555 H CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? 
metalc ? metalc11 B OD2 ASP 26 B ASP 25 1_555 H CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc12 B O THR 28 B THR 27 1_555 H CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     7MIS 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 ATP A 1 1001 1001 ATP ATP . 
E 5 MG A 1 1002 1002 MG MG . 
F 5 MG A 1 1003 1003 MG MG . 
G 6 NA A 1 1004 1 NA NA . 
H 7 CA B 1 201 201 CA CA . 
I 8 AMP C 1 2000 2000 AMP AMP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . I 8 223.341 203.776 216.987 1 16.03 ? P AMP 2000 C 1 
HETATM 2 O O1P AMP . . . I 8 222.476 203.078 215.941 1 16.03 ? O1P AMP 2000 C 1 
HETATM 3 O O2P AMP . . . I 8 223.552 203.085 218.278 1 16.03 ? O2P AMP 2000 C 1 
HETATM 4 O O3P AMP . . . I 8 224.656 204.145 216.308 1 16.03 ? O3P AMP 2000 C 1 
HETATM 5 O O5' AMP . . . I 8 222.638 205.163 217.323 1 16.03 ? O5' AMP 2000 C 1 
HETATM 6 C C5' AMP . . . I 8 221.49 205.224 218.163 1 16.03 ? C5' AMP 2000 C 1 
HETATM 7 C C4' AMP . . . I 8 221.507 206.457 219.033 1 16.03 ? C4' AMP 2000 C 1 
HETATM 8 O O4' AMP . . . I 8 222.542 206.313 220.041 1 16.03 ? O4' AMP 2000 C 1 
HETATM 9 C C3' AMP . . . I 8 221.811 207.76 218.305 1 16.03 ? C3' AMP 2000 C 1 
HETATM 10 O O3' AMP . . . I 8 221.139 208.833 218.96 1 16.03 ? O3' AMP 2000 C 1 
HETATM 11 C C2' AMP . . . I 8 223.316 207.905 218.5 1 16.03 ? C2' AMP 2000 C 1 
HETATM 12 O O2' AMP . . . I 8 223.785 209.231 218.398 1 16.03 ? O2' AMP 2000 C 1 
HETATM 13 C C1' AMP . . . I 8 223.487 207.36 219.913 1 16.03 ? C1' AMP 2000 C 1 
HETATM 14 N N9 AMP . . . I 8 224.81 206.799 220.199 1 16.03 ? N9 AMP 2000 C 1 
HETATM 15 C C8 AMP . . . I 8 225.618 206.1 219.34 1 16.03 ? C8 AMP 2000 C 1 
HETATM 16 N N7 AMP . . . I 8 226.695 205.61 219.899 1 16.03 ? N7 AMP 2000 C 1 
HETATM 17 C C5 AMP . . . I 8 226.595 206.02 221.222 1 16.03 ? C5 AMP 2000 C 1 
HETATM 18 C C6 AMP . . . I 8 227.407 205.802 222.347 1 16.03 ? C6 AMP 2000 C 1 
HETATM 19 N N6 AMP . . . I 8 228.513 205.057 222.288 1 16.03 ? N6 AMP 2000 C 1 
HETATM 20 N N1 AMP . . . I 8 227.023 206.344 223.522 1 16.03 ? N1 AMP 2000 C 1 
HETATM 21 C C2 AMP . . . I 8 225.894 207.057 223.556 1 16.03 ? C2 AMP 2000 C 1 
HETATM 22 N N3 AMP . . . I 8 225.042 207.322 222.562 1 16.03 ? N3 AMP 2000 C 1 
HETATM 23 C C4 AMP . . . I 8 225.448 206.766 221.414 1 16.03 ? C4 AMP 2000 C 1 
HETATM 24 H "H5'1" AMP . . . I 8 220.632 205.22 217.492 1 16.03 ? "H5'1" AMP 2000 C 1 
HETATM 25 H "H5'2" AMP . . . I 8 221.398 204.337 218.788 1 16.03 ? "H5'2" AMP 2000 C 1 
HETATM 26 H H4' AMP . . . I 8 220.589 206.523 219.615 1 16.03 ? H4' AMP 2000 C 1 
HETATM 27 H H3' AMP . . . I 8 221.53 207.729 217.254 1 16.03 ? H3' AMP 2000 C 1 
HETATM 28 H HO3' AMP . . . I 8 221.346 209.659 218.449 1 16.03 ? HO3' AMP 2000 C 1 
HETATM 29 H H2' AMP . . . I 8 223.836 207.308 217.752 1 16.03 ? H2' AMP 2000 C 1 
HETATM 30 H HO2' AMP . . . I 8 223.577 209.544 217.478 1 16.03 ? HO2' AMP 2000 C 1 
HETATM 31 H H1' AMP . . . I 8 223.265 208.104 220.676 1 16.03 ? H1' AMP 2000 C 1 
HETATM 32 H H8 AMP . . . I 8 225.372 205.972 218.287 1 16.03 ? H8 AMP 2000 C 1 
HETATM 33 H HN61 AMP . . . I 8 229.084 204.921 223.116 1 16.03 ? HN61 AMP 2000 C 1 
HETATM 34 H HN62 AMP . . . I 8 228.808 204.614 221.424 1 16.03 ? HN62 AMP 2000 C 1 
HETATM 35 H H2 AMP . . . I 8 225.643 207.473 224.53 1 16.03 ? H2 AMP 2000 C 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    48 
_model_server_stats.query_time_ms           690 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           35 
#