data_7MIT # _model_server_result.job_id xn1TK9OUHFABXrSptIKRqg _model_server_result.datetime_utc '2024-12-21 14:35:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mit # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":503}' # _entry.id 7MIT # _exptl.entry_id 7MIT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 39.098 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MIT _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 X N N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n F NAG 1 N 1 NAG N 601 NAG 3 n F NAG 2 N 2 NAG N 602 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 120 A CYS 120 1_555 A SG CYS 152 A CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 120 B CYS 120 1_555 B SG CYS 152 B CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 C SG CYS 120 C CYS 120 1_555 C SG CYS 152 C CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 D SG CYS 120 D CYS 120 1_555 D SG CYS 152 D CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 24 E CYS 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale1 E ND2 ASN 9 E ASN 9 1_555 F C1 NAG . N NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 F O4 NAG . N NAG 1 1_555 F C1 NAG . N NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? metalc ? metalc1 A O THR 140 A THR 140 1_555 X K K . D K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? metalc ? metalc2 A O ILE 141 A ILE 141 1_555 G K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc3 A O GLY 142 A GLY 142 1_555 G K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? metalc ? metalc4 A O GLY 142 A GLY 142 1_555 I K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc5 A O PHE 143 A PHE 143 1_555 I K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? metalc ? metalc6 G K K . A K 501 1_555 B O ILE 141 B ILE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc7 G K K . A K 501 1_555 B O GLY 142 B GLY 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.147 ? metalc ? metalc8 G K K . A K 501 1_555 C O ILE 141 C ILE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc9 G K K . A K 501 1_555 C O GLY 142 C GLY 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? metalc ? metalc10 G K K . A K 501 1_555 D O ILE 141 D ILE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc11 G K K . A K 501 1_555 D O GLY 142 D GLY 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc12 I K K . A K 503 1_555 B O GLY 142 B GLY 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? metalc ? metalc13 I K K . A K 503 1_555 B O PHE 143 B PHE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? metalc ? metalc14 I K K . A K 503 1_555 C O GLY 142 C GLY 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.207 ? metalc ? metalc15 I K K . A K 503 1_555 C O PHE 143 C PHE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.91 ? metalc ? metalc16 I K K . A K 503 1_555 D O GLY 142 D GLY 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.245 ? metalc ? metalc17 I K K . A K 503 1_555 D O PHE 143 D PHE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? metalc ? metalc18 B O THR 140 B THR 140 1_555 X K K . D K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc19 C O THR 140 C THR 140 1_555 X K K . D K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc20 D O THR 140 D THR 140 1_555 X K K . D K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc21 D OG1 THR 140 D THR 140 1_555 X K K . D K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.236 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7MIT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 K A 1 501 2 K K . H 4 K A 1 502 3 K K . I 4 K A 1 503 4 K K . J 5 ATP A 1 504 401 ATP ATP . K 6 POV A 1 505 501 POV POV . L 7 PTY A 1 506 1611 PTY PTY . M 6 POV A 1 507 2221 POV POV . N 8 P5S A 1 508 4004 P5S P5S . O 5 ATP B 1 501 402 ATP ATP . P 5 ATP B 1 502 403 ATP ATP . Q 6 POV B 1 503 601 POV POV . R 8 P5S B 1 504 1002 P5S P5S . S 5 ATP C 1 501 404 ATP ATP . T 6 POV C 1 502 701 POV POV . U 8 P5S C 1 503 801 P5S P5S . V 6 POV C 1 504 901 POV POV . W 6 POV C 1 505 2002 POV POV . X 4 K D 1 501 1 K K . Y 8 P5S D 1 502 701 P5S P5S . Z 6 POV D 1 503 801 POV POV . AA 6 POV D 1 504 2301 POV POV . BA 5 ATP E 1 1601 405 ATP ATP . CA 9 GBM E 1 1602 2101 GBM GBM . DA 7 PTY E 1 1603 1801 PTY PTY . EA 7 PTY E 1 1604 2001 PTY PTY . FA 7 PTY E 1 1605 2201 PTY PTY . GA 7 PTY E 1 1606 2401 PTY PTY . HA 8 P5S E 1 1607 2601 P5S P5S . IA 7 PTY E 1 1608 2701 PTY PTY . JA 8 P5S E 1 1609 3001 P5S P5S . KA 7 PTY E 1 1610 3601 PTY PTY . LA 7 PTY E 1 1611 4001 PTY PTY . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x 203.382 _atom_site.Cartn_y 198.816 _atom_site.Cartn_z 249.833 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 54 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #