data_7MJY # _model_server_result.job_id yTuXLbfoRT4Jeq_dr2CLCg _model_server_result.datetime_utc '2024-11-02 03:27:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mjy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":612}' # _entry.id 7MJY # _exptl.entry_id 7MJY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MJY _cell.length_a 53.834 _cell.length_b 79.982 _cell.length_c 110.137 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MJY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 27 A CYS 27 1_555 M FE4 F3S . A F3S 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc2 A SG CYS 63 A CYS 63 1_555 M FE1 F3S . A F3S 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc3 A SG CYS 97 A CYS 97 1_555 M FE3 F3S . A F3S 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc4 A SG CYS 171 A CYS 171 1_555 N FE4 SF4 . A SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc5 A SG CYS 175 A CYS 175 1_555 N FE1 SF4 . A SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc6 A SG CYS 178 A CYS 178 1_555 N FE3 SF4 . A SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc7 N FE2 SF4 . A SF4 612 1_555 O N SAH . A SAH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc8 N FE2 SF4 . A SF4 612 1_555 O O SAH . A SAH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 501 n n FE1 S3 SF4 sing 502 n n FE1 S4 SF4 sing 503 n n FE2 S1 SF4 sing 504 n n FE2 S3 SF4 sing 505 n n FE2 S4 SF4 sing 506 n n FE3 S1 SF4 sing 507 n n FE3 S2 SF4 sing 508 n n FE3 S4 SF4 sing 509 n n FE4 S1 SF4 sing 510 n n FE4 S2 SF4 sing 511 n n FE4 S3 SF4 sing 512 n n # _atom_sites.entry_id 7MJY _atom_sites.fract_transf_matrix[1][1] 0.018576 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012503 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00908 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PGE A 1 601 601 PGE PGE . D 3 PGE A 1 602 801 PGE PGE . E 3 PGE A 1 603 1001 PGE PGE . F 4 PEG A 1 604 1101 PEG PEG . G 4 PEG A 1 605 1201 PEG PEG . H 4 PEG A 1 606 1301 PEG PEG . I 4 PEG A 1 607 1501 PEG PEG . J 4 PEG A 1 608 1601 PEG PEG . K 4 PEG A 1 609 1701 PEG PEG . L 4 PEG A 1 610 1801 PEG PEG . M 5 F3S A 1 611 1901 F3S F3S . N 6 SF4 A 1 612 2 SF4 SF4 . O 7 SAH A 1 613 1 SAH SAH . P 8 CL A 1 614 1 CL CL . Q 9 HOH A 1 701 2 HOH HOH . Q 9 HOH A 2 702 150 HOH HOH . Q 9 HOH A 3 703 169 HOH HOH . Q 9 HOH A 4 704 112 HOH HOH . Q 9 HOH A 5 705 70 HOH HOH . Q 9 HOH A 6 706 51 HOH HOH . Q 9 HOH A 7 707 42 HOH HOH . Q 9 HOH A 8 708 90 HOH HOH . Q 9 HOH A 9 709 72 HOH HOH . Q 9 HOH A 10 710 89 HOH HOH . Q 9 HOH A 11 711 128 HOH HOH . Q 9 HOH A 12 712 12 HOH HOH . Q 9 HOH A 13 713 139 HOH HOH . Q 9 HOH A 14 714 64 HOH HOH . Q 9 HOH A 15 715 16 HOH HOH . Q 9 HOH A 16 716 9 HOH HOH . Q 9 HOH A 17 717 120 HOH HOH . Q 9 HOH A 18 718 26 HOH HOH . Q 9 HOH A 19 719 18 HOH HOH . Q 9 HOH A 20 720 83 HOH HOH . Q 9 HOH A 21 721 10 HOH HOH . Q 9 HOH A 22 722 115 HOH HOH . Q 9 HOH A 23 723 52 HOH HOH . Q 9 HOH A 24 724 74 HOH HOH . Q 9 HOH A 25 725 29 HOH HOH . Q 9 HOH A 26 726 17 HOH HOH . Q 9 HOH A 27 727 6 HOH HOH . Q 9 HOH A 28 728 36 HOH HOH . Q 9 HOH A 29 729 45 HOH HOH . Q 9 HOH A 30 730 37 HOH HOH . Q 9 HOH A 31 731 84 HOH HOH . Q 9 HOH A 32 732 152 HOH HOH . Q 9 HOH A 33 733 80 HOH HOH . Q 9 HOH A 34 734 11 HOH HOH . Q 9 HOH A 35 735 69 HOH HOH . Q 9 HOH A 36 736 39 HOH HOH . Q 9 HOH A 37 737 20 HOH HOH . Q 9 HOH A 38 738 30 HOH HOH . Q 9 HOH A 39 739 31 HOH HOH . Q 9 HOH A 40 740 165 HOH HOH . Q 9 HOH A 41 741 124 HOH HOH . Q 9 HOH A 42 742 48 HOH HOH . Q 9 HOH A 43 743 8 HOH HOH . Q 9 HOH A 44 744 211 HOH HOH . Q 9 HOH A 45 745 55 HOH HOH . Q 9 HOH A 46 746 155 HOH HOH . Q 9 HOH A 47 747 91 HOH HOH . Q 9 HOH A 48 748 85 HOH HOH . Q 9 HOH A 49 749 5 HOH HOH . Q 9 HOH A 50 750 206 HOH HOH . Q 9 HOH A 51 751 88 HOH HOH . Q 9 HOH A 52 752 60 HOH HOH . Q 9 HOH A 53 753 21 HOH HOH . Q 9 HOH A 54 754 38 HOH HOH . Q 9 HOH A 55 755 212 HOH HOH . Q 9 HOH A 56 756 68 HOH HOH . Q 9 HOH A 57 757 34 HOH HOH . Q 9 HOH A 58 758 126 HOH HOH . Q 9 HOH A 59 759 19 HOH HOH . Q 9 HOH A 60 760 33 HOH HOH . Q 9 HOH A 61 761 94 HOH HOH . Q 9 HOH A 62 762 49 HOH HOH . Q 9 HOH A 63 763 111 HOH HOH . Q 9 HOH A 64 764 47 HOH HOH . Q 9 HOH A 65 765 14 HOH HOH . Q 9 HOH A 66 766 127 HOH HOH . Q 9 HOH A 67 767 22 HOH HOH . Q 9 HOH A 68 768 98 HOH HOH . Q 9 HOH A 69 769 107 HOH HOH . Q 9 HOH A 70 770 27 HOH HOH . Q 9 HOH A 71 771 40 HOH HOH . Q 9 HOH A 72 772 75 HOH HOH . Q 9 HOH A 73 773 24 HOH HOH . Q 9 HOH A 74 774 25 HOH HOH . Q 9 HOH A 75 775 105 HOH HOH . Q 9 HOH A 76 776 181 HOH HOH . Q 9 HOH A 77 777 56 HOH HOH . Q 9 HOH A 78 778 119 HOH HOH . Q 9 HOH A 79 779 86 HOH HOH . Q 9 HOH A 80 780 46 HOH HOH . Q 9 HOH A 81 781 54 HOH HOH . Q 9 HOH A 82 782 13 HOH HOH . Q 9 HOH A 83 783 59 HOH HOH . Q 9 HOH A 84 784 122 HOH HOH . Q 9 HOH A 85 785 58 HOH HOH . Q 9 HOH A 86 786 3 HOH HOH . Q 9 HOH A 87 787 176 HOH HOH . Q 9 HOH A 88 788 7 HOH HOH . Q 9 HOH A 89 789 77 HOH HOH . Q 9 HOH A 90 790 95 HOH HOH . Q 9 HOH A 91 791 61 HOH HOH . Q 9 HOH A 92 792 137 HOH HOH . Q 9 HOH A 93 793 110 HOH HOH . Q 9 HOH A 94 794 179 HOH HOH . Q 9 HOH A 95 795 4 HOH HOH . Q 9 HOH A 96 796 41 HOH HOH . Q 9 HOH A 97 797 121 HOH HOH . Q 9 HOH A 98 798 35 HOH HOH . Q 9 HOH A 99 799 164 HOH HOH . Q 9 HOH A 100 800 99 HOH HOH . Q 9 HOH A 101 801 123 HOH HOH . Q 9 HOH A 102 802 57 HOH HOH . Q 9 HOH A 103 803 43 HOH HOH . Q 9 HOH A 104 804 32 HOH HOH . Q 9 HOH A 105 805 15 HOH HOH . Q 9 HOH A 106 806 73 HOH HOH . Q 9 HOH A 107 807 185 HOH HOH . Q 9 HOH A 108 808 103 HOH HOH . Q 9 HOH A 109 809 53 HOH HOH . Q 9 HOH A 110 810 23 HOH HOH . Q 9 HOH A 111 811 167 HOH HOH . Q 9 HOH A 112 812 190 HOH HOH . Q 9 HOH A 113 813 65 HOH HOH . Q 9 HOH A 114 814 168 HOH HOH . Q 9 HOH A 115 815 63 HOH HOH . Q 9 HOH A 116 816 117 HOH HOH . Q 9 HOH A 117 817 76 HOH HOH . Q 9 HOH A 118 818 97 HOH HOH . Q 9 HOH A 119 819 191 HOH HOH . Q 9 HOH A 120 820 108 HOH HOH . Q 9 HOH A 121 821 28 HOH HOH . Q 9 HOH A 122 822 102 HOH HOH . Q 9 HOH A 123 823 44 HOH HOH . Q 9 HOH A 124 824 50 HOH HOH . Q 9 HOH A 125 825 67 HOH HOH . Q 9 HOH A 126 826 118 HOH HOH . Q 9 HOH A 127 827 203 HOH HOH . Q 9 HOH A 128 828 180 HOH HOH . Q 9 HOH A 129 829 174 HOH HOH . Q 9 HOH A 130 830 154 HOH HOH . Q 9 HOH A 131 831 166 HOH HOH . Q 9 HOH A 132 832 114 HOH HOH . Q 9 HOH A 133 833 184 HOH HOH . Q 9 HOH A 134 834 100 HOH HOH . Q 9 HOH A 135 835 78 HOH HOH . Q 9 HOH A 136 836 172 HOH HOH . Q 9 HOH A 137 837 106 HOH HOH . Q 9 HOH A 138 838 162 HOH HOH . Q 9 HOH A 139 839 131 HOH HOH . Q 9 HOH A 140 840 187 HOH HOH . Q 9 HOH A 141 841 82 HOH HOH . Q 9 HOH A 142 842 173 HOH HOH . Q 9 HOH A 143 843 116 HOH HOH . Q 9 HOH A 144 844 125 HOH HOH . Q 9 HOH A 145 845 214 HOH HOH . Q 9 HOH A 146 846 208 HOH HOH . Q 9 HOH A 147 847 93 HOH HOH . Q 9 HOH A 148 848 221 HOH HOH . Q 9 HOH A 149 849 151 HOH HOH . Q 9 HOH A 150 850 138 HOH HOH . Q 9 HOH A 151 851 197 HOH HOH . Q 9 HOH A 152 852 216 HOH HOH . Q 9 HOH A 153 853 109 HOH HOH . Q 9 HOH A 154 854 200 HOH HOH . Q 9 HOH A 155 855 183 HOH HOH . Q 9 HOH A 156 856 207 HOH HOH . Q 9 HOH A 157 857 136 HOH HOH . Q 9 HOH A 158 858 81 HOH HOH . Q 9 HOH A 159 859 170 HOH HOH . Q 9 HOH A 160 860 209 HOH HOH . Q 9 HOH A 161 861 219 HOH HOH . Q 9 HOH A 162 862 133 HOH HOH . Q 9 HOH A 163 863 204 HOH HOH . Q 9 HOH A 164 864 201 HOH HOH . Q 9 HOH A 165 865 202 HOH HOH . Q 9 HOH A 166 866 153 HOH HOH . Q 9 HOH A 167 867 196 HOH HOH . Q 9 HOH A 168 868 210 HOH HOH . Q 9 HOH A 169 869 220 HOH HOH . Q 9 HOH A 170 870 217 HOH HOH . Q 9 HOH A 171 871 158 HOH HOH . Q 9 HOH A 172 872 198 HOH HOH . Q 9 HOH A 173 873 178 HOH HOH . Q 9 HOH A 174 874 199 HOH HOH . Q 9 HOH A 175 875 135 HOH HOH . Q 9 HOH A 176 876 113 HOH HOH . Q 9 HOH A 177 877 215 HOH HOH . Q 9 HOH A 178 878 205 HOH HOH . Q 9 HOH A 179 879 182 HOH HOH . Q 9 HOH A 180 880 194 HOH HOH . Q 9 HOH A 181 881 186 HOH HOH . Q 9 HOH A 182 882 218 HOH HOH . R 9 HOH M 1 101 161 HOH HOH . R 9 HOH M 2 102 104 HOH HOH . R 9 HOH M 3 103 171 HOH HOH . R 9 HOH M 4 104 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . N 6 -18.709 -8.874 -15.6 1 15.73 ? FE1 SF4 612 A 1 HETATM 2 FE FE2 SF4 . . . N 6 -20.273 -6.761 -14.915 1 16.35 ? FE2 SF4 612 A 1 HETATM 3 FE FE3 SF4 . . . N 6 -19.196 -8.469 -13.011 1 14.82 ? FE3 SF4 612 A 1 HETATM 4 FE FE4 SF4 . . . N 6 -21.201 -9.341 -14.657 1 15.32 ? FE4 SF4 612 A 1 HETATM 5 S S1 SF4 . . . N 6 -21.356 -7.755 -13.102 1 12.74 ? S1 SF4 612 A 1 HETATM 6 S S2 SF4 . . . N 6 -19.29 -10.464 -14.055 1 14.72 ? S2 SF4 612 A 1 HETATM 7 S S3 SF4 . . . N 6 -20.647 -8.227 -16.591 1 15.82 ? S3 SF4 612 A 1 HETATM 8 S S4 SF4 . . . N 6 -18.057 -7.04 -14.413 1 14.26 ? S4 SF4 612 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #