data_7MKX
#
_model_server_result.job_id            zHVl9i9pqKKVxgZU4uF7hg 
_model_server_result.datetime_utc      '2025-08-01 03:03:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mkx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":301}' 
#
_entry.id    7MKX 
#
_exptl.entry_id    7MKX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              520.335 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[(5-bromo-2-{4-[(cyanomethyl)sulfamoyl]anilino}pyrimidin-4-yl)amino]-6-fluorobenzamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7MKX 
_cell.length_a            161.05 
_cell.length_b            161.52 
_cell.length_c            65.76 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MKX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E 1 1 
C,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C TYR 164 A TYR 159 1_555 A N TPO 165 A TPO 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C TPO 165 A TPO 160 1_555 A N HIS 166 A HIS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 C C TYR 164 C TYR 159 1_555 C N TPO 165 C TPO 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale4 C C TPO 165 C TPO 160 1_555 C N HIS 166 C HIS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C19 H15 Br F N7 O3 S' 
_chem_comp.formula_weight    520.335 
_chem_comp.id                ZGY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[(5-bromo-2-{4-[(cyanomethyl)sulfamoyl]anilino}pyrimidin-4-yl)amino]-6-fluorobenzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
BR1 C11 ZGY sing 395 n n 
N6 C15 ZGY sing 396 n n 
O2 C15 ZGY doub 397 n n 
C15 C14 ZGY sing 398 n n 
C11 C10 ZGY doub 399 n y 
C11 C12 ZGY sing 400 n y 
C10 N4 ZGY sing 401 n y 
N5 C12 ZGY sing 402 n n 
N5 C13 ZGY sing 403 n n 
C12 N7 ZGY doub 404 n y 
C14 C13 ZGY doub 405 n y 
C14 C16 ZGY sing 406 n y 
N4 C9 ZGY doub 407 n y 
F1 C16 ZGY sing 408 n n 
C13 C19 ZGY sing 409 n y 
C16 C17 ZGY doub 410 n y 
N7 C9 ZGY sing 411 n y 
C9 N3 ZGY sing 412 n n 
C19 C18 ZGY doub 413 n y 
N3 C8 ZGY sing 414 n n 
C17 C18 ZGY sing 415 n y 
C5 C8 ZGY doub 416 n y 
C5 C4 ZGY sing 417 n y 
C8 C7 ZGY sing 418 n y 
C4 C3 ZGY doub 419 n y 
C7 C6 ZGY doub 420 n y 
C3 C6 ZGY sing 421 n y 
C3 S1 ZGY sing 422 n n 
O3 S1 ZGY doub 423 n n 
S1 N1 ZGY sing 424 n n 
S1 O1 ZGY doub 425 n n 
N1 C1 ZGY sing 426 n n 
C1 C2 ZGY sing 427 n n 
C2 N2 ZGY trip 428 n n 
N1 H1 ZGY sing 429 n n 
N3 H8 ZGY sing 430 n n 
C4 H4 ZGY sing 431 n n 
C5 H5 ZGY sing 432 n n 
C6 H6 ZGY sing 433 n n 
C7 H7 ZGY sing 434 n n 
C10 H9 ZGY sing 435 n n 
C17 H13 ZGY sing 436 n n 
C1 H2 ZGY sing 437 n n 
C1 H3 ZGY sing 438 n n 
C18 H14 ZGY sing 439 n n 
C19 H15 ZGY sing 440 n n 
N5 H10 ZGY sing 441 n n 
N6 H12 ZGY sing 442 n n 
N6 H11 ZGY sing 443 n n 
#
_atom_sites.entry_id                     7MKX 
_atom_sites.fract_transf_matrix[1][1]    0.006209 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006191 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015207 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ZGY A 1 301 301 ZGY LIG . 
F 3 ZGY C 1 301 301 ZGY LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 ZGY . . . F 3 -69.677 74.745 -49.609 1 80.94 ? N1 ZGY 301 C 1 
HETATM 2 N N3 ZGY . . . F 3 -74.583 71.04 -47.239 1 83.44 ? N3 ZGY 301 C 1 
HETATM 3 C C4 ZGY . . . F 3 -71.384 72.669 -48.213 1 85.72 ? C4 ZGY 301 C 1 
HETATM 4 C C5 ZGY . . . F 3 -72.328 71.691 -47.976 1 89.5 ? C5 ZGY 301 C 1 
HETATM 5 C C6 ZGY . . . F 3 -72.939 74.348 -47.474 1 84.96 ? C6 ZGY 301 C 1 
HETATM 6 C C7 ZGY . . . F 3 -73.883 73.369 -47.236 1 81.38 ? C7 ZGY 301 C 1 
HETATM 7 C C8 ZGY . . . F 3 -73.596 72.025 -47.492 1 87.73 ? C8 ZGY 301 C 1 
HETATM 8 C C10 ZGY . . . F 3 -75.379 67.615 -46.957 1 106.9 ? C10 ZGY 301 C 1 
HETATM 9 C C13 ZGY . . . F 3 -71.681 68.161 -50.13 1 93.99 ? C13 ZGY 301 C 1 
HETATM 10 C C15 ZGY . . . F 3 -70.276 66.09 -49.899 1 95.78 ? C15 ZGY 301 C 1 
HETATM 11 C C17 ZGY . . . F 3 -69.539 69.525 -51.326 1 99.49 ? C17 ZGY 301 C 1 
HETATM 12 C C1 ZGY . . . F 3 -68.785 75.669 -50.321 1 90.63 ? C1 ZGY 301 C 1 
HETATM 13 C C11 ZGY . . . F 3 -74.523 67.053 -47.88 1 103.68 ? C11 ZGY 301 C 1 
HETATM 14 C C12 ZGY . . . F 3 -73.669 67.911 -48.586 1 105.19 ? C12 ZGY 301 C 1 
HETATM 15 C C14 ZGY . . . F 3 -70.44 67.514 -50.331 1 92.26 ? C14 ZGY 301 C 1 
HETATM 16 C C16 ZGY . . . F 3 -69.407 68.217 -50.924 1 98.14 ? C16 ZGY 301 C 1 
HETATM 17 C C18 ZGY . . . F 3 -70.753 70.154 -51.13 1 93.32 ? C18 ZGY 301 C 1 
HETATM 18 C C19 ZGY . . . F 3 -71.819 69.492 -50.545 1 90.22 ? C19 ZGY 301 C 1 
HETATM 19 C C2 ZGY . . . F 3 -69.532 76.76 -50.963 1 110.6 ? C2 ZGY 301 C 1 
HETATM 20 C C3 ZGY . . . F 3 -71.686 73.997 -47.958 1 93.86 ? C3 ZGY 301 C 1 
HETATM 21 C C9 ZGY . . . F 3 -74.558 69.701 -47.442 1 85.89 ? C9 ZGY 301 C 1 
HETATM 22 F F1 ZGY . . . F 3 -68.214 67.609 -51.122 1 96.18 ? F1 ZGY 301 C 1 
HETATM 23 N N2 ZGY . . . F 3 -70.139 77.621 -51.418 1 113.84 ? N2 ZGY 301 C 1 
HETATM 24 N N4 ZGY . . . F 3 -75.414 68.934 -46.736 1 95.74 ? N4 ZGY 301 C 1 
HETATM 25 N N5 ZGY . . . F 3 -72.768 67.466 -49.524 1 110.11 ? N5 ZGY 301 C 1 
HETATM 26 N N6 ZGY . . . F 3 -69.179 65.772 -49.228 1 97.55 ? N6 ZGY 301 C 1 
HETATM 27 N N7 ZGY . . . F 3 -73.706 69.228 -48.368 1 88.18 ? N7 ZGY 301 C 1 
HETATM 28 O O1 ZGY . . . F 3 -71.148 76.442 -48.615 1 81.35 ? O1 ZGY 301 C 1 
HETATM 29 O O2 ZGY . . . F 3 -71.137 65.24 -50.176 1 105.17 ? O2 ZGY 301 C 1 
HETATM 30 O O3 ZGY . . . F 3 -69.531 75.214 -47.198 1 81 ? O3 ZGY 301 C 1 
HETATM 31 S S1 ZGY . . . F 3 -70.467 75.228 -48.279 1 84.61 ? S1 ZGY 301 C 1 
HETATM 32 BR BR1 ZGY . . . F 3 -74.511 65.177 -48.16 1 367.87 ? BR1 ZGY 301 C 1 
HETATM 33 H H1 ZGY . . . F 3 -70.211 74.328 -50.173 1 97.95 ? H1 ZGY 301 C 1 
HETATM 34 H H8 ZGY . . . F 3 -75.329 71.34 -46.897 1 100.95 ? H8 ZGY 301 C 1 
HETATM 35 H H4 ZGY . . . F 3 -70.537 72.432 -48.547 1 103.69 ? H4 ZGY 301 C 1 
HETATM 36 H H5 ZGY . . . F 3 -72.119 70.788 -48.142 1 108.22 ? H5 ZGY 301 C 1 
HETATM 37 H H6 ZGY . . . F 3 -73.146 75.251 -47.307 1 102.77 ? H6 ZGY 301 C 1 
HETATM 38 H H7 ZGY . . . F 3 -74.729 73.606 -46.897 1 98.48 ? H7 ZGY 301 C 1 
HETATM 39 H H9 ZGY . . . F 3 -75.962 67.058 -46.462 1 129.1 ? H9 ZGY 301 C 1 
HETATM 40 H H13 ZGY . . . F 3 -68.819 69.979 -51.726 1 120.21 ? H13 ZGY 301 C 1 
HETATM 41 H H2 ZGY . . . F 3 -68.284 75.174 -51.004 1 109.57 ? H2 ZGY 301 C 1 
HETATM 42 H H3 ZGY . . . F 3 -68.138 76.048 -49.688 1 109.57 ? H3 ZGY 301 C 1 
HETATM 43 H H14 ZGY . . . F 3 -70.857 71.051 -51.4 1 112.81 ? H14 ZGY 301 C 1 
HETATM 44 H H15 ZGY . . . F 3 -72.641 69.936 -50.423 1 109.09 ? H15 ZGY 301 C 1 
HETATM 45 H H10 ZGY . . . F 3 -72.893 66.632 -49.777 1 132.95 ? H10 ZGY 301 C 1 
HETATM 46 H H12 ZGY . . . F 3 -69.042 64.933 -48.963 1 117.88 ? H12 ZGY 301 C 1 
HETATM 47 H H11 ZGY . . . F 3 -68.573 66.397 -49.038 1 117.88 ? H11 ZGY 301 C 1 
#
_model_server_stats.io_time_ms              137 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           47 
#