data_7MLP # _model_server_result.job_id DI311wAlwZhclh8ZYq3O4g _model_server_result.datetime_utc '2024-10-20 20:14:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mlp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7MLP # _exptl.entry_id 7MLP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.25 _cell.angle_gamma 90 _cell.entry_id 7MLP _cell.length_a 38.658 _cell.length_b 77.867 _cell.length_c 53.244 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MLP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 41 A HIS 40 1_555 J ZN ZN . A ZN 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc2 A NE2 HIS 66 A HIS 65 1_555 I ZN ZN . A ZN 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc3 A OE1 GLU 103 A GLU 102 1_555 I ZN ZN . A ZN 308 2_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc4 A OE2 GLU 103 A GLU 102 1_555 I ZN ZN . A ZN 308 2_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc5 A NE2 HIS 107 A HIS 106 1_555 I ZN ZN . A ZN 308 2_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc6 H O1 EDO . A EDO 307 1_555 I ZN ZN . A ZN 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc7 J ZN ZN . A ZN 309 1_555 K O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc8 J ZN ZN . A ZN 309 1_555 K O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7MLP _atom_sites.fract_transf_matrix[1][1] 0.025868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010057 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012842 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZJ4 A 1 301 301 ZJ4 LIG . C 3 EDO A 1 302 401 EDO EDO . D 3 EDO A 1 303 501 EDO EDO . E 3 EDO A 1 304 701 EDO EDO . F 3 EDO A 1 305 801 EDO EDO . G 3 EDO A 1 306 901 EDO EDO . H 3 EDO A 1 307 1001 EDO EDO . I 4 ZN A 1 308 1 ZN ZN . J 4 ZN A 1 309 2 ZN ZN . K 5 HOH A 1 401 320 HOH HOH . K 5 HOH A 2 402 330 HOH HOH . K 5 HOH A 3 403 75 HOH HOH . K 5 HOH A 4 404 337 HOH HOH . K 5 HOH A 5 405 345 HOH HOH . K 5 HOH A 6 406 349 HOH HOH . K 5 HOH A 7 407 54 HOH HOH . K 5 HOH A 8 408 256 HOH HOH . K 5 HOH A 9 409 236 HOH HOH . K 5 HOH A 10 410 199 HOH HOH . K 5 HOH A 11 411 89 HOH HOH . K 5 HOH A 12 412 322 HOH HOH . K 5 HOH A 13 413 331 HOH HOH . K 5 HOH A 14 414 70 HOH HOH . K 5 HOH A 15 415 125 HOH HOH . K 5 HOH A 16 416 171 HOH HOH . K 5 HOH A 17 417 155 HOH HOH . K 5 HOH A 18 418 66 HOH HOH . K 5 HOH A 19 419 141 HOH HOH . K 5 HOH A 20 420 85 HOH HOH . K 5 HOH A 21 421 216 HOH HOH . K 5 HOH A 22 422 168 HOH HOH . K 5 HOH A 23 423 343 HOH HOH . K 5 HOH A 24 424 96 HOH HOH . K 5 HOH A 25 425 294 HOH HOH . K 5 HOH A 26 426 135 HOH HOH . K 5 HOH A 27 427 74 HOH HOH . K 5 HOH A 28 428 28 HOH HOH . K 5 HOH A 29 429 90 HOH HOH . K 5 HOH A 30 430 326 HOH HOH . K 5 HOH A 31 431 137 HOH HOH . K 5 HOH A 32 432 42 HOH HOH . K 5 HOH A 33 433 10 HOH HOH . K 5 HOH A 34 434 11 HOH HOH . K 5 HOH A 35 435 80 HOH HOH . K 5 HOH A 36 436 33 HOH HOH . K 5 HOH A 37 437 111 HOH HOH . K 5 HOH A 38 438 95 HOH HOH . K 5 HOH A 39 439 37 HOH HOH . K 5 HOH A 40 440 77 HOH HOH . K 5 HOH A 41 441 73 HOH HOH . K 5 HOH A 42 442 146 HOH HOH . K 5 HOH A 43 443 84 HOH HOH . K 5 HOH A 44 444 56 HOH HOH . K 5 HOH A 45 445 68 HOH HOH . K 5 HOH A 46 446 22 HOH HOH . K 5 HOH A 47 447 88 HOH HOH . K 5 HOH A 48 448 351 HOH HOH . K 5 HOH A 49 449 178 HOH HOH . K 5 HOH A 50 450 49 HOH HOH . K 5 HOH A 51 451 215 HOH HOH . K 5 HOH A 52 452 145 HOH HOH . K 5 HOH A 53 453 131 HOH HOH . K 5 HOH A 54 454 233 HOH HOH . K 5 HOH A 55 455 1 HOH HOH . K 5 HOH A 56 456 21 HOH HOH . K 5 HOH A 57 457 179 HOH HOH . K 5 HOH A 58 458 262 HOH HOH . K 5 HOH A 59 459 46 HOH HOH . K 5 HOH A 60 460 38 HOH HOH . K 5 HOH A 61 461 67 HOH HOH . K 5 HOH A 62 462 86 HOH HOH . K 5 HOH A 63 463 149 HOH HOH . K 5 HOH A 64 464 229 HOH HOH . K 5 HOH A 65 465 115 HOH HOH . K 5 HOH A 66 466 24 HOH HOH . K 5 HOH A 67 467 17 HOH HOH . K 5 HOH A 68 468 192 HOH HOH . K 5 HOH A 69 469 51 HOH HOH . K 5 HOH A 70 470 14 HOH HOH . K 5 HOH A 71 471 104 HOH HOH . K 5 HOH A 72 472 60 HOH HOH . K 5 HOH A 73 473 26 HOH HOH . K 5 HOH A 74 474 15 HOH HOH . K 5 HOH A 75 475 64 HOH HOH . K 5 HOH A 76 476 82 HOH HOH . K 5 HOH A 77 477 87 HOH HOH . K 5 HOH A 78 478 189 HOH HOH . K 5 HOH A 79 479 83 HOH HOH . K 5 HOH A 80 480 55 HOH HOH . K 5 HOH A 81 481 53 HOH HOH . K 5 HOH A 82 482 36 HOH HOH . K 5 HOH A 83 483 170 HOH HOH . K 5 HOH A 84 484 52 HOH HOH . K 5 HOH A 85 485 150 HOH HOH . K 5 HOH A 86 486 97 HOH HOH . K 5 HOH A 87 487 5 HOH HOH . K 5 HOH A 88 488 48 HOH HOH . K 5 HOH A 89 489 13 HOH HOH . K 5 HOH A 90 490 103 HOH HOH . K 5 HOH A 91 491 41 HOH HOH . K 5 HOH A 92 492 78 HOH HOH . K 5 HOH A 93 493 2 HOH HOH . K 5 HOH A 94 494 340 HOH HOH . K 5 HOH A 95 495 63 HOH HOH . K 5 HOH A 96 496 338 HOH HOH . K 5 HOH A 97 497 283 HOH HOH . K 5 HOH A 98 498 72 HOH HOH . K 5 HOH A 99 499 180 HOH HOH . K 5 HOH A 100 500 158 HOH HOH . K 5 HOH A 101 501 7 HOH HOH . K 5 HOH A 102 502 9 HOH HOH . K 5 HOH A 103 503 27 HOH HOH . K 5 HOH A 104 504 212 HOH HOH . K 5 HOH A 105 505 94 HOH HOH . K 5 HOH A 106 506 39 HOH HOH . K 5 HOH A 107 507 329 HOH HOH . K 5 HOH A 108 508 160 HOH HOH . K 5 HOH A 109 509 81 HOH HOH . K 5 HOH A 110 510 323 HOH HOH . K 5 HOH A 111 511 93 HOH HOH . K 5 HOH A 112 512 44 HOH HOH . K 5 HOH A 113 513 62 HOH HOH . K 5 HOH A 114 514 79 HOH HOH . K 5 HOH A 115 515 218 HOH HOH . K 5 HOH A 116 516 226 HOH HOH . K 5 HOH A 117 517 31 HOH HOH . K 5 HOH A 118 518 76 HOH HOH . K 5 HOH A 119 519 210 HOH HOH . K 5 HOH A 120 520 107 HOH HOH . K 5 HOH A 121 521 130 HOH HOH . K 5 HOH A 122 522 101 HOH HOH . K 5 HOH A 123 523 25 HOH HOH . K 5 HOH A 124 524 163 HOH HOH . K 5 HOH A 125 525 197 HOH HOH . K 5 HOH A 126 526 65 HOH HOH . K 5 HOH A 127 527 114 HOH HOH . K 5 HOH A 128 528 58 HOH HOH . K 5 HOH A 129 529 151 HOH HOH . K 5 HOH A 130 530 3 HOH HOH . K 5 HOH A 131 531 152 HOH HOH . K 5 HOH A 132 532 127 HOH HOH . K 5 HOH A 133 533 20 HOH HOH . K 5 HOH A 134 534 182 HOH HOH . K 5 HOH A 135 535 43 HOH HOH . K 5 HOH A 136 536 117 HOH HOH . K 5 HOH A 137 537 157 HOH HOH . K 5 HOH A 138 538 220 HOH HOH . K 5 HOH A 139 539 19 HOH HOH . K 5 HOH A 140 540 6 HOH HOH . K 5 HOH A 141 541 346 HOH HOH . K 5 HOH A 142 542 265 HOH HOH . K 5 HOH A 143 543 8 HOH HOH . K 5 HOH A 144 544 287 HOH HOH . K 5 HOH A 145 545 69 HOH HOH . K 5 HOH A 146 546 71 HOH HOH . K 5 HOH A 147 547 298 HOH HOH . K 5 HOH A 148 548 237 HOH HOH . K 5 HOH A 149 549 18 HOH HOH . K 5 HOH A 150 550 144 HOH HOH . K 5 HOH A 151 551 339 HOH HOH . K 5 HOH A 152 552 16 HOH HOH . K 5 HOH A 153 553 128 HOH HOH . K 5 HOH A 154 554 153 HOH HOH . K 5 HOH A 155 555 59 HOH HOH . K 5 HOH A 156 556 175 HOH HOH . K 5 HOH A 157 557 45 HOH HOH . K 5 HOH A 158 558 61 HOH HOH . K 5 HOH A 159 559 29 HOH HOH . K 5 HOH A 160 560 106 HOH HOH . K 5 HOH A 161 561 126 HOH HOH . K 5 HOH A 162 562 57 HOH HOH . K 5 HOH A 163 563 120 HOH HOH . K 5 HOH A 164 564 40 HOH HOH . K 5 HOH A 165 565 34 HOH HOH . K 5 HOH A 166 566 140 HOH HOH . K 5 HOH A 167 567 35 HOH HOH . K 5 HOH A 168 568 12 HOH HOH . K 5 HOH A 169 569 132 HOH HOH . K 5 HOH A 170 570 165 HOH HOH . K 5 HOH A 171 571 47 HOH HOH . K 5 HOH A 172 572 183 HOH HOH . K 5 HOH A 173 573 354 HOH HOH . K 5 HOH A 174 574 143 HOH HOH . K 5 HOH A 175 575 142 HOH HOH . K 5 HOH A 176 576 290 HOH HOH . K 5 HOH A 177 577 121 HOH HOH . K 5 HOH A 178 578 324 HOH HOH . K 5 HOH A 179 579 23 HOH HOH . K 5 HOH A 180 580 91 HOH HOH . K 5 HOH A 181 581 32 HOH HOH . K 5 HOH A 182 582 335 HOH HOH . K 5 HOH A 183 583 321 HOH HOH . K 5 HOH A 184 584 161 HOH HOH . K 5 HOH A 185 585 347 HOH HOH . K 5 HOH A 186 586 162 HOH HOH . K 5 HOH A 187 587 206 HOH HOH . K 5 HOH A 188 588 327 HOH HOH . K 5 HOH A 189 589 166 HOH HOH . K 5 HOH A 190 590 300 HOH HOH . K 5 HOH A 191 591 344 HOH HOH . K 5 HOH A 192 592 328 HOH HOH . K 5 HOH A 193 593 319 HOH HOH . K 5 HOH A 194 594 195 HOH HOH . K 5 HOH A 195 595 317 HOH HOH . K 5 HOH A 196 596 291 HOH HOH . K 5 HOH A 197 597 350 HOH HOH . K 5 HOH A 198 598 357 HOH HOH . K 5 HOH A 199 599 209 HOH HOH . K 5 HOH A 200 600 356 HOH HOH . K 5 HOH A 201 601 303 HOH HOH . K 5 HOH A 202 602 333 HOH HOH . K 5 HOH A 203 603 296 HOH HOH . K 5 HOH A 204 604 342 HOH HOH . K 5 HOH A 205 605 280 HOH HOH . K 5 HOH A 206 606 133 HOH HOH . K 5 HOH A 207 607 297 HOH HOH . K 5 HOH A 208 608 293 HOH HOH . K 5 HOH A 209 609 134 HOH HOH . K 5 HOH A 210 610 341 HOH HOH . K 5 HOH A 211 611 295 HOH HOH . K 5 HOH A 212 612 92 HOH HOH . K 5 HOH A 213 613 123 HOH HOH . K 5 HOH A 214 614 352 HOH HOH . K 5 HOH A 215 615 113 HOH HOH . K 5 HOH A 216 616 325 HOH HOH . K 5 HOH A 217 617 214 HOH HOH . K 5 HOH A 218 618 244 HOH HOH . K 5 HOH A 219 619 119 HOH HOH . K 5 HOH A 220 620 336 HOH HOH . K 5 HOH A 221 621 50 HOH HOH . K 5 HOH A 222 622 112 HOH HOH . K 5 HOH A 223 623 231 HOH HOH . K 5 HOH A 224 624 102 HOH HOH . K 5 HOH A 225 625 122 HOH HOH . K 5 HOH A 226 626 355 HOH HOH . K 5 HOH A 227 627 129 HOH HOH . K 5 HOH A 228 628 332 HOH HOH . K 5 HOH A 229 629 109 HOH HOH . K 5 HOH A 230 630 193 HOH HOH . K 5 HOH A 231 631 261 HOH HOH . K 5 HOH A 232 632 110 HOH HOH . K 5 HOH A 233 633 202 HOH HOH . K 5 HOH A 234 634 136 HOH HOH . K 5 HOH A 235 635 299 HOH HOH . K 5 HOH A 236 636 138 HOH HOH . K 5 HOH A 237 637 235 HOH HOH . K 5 HOH A 238 638 348 HOH HOH . K 5 HOH A 239 639 190 HOH HOH . K 5 HOH A 240 640 315 HOH HOH . K 5 HOH A 241 641 230 HOH HOH . K 5 HOH A 242 642 186 HOH HOH . K 5 HOH A 243 643 353 HOH HOH . K 5 HOH A 244 644 292 HOH HOH . K 5 HOH A 245 645 302 HOH HOH . K 5 HOH A 246 646 334 HOH HOH . K 5 HOH A 247 647 313 HOH HOH . K 5 HOH A 248 648 222 HOH HOH . K 5 HOH A 249 649 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 12.448 18.445 2.086 1 40.7 ? C1 EDO 303 A 1 HETATM 2 O O1 EDO . . . D 3 13.317 19.239 2.859 1 44.57 ? O1 EDO 303 A 1 HETATM 3 C C2 EDO . . . D 3 11.005 18.648 2.375 1 45.11 ? C2 EDO 303 A 1 HETATM 4 O O2 EDO . . . D 3 10.137 17.937 1.498 1 41.03 ? O2 EDO 303 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #