data_7MM3
#
_model_server_result.job_id            H7sVpLONlrM2od20Z6FpJQ 
_model_server_result.datetime_utc      '2024-10-09 23:27:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mm3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1208}' 
#
_entry.id    7MM3 
#
_exptl.entry_id    7MM3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7MM3 
_cell.length_a            54.882 
_cell.length_b            58.653 
_cell.length_c            59.857 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MM3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 116 A CYS 1097 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc2 A SG CYS 118 A CYS 1099 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc3 A SG CYS 164 A CYS 1145 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc4 A ND1 HIS 168 A HIS 1149 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7MM3 
_atom_sites.fract_transf_matrix[1][1]    0.018221 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017049 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016706 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1201 1201 ZN ZN . 
C 3 ZJG A 1 1202 1301 ZJG LIG . 
D 4 EDO A 1 1203 1501 EDO EDO . 
E 4 EDO A 1 1204 1601 EDO EDO . 
F 4 EDO A 1 1205 1701 EDO EDO . 
G 4 EDO A 1 1206 1801 EDO EDO . 
H 4 EDO A 1 1207 2101 EDO EDO . 
I 4 EDO A 1 1208 2201 EDO EDO . 
J 4 EDO A 1 1209 2501 EDO EDO . 
K 4 EDO A 1 1210 2701 EDO EDO . 
L 4 EDO A 1 1211 2801 EDO EDO . 
M 5 SO4 A 1 1212 1 SO4 SO4 . 
N 6 HOH A 1 1301 30 HOH HOH . 
N 6 HOH A 2 1302 92 HOH HOH . 
N 6 HOH A 3 1303 141 HOH HOH . 
N 6 HOH A 4 1304 203 HOH HOH . 
N 6 HOH A 5 1305 103 HOH HOH . 
N 6 HOH A 6 1306 97 HOH HOH . 
N 6 HOH A 7 1307 200 HOH HOH . 
N 6 HOH A 8 1308 89 HOH HOH . 
N 6 HOH A 9 1309 75 HOH HOH . 
N 6 HOH A 10 1310 143 HOH HOH . 
N 6 HOH A 11 1311 240 HOH HOH . 
N 6 HOH A 12 1312 217 HOH HOH . 
N 6 HOH A 13 1313 39 HOH HOH . 
N 6 HOH A 14 1314 122 HOH HOH . 
N 6 HOH A 15 1315 193 HOH HOH . 
N 6 HOH A 16 1316 183 HOH HOH . 
N 6 HOH A 17 1317 36 HOH HOH . 
N 6 HOH A 18 1318 56 HOH HOH . 
N 6 HOH A 19 1319 148 HOH HOH . 
N 6 HOH A 20 1320 23 HOH HOH . 
N 6 HOH A 21 1321 25 HOH HOH . 
N 6 HOH A 22 1322 105 HOH HOH . 
N 6 HOH A 23 1323 27 HOH HOH . 
N 6 HOH A 24 1324 132 HOH HOH . 
N 6 HOH A 25 1325 13 HOH HOH . 
N 6 HOH A 26 1326 237 HOH HOH . 
N 6 HOH A 27 1327 26 HOH HOH . 
N 6 HOH A 28 1328 156 HOH HOH . 
N 6 HOH A 29 1329 116 HOH HOH . 
N 6 HOH A 30 1330 2 HOH HOH . 
N 6 HOH A 31 1331 232 HOH HOH . 
N 6 HOH A 32 1332 128 HOH HOH . 
N 6 HOH A 33 1333 136 HOH HOH . 
N 6 HOH A 34 1334 85 HOH HOH . 
N 6 HOH A 35 1335 57 HOH HOH . 
N 6 HOH A 36 1336 18 HOH HOH . 
N 6 HOH A 37 1337 74 HOH HOH . 
N 6 HOH A 38 1338 99 HOH HOH . 
N 6 HOH A 39 1339 111 HOH HOH . 
N 6 HOH A 40 1340 15 HOH HOH . 
N 6 HOH A 41 1341 29 HOH HOH . 
N 6 HOH A 42 1342 44 HOH HOH . 
N 6 HOH A 43 1343 90 HOH HOH . 
N 6 HOH A 44 1344 199 HOH HOH . 
N 6 HOH A 45 1345 1 HOH HOH . 
N 6 HOH A 46 1346 62 HOH HOH . 
N 6 HOH A 47 1347 66 HOH HOH . 
N 6 HOH A 48 1348 37 HOH HOH . 
N 6 HOH A 49 1349 35 HOH HOH . 
N 6 HOH A 50 1350 172 HOH HOH . 
N 6 HOH A 51 1351 14 HOH HOH . 
N 6 HOH A 52 1352 11 HOH HOH . 
N 6 HOH A 53 1353 69 HOH HOH . 
N 6 HOH A 54 1354 243 HOH HOH . 
N 6 HOH A 55 1355 100 HOH HOH . 
N 6 HOH A 56 1356 4 HOH HOH . 
N 6 HOH A 57 1357 45 HOH HOH . 
N 6 HOH A 58 1358 55 HOH HOH . 
N 6 HOH A 59 1359 114 HOH HOH . 
N 6 HOH A 60 1360 19 HOH HOH . 
N 6 HOH A 61 1361 106 HOH HOH . 
N 6 HOH A 62 1362 184 HOH HOH . 
N 6 HOH A 63 1363 120 HOH HOH . 
N 6 HOH A 64 1364 5 HOH HOH . 
N 6 HOH A 65 1365 46 HOH HOH . 
N 6 HOH A 66 1366 34 HOH HOH . 
N 6 HOH A 67 1367 32 HOH HOH . 
N 6 HOH A 68 1368 61 HOH HOH . 
N 6 HOH A 69 1369 164 HOH HOH . 
N 6 HOH A 70 1370 78 HOH HOH . 
N 6 HOH A 71 1371 17 HOH HOH . 
N 6 HOH A 72 1372 70 HOH HOH . 
N 6 HOH A 73 1373 126 HOH HOH . 
N 6 HOH A 74 1374 47 HOH HOH . 
N 6 HOH A 75 1375 60 HOH HOH . 
N 6 HOH A 76 1376 119 HOH HOH . 
N 6 HOH A 77 1377 77 HOH HOH . 
N 6 HOH A 78 1378 59 HOH HOH . 
N 6 HOH A 79 1379 10 HOH HOH . 
N 6 HOH A 80 1380 8 HOH HOH . 
N 6 HOH A 81 1381 139 HOH HOH . 
N 6 HOH A 82 1382 163 HOH HOH . 
N 6 HOH A 83 1383 65 HOH HOH . 
N 6 HOH A 84 1384 21 HOH HOH . 
N 6 HOH A 85 1385 83 HOH HOH . 
N 6 HOH A 86 1386 150 HOH HOH . 
N 6 HOH A 87 1387 7 HOH HOH . 
N 6 HOH A 88 1388 40 HOH HOH . 
N 6 HOH A 89 1389 101 HOH HOH . 
N 6 HOH A 90 1390 71 HOH HOH . 
N 6 HOH A 91 1391 88 HOH HOH . 
N 6 HOH A 92 1392 72 HOH HOH . 
N 6 HOH A 93 1393 22 HOH HOH . 
N 6 HOH A 94 1394 49 HOH HOH . 
N 6 HOH A 95 1395 91 HOH HOH . 
N 6 HOH A 96 1396 54 HOH HOH . 
N 6 HOH A 97 1397 6 HOH HOH . 
N 6 HOH A 98 1398 113 HOH HOH . 
N 6 HOH A 99 1399 28 HOH HOH . 
N 6 HOH A 100 1400 33 HOH HOH . 
N 6 HOH A 101 1401 50 HOH HOH . 
N 6 HOH A 102 1402 24 HOH HOH . 
N 6 HOH A 103 1403 12 HOH HOH . 
N 6 HOH A 104 1404 41 HOH HOH . 
N 6 HOH A 105 1405 53 HOH HOH . 
N 6 HOH A 106 1406 16 HOH HOH . 
N 6 HOH A 107 1407 48 HOH HOH . 
N 6 HOH A 108 1408 64 HOH HOH . 
N 6 HOH A 109 1409 3 HOH HOH . 
N 6 HOH A 110 1410 81 HOH HOH . 
N 6 HOH A 111 1411 196 HOH HOH . 
N 6 HOH A 112 1412 38 HOH HOH . 
N 6 HOH A 113 1413 151 HOH HOH . 
N 6 HOH A 114 1414 9 HOH HOH . 
N 6 HOH A 115 1415 110 HOH HOH . 
N 6 HOH A 116 1416 168 HOH HOH . 
N 6 HOH A 117 1417 216 HOH HOH . 
N 6 HOH A 118 1418 82 HOH HOH . 
N 6 HOH A 119 1419 206 HOH HOH . 
N 6 HOH A 120 1420 159 HOH HOH . 
N 6 HOH A 121 1421 94 HOH HOH . 
N 6 HOH A 122 1422 121 HOH HOH . 
N 6 HOH A 123 1423 137 HOH HOH . 
N 6 HOH A 124 1424 20 HOH HOH . 
N 6 HOH A 125 1425 42 HOH HOH . 
N 6 HOH A 126 1426 84 HOH HOH . 
N 6 HOH A 127 1427 248 HOH HOH . 
N 6 HOH A 128 1428 245 HOH HOH . 
N 6 HOH A 129 1429 107 HOH HOH . 
N 6 HOH A 130 1430 225 HOH HOH . 
N 6 HOH A 131 1431 175 HOH HOH . 
N 6 HOH A 132 1432 223 HOH HOH . 
N 6 HOH A 133 1433 162 HOH HOH . 
N 6 HOH A 134 1434 130 HOH HOH . 
N 6 HOH A 135 1435 51 HOH HOH . 
N 6 HOH A 136 1436 63 HOH HOH . 
N 6 HOH A 137 1437 221 HOH HOH . 
N 6 HOH A 138 1438 58 HOH HOH . 
N 6 HOH A 139 1439 192 HOH HOH . 
N 6 HOH A 140 1440 117 HOH HOH . 
N 6 HOH A 141 1441 202 HOH HOH . 
N 6 HOH A 142 1442 109 HOH HOH . 
N 6 HOH A 143 1443 241 HOH HOH . 
N 6 HOH A 144 1444 86 HOH HOH . 
N 6 HOH A 145 1445 155 HOH HOH . 
N 6 HOH A 146 1446 247 HOH HOH . 
N 6 HOH A 147 1447 242 HOH HOH . 
N 6 HOH A 148 1448 238 HOH HOH . 
N 6 HOH A 149 1449 87 HOH HOH . 
N 6 HOH A 150 1450 180 HOH HOH . 
N 6 HOH A 151 1451 224 HOH HOH . 
N 6 HOH A 152 1452 102 HOH HOH . 
N 6 HOH A 153 1453 174 HOH HOH . 
N 6 HOH A 154 1454 194 HOH HOH . 
N 6 HOH A 155 1455 95 HOH HOH . 
N 6 HOH A 156 1456 222 HOH HOH . 
N 6 HOH A 157 1457 93 HOH HOH . 
N 6 HOH A 158 1458 218 HOH HOH . 
N 6 HOH A 159 1459 104 HOH HOH . 
N 6 HOH A 160 1460 246 HOH HOH . 
N 6 HOH A 161 1461 133 HOH HOH . 
N 6 HOH A 162 1462 209 HOH HOH . 
N 6 HOH A 163 1463 153 HOH HOH . 
N 6 HOH A 164 1464 52 HOH HOH . 
N 6 HOH A 165 1465 189 HOH HOH . 
N 6 HOH A 166 1466 173 HOH HOH . 
N 6 HOH A 167 1467 76 HOH HOH . 
N 6 HOH A 168 1468 226 HOH HOH . 
N 6 HOH A 169 1469 118 HOH HOH . 
N 6 HOH A 170 1470 158 HOH HOH . 
N 6 HOH A 171 1471 129 HOH HOH . 
N 6 HOH A 172 1472 188 HOH HOH . 
N 6 HOH A 173 1473 73 HOH HOH . 
N 6 HOH A 174 1474 124 HOH HOH . 
N 6 HOH A 175 1475 244 HOH HOH . 
N 6 HOH A 176 1476 31 HOH HOH . 
N 6 HOH A 177 1477 79 HOH HOH . 
N 6 HOH A 178 1478 176 HOH HOH . 
N 6 HOH A 179 1479 149 HOH HOH . 
N 6 HOH A 180 1480 197 HOH HOH . 
N 6 HOH A 181 1481 157 HOH HOH . 
N 6 HOH A 182 1482 233 HOH HOH . 
N 6 HOH A 183 1483 131 HOH HOH . 
N 6 HOH A 184 1484 152 HOH HOH . 
N 6 HOH A 185 1485 123 HOH HOH . 
N 6 HOH A 186 1486 68 HOH HOH . 
N 6 HOH A 187 1487 187 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 4 -3.706 -33.079 17.13 1 24.25 ? C1 EDO 1208 A 1 
HETATM 2 O O1 EDO . . . I 4 -3.399 -33.153 15.715 1 26.04 ? O1 EDO 1208 A 1 
HETATM 3 C C2 EDO . . . I 4 -4.552 -34.254 17.552 1 23.47 ? C2 EDO 1208 A 1 
HETATM 4 O O2 EDO . . . I 4 -3.838 -35.431 17.138 1 29.02 ? O2 EDO 1208 A 1 
HETATM 5 H H11 EDO . . . I 4 -2.778 -33.072 17.706 1 29.14 ? H11 EDO 1208 A 1 
HETATM 6 H H12 EDO . . . I 4 -4.239 -32.15 17.341 1 29.14 ? H12 EDO 1208 A 1 
HETATM 7 H HO1 EDO . . . I 4 -2.44 -33.18 15.594 1 31.28 ? HO1 EDO 1208 A 1 
HETATM 8 H H21 EDO . . . I 4 -4.701 -34.254 18.633 1 28.2 ? H21 EDO 1208 A 1 
HETATM 9 H H22 EDO . . . I 4 -5.535 -34.212 17.077 1 28.2 ? H22 EDO 1208 A 1 
HETATM 10 H HO2 EDO . . . I 4 -4.111 -36.182 17.683 1 34.86 ? HO2 EDO 1208 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           10 
#