data_7MM6
#
_model_server_result.job_id            G5fVxEZrKb3SK8MhKBSQ9w 
_model_server_result.datetime_utc      '2024-12-19 03:46:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mm6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1203}' 
#
_entry.id    7MM6 
#
_exptl.entry_id    7MM6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7MM6 
_cell.length_a            54.613 
_cell.length_b            58.646 
_cell.length_c            59.648 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MM6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 116 A CYS 1097 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc2 A SG CYS 118 A CYS 1099 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc3 A SG CYS 164 A CYS 1145 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc4 A ND1 HIS 168 A HIS 1149 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7MM6 
_atom_sites.fract_transf_matrix[1][1]    0.018311 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017051 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016765 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1201 1201 ZN ZN . 
C 3 ZJY A 1 1202 1301 ZJY LIG . 
D 4 EDO A 1 1203 1401 EDO EDO . 
E 4 EDO A 1 1204 1501 EDO EDO . 
F 4 EDO A 1 1205 1601 EDO EDO . 
G 4 EDO A 1 1206 1701 EDO EDO . 
H 4 EDO A 1 1207 1801 EDO EDO . 
I 4 EDO A 1 1208 1901 EDO EDO . 
J 5 SO4 A 1 1209 1 SO4 SO4 . 
K 6 HOH A 1 1301 22 HOH HOH . 
K 6 HOH A 2 1302 124 HOH HOH . 
K 6 HOH A 3 1303 101 HOH HOH . 
K 6 HOH A 4 1304 154 HOH HOH . 
K 6 HOH A 5 1305 44 HOH HOH . 
K 6 HOH A 6 1306 30 HOH HOH . 
K 6 HOH A 7 1307 20 HOH HOH . 
K 6 HOH A 8 1308 25 HOH HOH . 
K 6 HOH A 9 1309 57 HOH HOH . 
K 6 HOH A 10 1310 55 HOH HOH . 
K 6 HOH A 11 1311 28 HOH HOH . 
K 6 HOH A 12 1312 8 HOH HOH . 
K 6 HOH A 13 1313 3 HOH HOH . 
K 6 HOH A 14 1314 51 HOH HOH . 
K 6 HOH A 15 1315 17 HOH HOH . 
K 6 HOH A 16 1316 103 HOH HOH . 
K 6 HOH A 17 1317 39 HOH HOH . 
K 6 HOH A 18 1318 100 HOH HOH . 
K 6 HOH A 19 1319 61 HOH HOH . 
K 6 HOH A 20 1320 99 HOH HOH . 
K 6 HOH A 21 1321 38 HOH HOH . 
K 6 HOH A 22 1322 50 HOH HOH . 
K 6 HOH A 23 1323 6 HOH HOH . 
K 6 HOH A 24 1324 93 HOH HOH . 
K 6 HOH A 25 1325 7 HOH HOH . 
K 6 HOH A 26 1326 127 HOH HOH . 
K 6 HOH A 27 1327 90 HOH HOH . 
K 6 HOH A 28 1328 19 HOH HOH . 
K 6 HOH A 29 1329 23 HOH HOH . 
K 6 HOH A 30 1330 9 HOH HOH . 
K 6 HOH A 31 1331 136 HOH HOH . 
K 6 HOH A 32 1332 74 HOH HOH . 
K 6 HOH A 33 1333 80 HOH HOH . 
K 6 HOH A 34 1334 147 HOH HOH . 
K 6 HOH A 35 1335 15 HOH HOH . 
K 6 HOH A 36 1336 107 HOH HOH . 
K 6 HOH A 37 1337 27 HOH HOH . 
K 6 HOH A 38 1338 133 HOH HOH . 
K 6 HOH A 39 1339 12 HOH HOH . 
K 6 HOH A 40 1340 47 HOH HOH . 
K 6 HOH A 41 1341 73 HOH HOH . 
K 6 HOH A 42 1342 37 HOH HOH . 
K 6 HOH A 43 1343 65 HOH HOH . 
K 6 HOH A 44 1344 84 HOH HOH . 
K 6 HOH A 45 1345 59 HOH HOH . 
K 6 HOH A 46 1346 1 HOH HOH . 
K 6 HOH A 47 1347 31 HOH HOH . 
K 6 HOH A 48 1348 58 HOH HOH . 
K 6 HOH A 49 1349 149 HOH HOH . 
K 6 HOH A 50 1350 114 HOH HOH . 
K 6 HOH A 51 1351 33 HOH HOH . 
K 6 HOH A 52 1352 158 HOH HOH . 
K 6 HOH A 53 1353 5 HOH HOH . 
K 6 HOH A 54 1354 86 HOH HOH . 
K 6 HOH A 55 1355 81 HOH HOH . 
K 6 HOH A 56 1356 134 HOH HOH . 
K 6 HOH A 57 1357 60 HOH HOH . 
K 6 HOH A 58 1358 2 HOH HOH . 
K 6 HOH A 59 1359 14 HOH HOH . 
K 6 HOH A 60 1360 18 HOH HOH . 
K 6 HOH A 61 1361 21 HOH HOH . 
K 6 HOH A 62 1362 129 HOH HOH . 
K 6 HOH A 63 1363 4 HOH HOH . 
K 6 HOH A 64 1364 32 HOH HOH . 
K 6 HOH A 65 1365 98 HOH HOH . 
K 6 HOH A 66 1366 87 HOH HOH . 
K 6 HOH A 67 1367 70 HOH HOH . 
K 6 HOH A 68 1368 96 HOH HOH . 
K 6 HOH A 69 1369 41 HOH HOH . 
K 6 HOH A 70 1370 54 HOH HOH . 
K 6 HOH A 71 1371 104 HOH HOH . 
K 6 HOH A 72 1372 111 HOH HOH . 
K 6 HOH A 73 1373 26 HOH HOH . 
K 6 HOH A 74 1374 11 HOH HOH . 
K 6 HOH A 75 1375 123 HOH HOH . 
K 6 HOH A 76 1376 52 HOH HOH . 
K 6 HOH A 77 1377 110 HOH HOH . 
K 6 HOH A 78 1378 40 HOH HOH . 
K 6 HOH A 79 1379 78 HOH HOH . 
K 6 HOH A 80 1380 45 HOH HOH . 
K 6 HOH A 81 1381 29 HOH HOH . 
K 6 HOH A 82 1382 34 HOH HOH . 
K 6 HOH A 83 1383 89 HOH HOH . 
K 6 HOH A 84 1384 77 HOH HOH . 
K 6 HOH A 85 1385 46 HOH HOH . 
K 6 HOH A 86 1386 143 HOH HOH . 
K 6 HOH A 87 1387 131 HOH HOH . 
K 6 HOH A 88 1388 48 HOH HOH . 
K 6 HOH A 89 1389 13 HOH HOH . 
K 6 HOH A 90 1390 157 HOH HOH . 
K 6 HOH A 91 1391 64 HOH HOH . 
K 6 HOH A 92 1392 88 HOH HOH . 
K 6 HOH A 93 1393 69 HOH HOH . 
K 6 HOH A 94 1394 10 HOH HOH . 
K 6 HOH A 95 1395 53 HOH HOH . 
K 6 HOH A 96 1396 160 HOH HOH . 
K 6 HOH A 97 1397 109 HOH HOH . 
K 6 HOH A 98 1398 75 HOH HOH . 
K 6 HOH A 99 1399 16 HOH HOH . 
K 6 HOH A 100 1400 49 HOH HOH . 
K 6 HOH A 101 1401 43 HOH HOH . 
K 6 HOH A 102 1402 42 HOH HOH . 
K 6 HOH A 103 1403 112 HOH HOH . 
K 6 HOH A 104 1404 71 HOH HOH . 
K 6 HOH A 105 1405 106 HOH HOH . 
K 6 HOH A 106 1406 139 HOH HOH . 
K 6 HOH A 107 1407 72 HOH HOH . 
K 6 HOH A 108 1408 68 HOH HOH . 
K 6 HOH A 109 1409 118 HOH HOH . 
K 6 HOH A 110 1410 116 HOH HOH . 
K 6 HOH A 111 1411 130 HOH HOH . 
K 6 HOH A 112 1412 24 HOH HOH . 
K 6 HOH A 113 1413 92 HOH HOH . 
K 6 HOH A 114 1414 67 HOH HOH . 
K 6 HOH A 115 1415 36 HOH HOH . 
K 6 HOH A 116 1416 91 HOH HOH . 
K 6 HOH A 117 1417 132 HOH HOH . 
K 6 HOH A 118 1418 122 HOH HOH . 
K 6 HOH A 119 1419 156 HOH HOH . 
K 6 HOH A 120 1420 79 HOH HOH . 
K 6 HOH A 121 1421 97 HOH HOH . 
K 6 HOH A 122 1422 63 HOH HOH . 
K 6 HOH A 123 1423 82 HOH HOH . 
K 6 HOH A 124 1424 155 HOH HOH . 
K 6 HOH A 125 1425 121 HOH HOH . 
K 6 HOH A 126 1426 152 HOH HOH . 
K 6 HOH A 127 1427 141 HOH HOH . 
K 6 HOH A 128 1428 95 HOH HOH . 
K 6 HOH A 129 1429 108 HOH HOH . 
K 6 HOH A 130 1430 159 HOH HOH . 
K 6 HOH A 131 1431 105 HOH HOH . 
K 6 HOH A 132 1432 56 HOH HOH . 
K 6 HOH A 133 1433 83 HOH HOH . 
K 6 HOH A 134 1434 120 HOH HOH . 
K 6 HOH A 135 1435 151 HOH HOH . 
K 6 HOH A 136 1436 140 HOH HOH . 
K 6 HOH A 137 1437 76 HOH HOH . 
K 6 HOH A 138 1438 35 HOH HOH . 
K 6 HOH A 139 1439 145 HOH HOH . 
K 6 HOH A 140 1440 85 HOH HOH . 
K 6 HOH A 141 1441 137 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 -13.219 -10.854 4.857 1 21.79 ? C1 EDO 1203 A 1 
HETATM 2 O O1 EDO . . . D 4 -13.242 -10.867 6.287 1 28.39 ? O1 EDO 1203 A 1 
HETATM 3 C C2 EDO . . . D 4 -14.527 -11.445 4.355 1 32.06 ? C2 EDO 1203 A 1 
HETATM 4 O O2 EDO . . . D 4 -14.636 -12.783 4.846 1 28.5 ? O2 EDO 1203 A 1 
HETATM 5 H H11 EDO . . . D 4 -13.102 -9.832 4.491 1 26.31 ? H11 EDO 1203 A 1 
HETATM 6 H H12 EDO . . . D 4 -12.375 -11.441 4.488 1 26.31 ? H12 EDO 1203 A 1 
HETATM 7 H HO1 EDO . . . D 4 -12.869 -10.04 6.623 1 34.24 ? HO1 EDO 1203 A 1 
HETATM 8 H H21 EDO . . . D 4 -15.369 -10.845 4.707 1 38.64 ? H21 EDO 1203 A 1 
HETATM 9 H H22 EDO . . . D 4 -14.546 -11.442 3.263 1 38.64 ? H22 EDO 1203 A 1 
HETATM 10 H HO2 EDO . . . D 4 -15.037 -13.343 4.168 1 34.36 ? HO2 EDO 1203 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           10 
#