data_7MME # _model_server_result.job_id RubUCyT3D4yFRH-Fw2uLIg _model_server_result.datetime_utc '2024-12-04 09:48:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mme # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1204}' # _entry.id 7MME # _exptl.entry_id 7MME _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MME _cell.length_a 55.616 _cell.length_b 58.511 _cell.length_c 59.938 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MME _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 116 A CYS 1097 1_555 C ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 A SG CYS 118 A CYS 1099 1_555 C ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc3 A SG CYS 164 A CYS 1145 1_555 C ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc4 A ND1 HIS 168 A HIS 1149 1_555 C ZN ZN . A ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 191 n n C1 C2 EDO sing 192 n n C1 H11 EDO sing 193 n n C1 H12 EDO sing 194 n n O1 HO1 EDO sing 195 n n C2 O2 EDO sing 196 n n C2 H21 EDO sing 197 n n C2 H22 EDO sing 198 n n O2 HO2 EDO sing 199 n n # _atom_sites.entry_id 7MME _atom_sites.fract_transf_matrix[1][1] 0.01798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017091 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9H4 A 1 1201 1201 9H4 LIG . C 3 ZN A 1 1202 1301 ZN ZN . D 4 EDO A 1 1203 1501 EDO EDO . E 4 EDO A 1 1204 1701 EDO EDO . F 4 EDO A 1 1205 1801 EDO EDO . G 4 EDO A 1 1206 1901 EDO EDO . H 5 GOL A 1 1207 2001 GOL GOL . I 5 GOL A 1 1208 2101 GOL GOL . J 6 SO4 A 1 1209 1 SO4 SO4 . K 6 SO4 A 1 1210 2 SO4 SO4 . L 7 HOH A 1 1301 126 HOH HOH . L 7 HOH A 2 1302 182 HOH HOH . L 7 HOH A 3 1303 181 HOH HOH . L 7 HOH A 4 1304 115 HOH HOH . L 7 HOH A 5 1305 30 HOH HOH . L 7 HOH A 6 1306 49 HOH HOH . L 7 HOH A 7 1307 160 HOH HOH . L 7 HOH A 8 1308 93 HOH HOH . L 7 HOH A 9 1309 223 HOH HOH . L 7 HOH A 10 1310 209 HOH HOH . L 7 HOH A 11 1311 122 HOH HOH . L 7 HOH A 12 1312 113 HOH HOH . L 7 HOH A 13 1313 235 HOH HOH . L 7 HOH A 14 1314 231 HOH HOH . L 7 HOH A 15 1315 37 HOH HOH . L 7 HOH A 16 1316 81 HOH HOH . L 7 HOH A 17 1317 131 HOH HOH . L 7 HOH A 18 1318 155 HOH HOH . L 7 HOH A 19 1319 183 HOH HOH . L 7 HOH A 20 1320 90 HOH HOH . L 7 HOH A 21 1321 94 HOH HOH . L 7 HOH A 22 1322 212 HOH HOH . L 7 HOH A 23 1323 87 HOH HOH . L 7 HOH A 24 1324 232 HOH HOH . L 7 HOH A 25 1325 15 HOH HOH . L 7 HOH A 26 1326 66 HOH HOH . L 7 HOH A 27 1327 159 HOH HOH . L 7 HOH A 28 1328 3 HOH HOH . L 7 HOH A 29 1329 101 HOH HOH . L 7 HOH A 30 1330 106 HOH HOH . L 7 HOH A 31 1331 176 HOH HOH . L 7 HOH A 32 1332 17 HOH HOH . L 7 HOH A 33 1333 11 HOH HOH . L 7 HOH A 34 1334 35 HOH HOH . L 7 HOH A 35 1335 58 HOH HOH . L 7 HOH A 36 1336 158 HOH HOH . L 7 HOH A 37 1337 62 HOH HOH . L 7 HOH A 38 1338 157 HOH HOH . L 7 HOH A 39 1339 196 HOH HOH . L 7 HOH A 40 1340 22 HOH HOH . L 7 HOH A 41 1341 19 HOH HOH . L 7 HOH A 42 1342 45 HOH HOH . L 7 HOH A 43 1343 136 HOH HOH . L 7 HOH A 44 1344 100 HOH HOH . L 7 HOH A 45 1345 88 HOH HOH . L 7 HOH A 46 1346 193 HOH HOH . L 7 HOH A 47 1347 152 HOH HOH . L 7 HOH A 48 1348 213 HOH HOH . L 7 HOH A 49 1349 31 HOH HOH . L 7 HOH A 50 1350 112 HOH HOH . L 7 HOH A 51 1351 192 HOH HOH . L 7 HOH A 52 1352 224 HOH HOH . L 7 HOH A 53 1353 103 HOH HOH . L 7 HOH A 54 1354 29 HOH HOH . L 7 HOH A 55 1355 104 HOH HOH . L 7 HOH A 56 1356 141 HOH HOH . L 7 HOH A 57 1357 4 HOH HOH . L 7 HOH A 58 1358 25 HOH HOH . L 7 HOH A 59 1359 128 HOH HOH . L 7 HOH A 60 1360 10 HOH HOH . L 7 HOH A 61 1361 150 HOH HOH . L 7 HOH A 62 1362 129 HOH HOH . L 7 HOH A 63 1363 43 HOH HOH . L 7 HOH A 64 1364 73 HOH HOH . L 7 HOH A 65 1365 27 HOH HOH . L 7 HOH A 66 1366 67 HOH HOH . L 7 HOH A 67 1367 16 HOH HOH . L 7 HOH A 68 1368 108 HOH HOH . L 7 HOH A 69 1369 119 HOH HOH . L 7 HOH A 70 1370 121 HOH HOH . L 7 HOH A 71 1371 68 HOH HOH . L 7 HOH A 72 1372 8 HOH HOH . L 7 HOH A 73 1373 52 HOH HOH . L 7 HOH A 74 1374 84 HOH HOH . L 7 HOH A 75 1375 1 HOH HOH . L 7 HOH A 76 1376 206 HOH HOH . L 7 HOH A 77 1377 28 HOH HOH . L 7 HOH A 78 1378 23 HOH HOH . L 7 HOH A 79 1379 26 HOH HOH . L 7 HOH A 80 1380 12 HOH HOH . L 7 HOH A 81 1381 21 HOH HOH . L 7 HOH A 82 1382 142 HOH HOH . L 7 HOH A 83 1383 137 HOH HOH . L 7 HOH A 84 1384 139 HOH HOH . L 7 HOH A 85 1385 38 HOH HOH . L 7 HOH A 86 1386 123 HOH HOH . L 7 HOH A 87 1387 41 HOH HOH . L 7 HOH A 88 1388 6 HOH HOH . L 7 HOH A 89 1389 96 HOH HOH . L 7 HOH A 90 1390 40 HOH HOH . L 7 HOH A 91 1391 178 HOH HOH . L 7 HOH A 92 1392 64 HOH HOH . L 7 HOH A 93 1393 33 HOH HOH . L 7 HOH A 94 1394 14 HOH HOH . L 7 HOH A 95 1395 147 HOH HOH . L 7 HOH A 96 1396 2 HOH HOH . L 7 HOH A 97 1397 18 HOH HOH . L 7 HOH A 98 1398 117 HOH HOH . L 7 HOH A 99 1399 9 HOH HOH . L 7 HOH A 100 1400 83 HOH HOH . L 7 HOH A 101 1401 205 HOH HOH . L 7 HOH A 102 1402 161 HOH HOH . L 7 HOH A 103 1403 69 HOH HOH . L 7 HOH A 104 1404 47 HOH HOH . L 7 HOH A 105 1405 46 HOH HOH . L 7 HOH A 106 1406 74 HOH HOH . L 7 HOH A 107 1407 218 HOH HOH . L 7 HOH A 108 1408 172 HOH HOH . L 7 HOH A 109 1409 60 HOH HOH . L 7 HOH A 110 1410 13 HOH HOH . L 7 HOH A 111 1411 51 HOH HOH . L 7 HOH A 112 1412 57 HOH HOH . L 7 HOH A 113 1413 153 HOH HOH . L 7 HOH A 114 1414 82 HOH HOH . L 7 HOH A 115 1415 5 HOH HOH . L 7 HOH A 116 1416 76 HOH HOH . L 7 HOH A 117 1417 20 HOH HOH . L 7 HOH A 118 1418 217 HOH HOH . L 7 HOH A 119 1419 34 HOH HOH . L 7 HOH A 120 1420 61 HOH HOH . L 7 HOH A 121 1421 50 HOH HOH . L 7 HOH A 122 1422 116 HOH HOH . L 7 HOH A 123 1423 63 HOH HOH . L 7 HOH A 124 1424 56 HOH HOH . L 7 HOH A 125 1425 7 HOH HOH . L 7 HOH A 126 1426 130 HOH HOH . L 7 HOH A 127 1427 151 HOH HOH . L 7 HOH A 128 1428 36 HOH HOH . L 7 HOH A 129 1429 175 HOH HOH . L 7 HOH A 130 1430 197 HOH HOH . L 7 HOH A 131 1431 24 HOH HOH . L 7 HOH A 132 1432 220 HOH HOH . L 7 HOH A 133 1433 53 HOH HOH . L 7 HOH A 134 1434 72 HOH HOH . L 7 HOH A 135 1435 219 HOH HOH . L 7 HOH A 136 1436 65 HOH HOH . L 7 HOH A 137 1437 78 HOH HOH . L 7 HOH A 138 1438 48 HOH HOH . L 7 HOH A 139 1439 102 HOH HOH . L 7 HOH A 140 1440 222 HOH HOH . L 7 HOH A 141 1441 120 HOH HOH . L 7 HOH A 142 1442 85 HOH HOH . L 7 HOH A 143 1443 233 HOH HOH . L 7 HOH A 144 1444 98 HOH HOH . L 7 HOH A 145 1445 99 HOH HOH . L 7 HOH A 146 1446 80 HOH HOH . L 7 HOH A 147 1447 168 HOH HOH . L 7 HOH A 148 1448 199 HOH HOH . L 7 HOH A 149 1449 215 HOH HOH . L 7 HOH A 150 1450 226 HOH HOH . L 7 HOH A 151 1451 202 HOH HOH . L 7 HOH A 152 1452 39 HOH HOH . L 7 HOH A 153 1453 166 HOH HOH . L 7 HOH A 154 1454 42 HOH HOH . L 7 HOH A 155 1455 145 HOH HOH . L 7 HOH A 156 1456 229 HOH HOH . L 7 HOH A 157 1457 95 HOH HOH . L 7 HOH A 158 1458 211 HOH HOH . L 7 HOH A 159 1459 79 HOH HOH . L 7 HOH A 160 1460 156 HOH HOH . L 7 HOH A 161 1461 110 HOH HOH . L 7 HOH A 162 1462 143 HOH HOH . L 7 HOH A 163 1463 59 HOH HOH . L 7 HOH A 164 1464 195 HOH HOH . L 7 HOH A 165 1465 227 HOH HOH . L 7 HOH A 166 1466 177 HOH HOH . L 7 HOH A 167 1467 171 HOH HOH . L 7 HOH A 168 1468 179 HOH HOH . L 7 HOH A 169 1469 228 HOH HOH . L 7 HOH A 170 1470 186 HOH HOH . L 7 HOH A 171 1471 185 HOH HOH . L 7 HOH A 172 1472 198 HOH HOH . L 7 HOH A 173 1473 210 HOH HOH . L 7 HOH A 174 1474 191 HOH HOH . L 7 HOH A 175 1475 221 HOH HOH . L 7 HOH A 176 1476 190 HOH HOH . L 7 HOH A 177 1477 97 HOH HOH . L 7 HOH A 178 1478 230 HOH HOH . L 7 HOH A 179 1479 170 HOH HOH . L 7 HOH A 180 1480 154 HOH HOH . L 7 HOH A 181 1481 133 HOH HOH . L 7 HOH A 182 1482 140 HOH HOH . L 7 HOH A 183 1483 91 HOH HOH . L 7 HOH A 184 1484 204 HOH HOH . L 7 HOH A 185 1485 44 HOH HOH . L 7 HOH A 186 1486 125 HOH HOH . L 7 HOH A 187 1487 109 HOH HOH . L 7 HOH A 188 1488 114 HOH HOH . L 7 HOH A 189 1489 75 HOH HOH . L 7 HOH A 190 1490 127 HOH HOH . L 7 HOH A 191 1491 163 HOH HOH . L 7 HOH A 192 1492 32 HOH HOH . L 7 HOH A 193 1493 189 HOH HOH . L 7 HOH A 194 1494 225 HOH HOH . L 7 HOH A 195 1495 174 HOH HOH . L 7 HOH A 196 1496 144 HOH HOH . L 7 HOH A 197 1497 77 HOH HOH . L 7 HOH A 198 1498 188 HOH HOH . L 7 HOH A 199 1499 92 HOH HOH . L 7 HOH A 200 1500 135 HOH HOH . L 7 HOH A 201 1501 201 HOH HOH . L 7 HOH A 202 1502 105 HOH HOH . L 7 HOH A 203 1503 236 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 4 9.981 -6.692 38.624 1 27.48 ? C1 EDO 1204 A 1 HETATM 2 O O1 EDO . . . E 4 9.269 -5.451 38.551 1 32.04 ? O1 EDO 1204 A 1 HETATM 3 C C2 EDO . . . E 4 9.156 -7.679 39.438 1 26.95 ? C2 EDO 1204 A 1 HETATM 4 O O2 EDO . . . E 4 7.89 -7.088 39.772 1 35.1 ? O2 EDO 1204 A 1 HETATM 5 H H11 EDO . . . E 4 10.954 -6.539 39.095 1 33.01 ? H11 EDO 1204 A 1 HETATM 6 H H12 EDO . . . E 4 10.152 -7.085 37.619 1 33.01 ? H12 EDO 1204 A 1 HETATM 7 H HO1 EDO . . . E 4 9.651 -4.901 37.854 1 38.49 ? HO1 EDO 1204 A 1 HETATM 8 H H21 EDO . . . E 4 8.997 -8.594 38.862 1 32.37 ? H21 EDO 1204 A 1 HETATM 9 H H22 EDO . . . E 4 9.692 -7.947 40.351 1 32.37 ? H22 EDO 1204 A 1 HETATM 10 H HO2 EDO . . . E 4 7.266 -7.782 40.024 1 42.16 ? HO2 EDO 1204 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 10 #