data_7MNB # _model_server_result.job_id Fnxx1M7cvJwqXFYRgyjmmQ _model_server_result.datetime_utc '2024-11-14 23:29:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mnb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 7MNB # _exptl.entry_id 7MNB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7MNB _cell.length_a 88.82 _cell.length_b 88.82 _cell.length_c 106.007 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MNB _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7MNB _atom_sites.fract_transf_matrix[1][1] 0.011259 _atom_sites.fract_transf_matrix[1][2] 0.0065 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009433 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OTA A 1 401 402 OTA OTA . C 3 CL A 1 402 1 CL CL . D 4 GOL A 1 403 1 GOL GOL . E 4 GOL A 1 404 2 GOL GOL . F 4 GOL A 1 405 3 GOL GOL . G 4 GOL A 1 406 4 GOL GOL . H 5 HOH A 1 501 99 HOH HOH . H 5 HOH A 2 502 215 HOH HOH . H 5 HOH A 3 503 194 HOH HOH . H 5 HOH A 4 504 131 HOH HOH . H 5 HOH A 5 505 207 HOH HOH . H 5 HOH A 6 506 191 HOH HOH . H 5 HOH A 7 507 70 HOH HOH . H 5 HOH A 8 508 37 HOH HOH . H 5 HOH A 9 509 9 HOH HOH . H 5 HOH A 10 510 80 HOH HOH . H 5 HOH A 11 511 137 HOH HOH . H 5 HOH A 12 512 117 HOH HOH . H 5 HOH A 13 513 206 HOH HOH . H 5 HOH A 14 514 65 HOH HOH . H 5 HOH A 15 515 55 HOH HOH . H 5 HOH A 16 516 101 HOH HOH . H 5 HOH A 17 517 8 HOH HOH . H 5 HOH A 18 518 107 HOH HOH . H 5 HOH A 19 519 20 HOH HOH . H 5 HOH A 20 520 54 HOH HOH . H 5 HOH A 21 521 121 HOH HOH . H 5 HOH A 22 522 28 HOH HOH . H 5 HOH A 23 523 56 HOH HOH . H 5 HOH A 24 524 23 HOH HOH . H 5 HOH A 25 525 172 HOH HOH . H 5 HOH A 26 526 113 HOH HOH . H 5 HOH A 27 527 163 HOH HOH . H 5 HOH A 28 528 212 HOH HOH . H 5 HOH A 29 529 118 HOH HOH . H 5 HOH A 30 530 48 HOH HOH . H 5 HOH A 31 531 96 HOH HOH . H 5 HOH A 32 532 26 HOH HOH . H 5 HOH A 33 533 135 HOH HOH . H 5 HOH A 34 534 52 HOH HOH . H 5 HOH A 35 535 83 HOH HOH . H 5 HOH A 36 536 15 HOH HOH . H 5 HOH A 37 537 58 HOH HOH . H 5 HOH A 38 538 27 HOH HOH . H 5 HOH A 39 539 21 HOH HOH . H 5 HOH A 40 540 187 HOH HOH . H 5 HOH A 41 541 13 HOH HOH . H 5 HOH A 42 542 146 HOH HOH . H 5 HOH A 43 543 41 HOH HOH . H 5 HOH A 44 544 3 HOH HOH . H 5 HOH A 45 545 130 HOH HOH . H 5 HOH A 46 546 31 HOH HOH . H 5 HOH A 47 547 7 HOH HOH . H 5 HOH A 48 548 44 HOH HOH . H 5 HOH A 49 549 2 HOH HOH . H 5 HOH A 50 550 29 HOH HOH . H 5 HOH A 51 551 64 HOH HOH . H 5 HOH A 52 552 198 HOH HOH . H 5 HOH A 53 553 109 HOH HOH . H 5 HOH A 54 554 18 HOH HOH . H 5 HOH A 55 555 6 HOH HOH . H 5 HOH A 56 556 33 HOH HOH . H 5 HOH A 57 557 115 HOH HOH . H 5 HOH A 58 558 140 HOH HOH . H 5 HOH A 59 559 72 HOH HOH . H 5 HOH A 60 560 211 HOH HOH . H 5 HOH A 61 561 127 HOH HOH . H 5 HOH A 62 562 203 HOH HOH . H 5 HOH A 63 563 10 HOH HOH . H 5 HOH A 64 564 25 HOH HOH . H 5 HOH A 65 565 79 HOH HOH . H 5 HOH A 66 566 216 HOH HOH . H 5 HOH A 67 567 66 HOH HOH . H 5 HOH A 68 568 81 HOH HOH . H 5 HOH A 69 569 50 HOH HOH . H 5 HOH A 70 570 4 HOH HOH . H 5 HOH A 71 571 91 HOH HOH . H 5 HOH A 72 572 11 HOH HOH . H 5 HOH A 73 573 5 HOH HOH . H 5 HOH A 74 574 110 HOH HOH . H 5 HOH A 75 575 141 HOH HOH . H 5 HOH A 76 576 12 HOH HOH . H 5 HOH A 77 577 116 HOH HOH . H 5 HOH A 78 578 34 HOH HOH . H 5 HOH A 79 579 106 HOH HOH . H 5 HOH A 80 580 153 HOH HOH . H 5 HOH A 81 581 169 HOH HOH . H 5 HOH A 82 582 134 HOH HOH . H 5 HOH A 83 583 57 HOH HOH . H 5 HOH A 84 584 196 HOH HOH . H 5 HOH A 85 585 61 HOH HOH . H 5 HOH A 86 586 108 HOH HOH . H 5 HOH A 87 587 217 HOH HOH . H 5 HOH A 88 588 14 HOH HOH . H 5 HOH A 89 589 77 HOH HOH . H 5 HOH A 90 590 158 HOH HOH . H 5 HOH A 91 591 82 HOH HOH . H 5 HOH A 92 592 24 HOH HOH . H 5 HOH A 93 593 193 HOH HOH . H 5 HOH A 94 594 124 HOH HOH . H 5 HOH A 95 595 30 HOH HOH . H 5 HOH A 96 596 126 HOH HOH . H 5 HOH A 97 597 19 HOH HOH . H 5 HOH A 98 598 168 HOH HOH . H 5 HOH A 99 599 22 HOH HOH . H 5 HOH A 100 600 51 HOH HOH . H 5 HOH A 101 601 97 HOH HOH . H 5 HOH A 102 602 221 HOH HOH . H 5 HOH A 103 603 170 HOH HOH . H 5 HOH A 104 604 75 HOH HOH . H 5 HOH A 105 605 35 HOH HOH . H 5 HOH A 106 606 98 HOH HOH . H 5 HOH A 107 607 59 HOH HOH . H 5 HOH A 108 608 197 HOH HOH . H 5 HOH A 109 609 40 HOH HOH . H 5 HOH A 110 610 69 HOH HOH . H 5 HOH A 111 611 209 HOH HOH . H 5 HOH A 112 612 62 HOH HOH . H 5 HOH A 113 613 192 HOH HOH . H 5 HOH A 114 614 123 HOH HOH . H 5 HOH A 115 615 53 HOH HOH . H 5 HOH A 116 616 39 HOH HOH . H 5 HOH A 117 617 154 HOH HOH . H 5 HOH A 118 618 190 HOH HOH . H 5 HOH A 119 619 93 HOH HOH . H 5 HOH A 120 620 199 HOH HOH . H 5 HOH A 121 621 74 HOH HOH . H 5 HOH A 122 622 76 HOH HOH . H 5 HOH A 123 623 47 HOH HOH . H 5 HOH A 124 624 174 HOH HOH . H 5 HOH A 125 625 185 HOH HOH . H 5 HOH A 126 626 188 HOH HOH . H 5 HOH A 127 627 42 HOH HOH . H 5 HOH A 128 628 177 HOH HOH . H 5 HOH A 129 629 73 HOH HOH . H 5 HOH A 130 630 67 HOH HOH . H 5 HOH A 131 631 43 HOH HOH . H 5 HOH A 132 632 38 HOH HOH . H 5 HOH A 133 633 112 HOH HOH . H 5 HOH A 134 634 175 HOH HOH . H 5 HOH A 135 635 156 HOH HOH . H 5 HOH A 136 636 71 HOH HOH . H 5 HOH A 137 637 36 HOH HOH . H 5 HOH A 138 638 95 HOH HOH . H 5 HOH A 139 639 45 HOH HOH . H 5 HOH A 140 640 178 HOH HOH . H 5 HOH A 141 641 144 HOH HOH . H 5 HOH A 142 642 157 HOH HOH . H 5 HOH A 143 643 16 HOH HOH . H 5 HOH A 144 644 128 HOH HOH . H 5 HOH A 145 645 49 HOH HOH . H 5 HOH A 146 646 46 HOH HOH . H 5 HOH A 147 647 60 HOH HOH . H 5 HOH A 148 648 63 HOH HOH . H 5 HOH A 149 649 32 HOH HOH . H 5 HOH A 150 650 125 HOH HOH . H 5 HOH A 151 651 1 HOH HOH . H 5 HOH A 152 652 92 HOH HOH . H 5 HOH A 153 653 182 HOH HOH . H 5 HOH A 154 654 183 HOH HOH . H 5 HOH A 155 655 78 HOH HOH . H 5 HOH A 156 656 105 HOH HOH . H 5 HOH A 157 657 159 HOH HOH . H 5 HOH A 158 658 145 HOH HOH . H 5 HOH A 159 659 147 HOH HOH . H 5 HOH A 160 660 84 HOH HOH . H 5 HOH A 161 661 151 HOH HOH . H 5 HOH A 162 662 162 HOH HOH . H 5 HOH A 163 663 218 HOH HOH . H 5 HOH A 164 664 213 HOH HOH . H 5 HOH A 165 665 88 HOH HOH . H 5 HOH A 166 666 186 HOH HOH . H 5 HOH A 167 667 208 HOH HOH . H 5 HOH A 168 668 220 HOH HOH . H 5 HOH A 169 669 122 HOH HOH . H 5 HOH A 170 670 100 HOH HOH . H 5 HOH A 171 671 94 HOH HOH . H 5 HOH A 172 672 189 HOH HOH . H 5 HOH A 173 673 161 HOH HOH . H 5 HOH A 174 674 195 HOH HOH . H 5 HOH A 175 675 173 HOH HOH . H 5 HOH A 176 676 136 HOH HOH . H 5 HOH A 177 677 176 HOH HOH . H 5 HOH A 178 678 171 HOH HOH . H 5 HOH A 179 679 111 HOH HOH . H 5 HOH A 180 680 219 HOH HOH . H 5 HOH A 181 681 200 HOH HOH . H 5 HOH A 182 682 87 HOH HOH . H 5 HOH A 183 683 86 HOH HOH . H 5 HOH A 184 684 166 HOH HOH . H 5 HOH A 185 685 120 HOH HOH . H 5 HOH A 186 686 152 HOH HOH . H 5 HOH A 187 687 204 HOH HOH . H 5 HOH A 188 688 214 HOH HOH . H 5 HOH A 189 689 210 HOH HOH . H 5 HOH A 190 690 205 HOH HOH . H 5 HOH A 191 691 201 HOH HOH . H 5 HOH A 192 692 202 HOH HOH . H 5 HOH A 193 693 139 HOH HOH . H 5 HOH A 194 694 17 HOH HOH . H 5 HOH A 195 695 160 HOH HOH . H 5 HOH A 196 696 142 HOH HOH . H 5 HOH A 197 697 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 -38.235 14.759 -34.663 1 34.23 ? C1 GOL 404 A 1 HETATM 2 O O1 GOL . . . E 4 -38.416 15.269 -35.947 1 32.69 ? O1 GOL 404 A 1 HETATM 3 C C2 GOL . . . E 4 -38.84 15.787 -33.674 1 51.67 ? C2 GOL 404 A 1 HETATM 4 O O2 GOL . . . E 4 -40.069 15.384 -33.17 1 48.12 ? O2 GOL 404 A 1 HETATM 5 C C3 GOL . . . E 4 -37.792 15.93 -32.563 1 40.76 ? C3 GOL 404 A 1 HETATM 6 O O3 GOL . . . E 4 -38.159 17.056 -31.836 1 54.08 ? O3 GOL 404 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #