data_7MNF # _model_server_result.job_id kK1pXLaAfBTj7fCmqeEODQ _model_server_result.datetime_utc '2024-11-16 15:50:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mnf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":406}' # _entry.id 7MNF # _exptl.entry_id 7MNF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7MNF _cell.length_a 88.331 _cell.length_b 88.331 _cell.length_c 72.646 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MNF _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7MNF _atom_sites.fract_transf_matrix[1][1] 0.011321 _atom_sites.fract_transf_matrix[1][2] 0.006536 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013072 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OTA A 1 401 402 OTA OTA . C 3 CL A 1 402 1 CL CL . D 3 CL A 1 403 3 CL CL . E 3 CL A 1 404 4 CL CL . F 3 CL A 1 405 5 CL CL . G 4 GOL A 1 406 1 GOL GOL . H 5 TRS A 1 407 1 TRS TRS . I 6 HOH A 1 501 262 HOH HOH . I 6 HOH A 2 502 252 HOH HOH . I 6 HOH A 3 503 198 HOH HOH . I 6 HOH A 4 504 201 HOH HOH . I 6 HOH A 5 505 210 HOH HOH . I 6 HOH A 6 506 207 HOH HOH . I 6 HOH A 7 507 218 HOH HOH . I 6 HOH A 8 508 209 HOH HOH . I 6 HOH A 9 509 199 HOH HOH . I 6 HOH A 10 510 133 HOH HOH . I 6 HOH A 11 511 203 HOH HOH . I 6 HOH A 12 512 108 HOH HOH . I 6 HOH A 13 513 173 HOH HOH . I 6 HOH A 14 514 190 HOH HOH . I 6 HOH A 15 515 150 HOH HOH . I 6 HOH A 16 516 195 HOH HOH . I 6 HOH A 17 517 194 HOH HOH . I 6 HOH A 18 518 54 HOH HOH . I 6 HOH A 19 519 78 HOH HOH . I 6 HOH A 20 520 45 HOH HOH . I 6 HOH A 21 521 74 HOH HOH . I 6 HOH A 22 522 197 HOH HOH . I 6 HOH A 23 523 148 HOH HOH . I 6 HOH A 24 524 84 HOH HOH . I 6 HOH A 25 525 128 HOH HOH . I 6 HOH A 26 526 95 HOH HOH . I 6 HOH A 27 527 164 HOH HOH . I 6 HOH A 28 528 101 HOH HOH . I 6 HOH A 29 529 250 HOH HOH . I 6 HOH A 30 530 220 HOH HOH . I 6 HOH A 31 531 200 HOH HOH . I 6 HOH A 32 532 83 HOH HOH . I 6 HOH A 33 533 7 HOH HOH . I 6 HOH A 34 534 59 HOH HOH . I 6 HOH A 35 535 29 HOH HOH . I 6 HOH A 36 536 40 HOH HOH . I 6 HOH A 37 537 14 HOH HOH . I 6 HOH A 38 538 130 HOH HOH . I 6 HOH A 39 539 12 HOH HOH . I 6 HOH A 40 540 238 HOH HOH . I 6 HOH A 41 541 19 HOH HOH . I 6 HOH A 42 542 224 HOH HOH . I 6 HOH A 43 543 244 HOH HOH . I 6 HOH A 44 544 39 HOH HOH . I 6 HOH A 45 545 13 HOH HOH . I 6 HOH A 46 546 158 HOH HOH . I 6 HOH A 47 547 72 HOH HOH . I 6 HOH A 48 548 183 HOH HOH . I 6 HOH A 49 549 55 HOH HOH . I 6 HOH A 50 550 5 HOH HOH . I 6 HOH A 51 551 49 HOH HOH . I 6 HOH A 52 552 3 HOH HOH . I 6 HOH A 53 553 222 HOH HOH . I 6 HOH A 54 554 160 HOH HOH . I 6 HOH A 55 555 65 HOH HOH . I 6 HOH A 56 556 85 HOH HOH . I 6 HOH A 57 557 4 HOH HOH . I 6 HOH A 58 558 66 HOH HOH . I 6 HOH A 59 559 261 HOH HOH . I 6 HOH A 60 560 112 HOH HOH . I 6 HOH A 61 561 20 HOH HOH . I 6 HOH A 62 562 143 HOH HOH . I 6 HOH A 63 563 73 HOH HOH . I 6 HOH A 64 564 26 HOH HOH . I 6 HOH A 65 565 225 HOH HOH . I 6 HOH A 66 566 170 HOH HOH . I 6 HOH A 67 567 36 HOH HOH . I 6 HOH A 68 568 154 HOH HOH . I 6 HOH A 69 569 155 HOH HOH . I 6 HOH A 70 570 87 HOH HOH . I 6 HOH A 71 571 115 HOH HOH . I 6 HOH A 72 572 70 HOH HOH . I 6 HOH A 73 573 142 HOH HOH . I 6 HOH A 74 574 11 HOH HOH . I 6 HOH A 75 575 47 HOH HOH . I 6 HOH A 76 576 103 HOH HOH . I 6 HOH A 77 577 241 HOH HOH . I 6 HOH A 78 578 46 HOH HOH . I 6 HOH A 79 579 6 HOH HOH . I 6 HOH A 80 580 171 HOH HOH . I 6 HOH A 81 581 31 HOH HOH . I 6 HOH A 82 582 138 HOH HOH . I 6 HOH A 83 583 106 HOH HOH . I 6 HOH A 84 584 61 HOH HOH . I 6 HOH A 85 585 18 HOH HOH . I 6 HOH A 86 586 166 HOH HOH . I 6 HOH A 87 587 104 HOH HOH . I 6 HOH A 88 588 251 HOH HOH . I 6 HOH A 89 589 10 HOH HOH . I 6 HOH A 90 590 235 HOH HOH . I 6 HOH A 91 591 60 HOH HOH . I 6 HOH A 92 592 161 HOH HOH . I 6 HOH A 93 593 77 HOH HOH . I 6 HOH A 94 594 2 HOH HOH . I 6 HOH A 95 595 9 HOH HOH . I 6 HOH A 96 596 34 HOH HOH . I 6 HOH A 97 597 265 HOH HOH . I 6 HOH A 98 598 181 HOH HOH . I 6 HOH A 99 599 8 HOH HOH . I 6 HOH A 100 600 97 HOH HOH . I 6 HOH A 101 601 15 HOH HOH . I 6 HOH A 102 602 204 HOH HOH . I 6 HOH A 103 603 53 HOH HOH . I 6 HOH A 104 604 174 HOH HOH . I 6 HOH A 105 605 79 HOH HOH . I 6 HOH A 106 606 196 HOH HOH . I 6 HOH A 107 607 17 HOH HOH . I 6 HOH A 108 608 89 HOH HOH . I 6 HOH A 109 609 168 HOH HOH . I 6 HOH A 110 610 131 HOH HOH . I 6 HOH A 111 611 232 HOH HOH . I 6 HOH A 112 612 117 HOH HOH . I 6 HOH A 113 613 98 HOH HOH . I 6 HOH A 114 614 93 HOH HOH . I 6 HOH A 115 615 125 HOH HOH . I 6 HOH A 116 616 50 HOH HOH . I 6 HOH A 117 617 33 HOH HOH . I 6 HOH A 118 618 27 HOH HOH . I 6 HOH A 119 619 67 HOH HOH . I 6 HOH A 120 620 213 HOH HOH . I 6 HOH A 121 621 163 HOH HOH . I 6 HOH A 122 622 51 HOH HOH . I 6 HOH A 123 623 28 HOH HOH . I 6 HOH A 124 624 240 HOH HOH . I 6 HOH A 125 625 24 HOH HOH . I 6 HOH A 126 626 22 HOH HOH . I 6 HOH A 127 627 149 HOH HOH . I 6 HOH A 128 628 186 HOH HOH . I 6 HOH A 129 629 147 HOH HOH . I 6 HOH A 130 630 71 HOH HOH . I 6 HOH A 131 631 255 HOH HOH . I 6 HOH A 132 632 38 HOH HOH . I 6 HOH A 133 633 208 HOH HOH . I 6 HOH A 134 634 96 HOH HOH . I 6 HOH A 135 635 151 HOH HOH . I 6 HOH A 136 636 44 HOH HOH . I 6 HOH A 137 637 228 HOH HOH . I 6 HOH A 138 638 253 HOH HOH . I 6 HOH A 139 639 16 HOH HOH . I 6 HOH A 140 640 182 HOH HOH . I 6 HOH A 141 641 75 HOH HOH . I 6 HOH A 142 642 159 HOH HOH . I 6 HOH A 143 643 121 HOH HOH . I 6 HOH A 144 644 205 HOH HOH . I 6 HOH A 145 645 153 HOH HOH . I 6 HOH A 146 646 32 HOH HOH . I 6 HOH A 147 647 242 HOH HOH . I 6 HOH A 148 648 99 HOH HOH . I 6 HOH A 149 649 215 HOH HOH . I 6 HOH A 150 650 249 HOH HOH . I 6 HOH A 151 651 21 HOH HOH . I 6 HOH A 152 652 189 HOH HOH . I 6 HOH A 153 653 35 HOH HOH . I 6 HOH A 154 654 229 HOH HOH . I 6 HOH A 155 655 118 HOH HOH . I 6 HOH A 156 656 76 HOH HOH . I 6 HOH A 157 657 219 HOH HOH . I 6 HOH A 158 658 237 HOH HOH . I 6 HOH A 159 659 123 HOH HOH . I 6 HOH A 160 660 185 HOH HOH . I 6 HOH A 161 661 144 HOH HOH . I 6 HOH A 162 662 62 HOH HOH . I 6 HOH A 163 663 179 HOH HOH . I 6 HOH A 164 664 30 HOH HOH . I 6 HOH A 165 665 226 HOH HOH . I 6 HOH A 166 666 111 HOH HOH . I 6 HOH A 167 667 162 HOH HOH . I 6 HOH A 168 668 263 HOH HOH . I 6 HOH A 169 669 56 HOH HOH . I 6 HOH A 170 670 135 HOH HOH . I 6 HOH A 171 671 116 HOH HOH . I 6 HOH A 172 672 88 HOH HOH . I 6 HOH A 173 673 92 HOH HOH . I 6 HOH A 174 674 227 HOH HOH . I 6 HOH A 175 675 206 HOH HOH . I 6 HOH A 176 676 172 HOH HOH . I 6 HOH A 177 677 127 HOH HOH . I 6 HOH A 178 678 169 HOH HOH . I 6 HOH A 179 679 146 HOH HOH . I 6 HOH A 180 680 141 HOH HOH . I 6 HOH A 181 681 86 HOH HOH . I 6 HOH A 182 682 239 HOH HOH . I 6 HOH A 183 683 248 HOH HOH . I 6 HOH A 184 684 212 HOH HOH . I 6 HOH A 185 685 243 HOH HOH . I 6 HOH A 186 686 258 HOH HOH . I 6 HOH A 187 687 259 HOH HOH . I 6 HOH A 188 688 157 HOH HOH . I 6 HOH A 189 689 119 HOH HOH . I 6 HOH A 190 690 42 HOH HOH . I 6 HOH A 191 691 105 HOH HOH . I 6 HOH A 192 692 139 HOH HOH . I 6 HOH A 193 693 231 HOH HOH . I 6 HOH A 194 694 236 HOH HOH . I 6 HOH A 195 695 120 HOH HOH . I 6 HOH A 196 696 165 HOH HOH . I 6 HOH A 197 697 214 HOH HOH . I 6 HOH A 198 698 245 HOH HOH . I 6 HOH A 199 699 109 HOH HOH . I 6 HOH A 200 700 107 HOH HOH . I 6 HOH A 201 701 43 HOH HOH . I 6 HOH A 202 702 140 HOH HOH . I 6 HOH A 203 703 260 HOH HOH . I 6 HOH A 204 704 126 HOH HOH . I 6 HOH A 205 705 136 HOH HOH . I 6 HOH A 206 706 94 HOH HOH . I 6 HOH A 207 707 234 HOH HOH . I 6 HOH A 208 708 25 HOH HOH . I 6 HOH A 209 709 137 HOH HOH . I 6 HOH A 210 710 156 HOH HOH . I 6 HOH A 211 711 256 HOH HOH . I 6 HOH A 212 712 100 HOH HOH . I 6 HOH A 213 713 254 HOH HOH . I 6 HOH A 214 714 41 HOH HOH . I 6 HOH A 215 715 193 HOH HOH . I 6 HOH A 216 716 216 HOH HOH . I 6 HOH A 217 717 129 HOH HOH . I 6 HOH A 218 718 145 HOH HOH . I 6 HOH A 219 719 202 HOH HOH . I 6 HOH A 220 720 80 HOH HOH . I 6 HOH A 221 721 246 HOH HOH . I 6 HOH A 222 722 64 HOH HOH . I 6 HOH A 223 723 191 HOH HOH . I 6 HOH A 224 724 247 HOH HOH . I 6 HOH A 225 725 221 HOH HOH . I 6 HOH A 226 726 122 HOH HOH . I 6 HOH A 227 727 113 HOH HOH . I 6 HOH A 228 728 57 HOH HOH . I 6 HOH A 229 729 167 HOH HOH . I 6 HOH A 230 730 82 HOH HOH . I 6 HOH A 231 731 114 HOH HOH . I 6 HOH A 232 732 233 HOH HOH . I 6 HOH A 233 733 230 HOH HOH . I 6 HOH A 234 734 90 HOH HOH . I 6 HOH A 235 735 223 HOH HOH . I 6 HOH A 236 736 124 HOH HOH . I 6 HOH A 237 737 58 HOH HOH . I 6 HOH A 238 738 187 HOH HOH . I 6 HOH A 239 739 264 HOH HOH . I 6 HOH A 240 740 110 HOH HOH . I 6 HOH A 241 741 211 HOH HOH . I 6 HOH A 242 742 257 HOH HOH . I 6 HOH A 243 743 217 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 35.917 31.492 31.547 1 34.98 ? C1 GOL 406 A 1 HETATM 2 O O1 GOL . . . G 4 37.126 31.543 30.834 1 33.53 ? O1 GOL 406 A 1 HETATM 3 C C2 GOL . . . G 4 36.259 30.953 32.956 1 21.59 ? C2 GOL 406 A 1 HETATM 4 O O2 GOL . . . G 4 37.318 31.668 33.522 1 33.32 ? O2 GOL 406 A 1 HETATM 5 C C3 GOL . . . G 4 34.911 31.116 33.768 1 40.42 ? C3 GOL 406 A 1 HETATM 6 O O3 GOL . . . G 4 35.14 30.658 35.108 1 28.12 ? O3 GOL 406 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #