data_7MP0
#
_model_server_result.job_id            hdZTyEcOS_BDJC-rU1hb-Q 
_model_server_result.datetime_utc      '2024-11-17 00:27:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mp0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":502}' 
#
_entry.id    7MP0 
#
_exptl.entry_id    7MP0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              740.015 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7MP0 
_cell.length_a            168.995 
_cell.length_b            186.822 
_cell.length_c            90.539 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MP0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
_chem_comp.formula           'C6 H19 O27 P7' 
_chem_comp.formula_weight    740.015 
_chem_comp.id                I7P 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '1D-myo-inositol 5-diphosphate 1,2,3,4,6-pentakisphosphate' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O11 C1 I7P sing 167 n n 
C2 C1 I7P sing 168 n n 
C1 C6 I7P sing 169 n n 
C1 H1 I7P sing 170 n n 
O12 C2 I7P sing 171 n n 
C2 C3 I7P sing 172 n n 
C2 H2 I7P sing 173 n n 
O13 C3 I7P sing 174 n n 
C3 C4 I7P sing 175 n n 
C3 H3 I7P sing 176 n n 
C4 C5 I7P sing 177 n n 
C4 O14 I7P sing 178 n n 
C4 H4 I7P sing 179 n n 
C6 C5 I7P sing 180 n n 
C5 O15 I7P sing 181 n n 
C5 H5 I7P sing 182 n n 
C6 O16 I7P sing 183 n n 
C6 H6 I7P sing 184 n n 
PA1 O11 I7P sing 185 n n 
PA2 O12 I7P sing 186 n n 
O13 PA3 I7P sing 187 n n 
O14 PA4 I7P sing 188 n n 
O15 PA5 I7P sing 189 n n 
PA6 O16 I7P sing 190 n n 
PA1 O21 I7P sing 191 n n 
O21 HO21 I7P sing 192 n n 
O22 PA2 I7P sing 193 n n 
O22 HO22 I7P sing 194 n n 
PA3 O23 I7P sing 195 n n 
O23 HO23 I7P sing 196 n n 
O24 PA4 I7P sing 197 n n 
O24 HO24 I7P sing 198 n n 
PA5 O25 I7P doub 199 n n 
PA6 O26 I7P sing 200 n n 
O26 HO26 I7P sing 201 n n 
O31 PA1 I7P sing 202 n n 
O31 HO31 I7P sing 203 n n 
O32 PA2 I7P doub 204 n n 
O33 PA3 I7P doub 205 n n 
O34 PA4 I7P doub 206 n n 
PA5 O35 I7P sing 207 n n 
O35 HO35 I7P sing 208 n n 
PA6 O36 I7P sing 209 n n 
O36 HO36 I7P sing 210 n n 
O41 PA1 I7P doub 211 n n 
O42 PA2 I7P sing 212 n n 
O42 HO42 I7P sing 213 n n 
O43 PA3 I7P sing 214 n n 
O43 HO43 I7P sing 215 n n 
PA4 O44 I7P sing 216 n n 
O44 HO44 I7P sing 217 n n 
O45 PA5 I7P sing 218 n n 
O45 PB5 I7P sing 219 n n 
O46 PA6 I7P doub 220 n n 
PB5 O55 I7P sing 221 n n 
O55 HO55 I7P sing 222 n n 
O65 PB5 I7P sing 223 n n 
O65 HO65 I7P sing 224 n n 
O75 PB5 I7P doub 225 n n 
#
_atom_sites.entry_id                     7MP0 
_atom_sites.fract_transf_matrix[1][1]    0.005917 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005353 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011045 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ETX A 1 501 501 ETX ETX . 
F 3 I7P A 1 502 502 I7P I7P . 
G 3 I7P B 1 501 501 I7P I7P . 
H 3 I7P B 1 502 502 I7P I7P . 
I 3 I7P C 1 501 501 I7P I7P . 
J 3 I7P D 1 501 501 I7P I7P . 
K 4 HOH A 1 601 601 HOH HOH . 
K 4 HOH A 2 602 602 HOH HOH . 
K 4 HOH A 3 603 603 HOH HOH . 
K 4 HOH A 4 604 606 HOH HOH . 
K 4 HOH A 5 605 604 HOH HOH . 
K 4 HOH A 6 606 607 HOH HOH . 
K 4 HOH A 7 607 605 HOH HOH . 
K 4 HOH A 8 608 608 HOH HOH . 
K 4 HOH A 9 609 610 HOH HOH . 
K 4 HOH A 10 610 614 HOH HOH . 
K 4 HOH A 11 611 613 HOH HOH . 
K 4 HOH A 12 612 611 HOH HOH . 
K 4 HOH A 13 613 609 HOH HOH . 
K 4 HOH A 14 614 612 HOH HOH . 
K 4 HOH A 15 615 615 HOH HOH . 
K 4 HOH A 16 616 616 HOH HOH . 
K 4 HOH A 17 617 617 HOH HOH . 
K 4 HOH A 18 618 620 HOH HOH . 
K 4 HOH A 19 619 619 HOH HOH . 
K 4 HOH A 20 620 618 HOH HOH . 
L 4 HOH B 1 601 601 HOH HOH . 
L 4 HOH B 2 602 602 HOH HOH . 
L 4 HOH B 3 603 603 HOH HOH . 
L 4 HOH B 4 604 604 HOH HOH . 
L 4 HOH B 5 605 605 HOH HOH . 
L 4 HOH B 6 606 606 HOH HOH . 
L 4 HOH B 7 607 607 HOH HOH . 
L 4 HOH B 8 608 608 HOH HOH . 
L 4 HOH B 9 609 609 HOH HOH . 
L 4 HOH B 10 610 610 HOH HOH . 
L 4 HOH B 11 611 611 HOH HOH . 
M 4 HOH C 1 601 601 HOH HOH . 
M 4 HOH C 2 602 603 HOH HOH . 
M 4 HOH C 3 603 605 HOH HOH . 
M 4 HOH C 4 604 604 HOH HOH . 
M 4 HOH C 5 605 602 HOH HOH . 
M 4 HOH C 6 606 607 HOH HOH . 
M 4 HOH C 7 607 606 HOH HOH . 
M 4 HOH C 8 608 608 HOH HOH . 
M 4 HOH C 9 609 610 HOH HOH . 
M 4 HOH C 10 610 609 HOH HOH . 
M 4 HOH C 11 611 612 HOH HOH . 
M 4 HOH C 12 612 611 HOH HOH . 
M 4 HOH C 13 613 613 HOH HOH . 
M 4 HOH C 14 614 614 HOH HOH . 
M 4 HOH C 15 615 616 HOH HOH . 
M 4 HOH C 16 616 615 HOH HOH . 
N 4 HOH D 1 601 601 HOH HOH . 
N 4 HOH D 2 602 602 HOH HOH . 
N 4 HOH D 3 603 603 HOH HOH . 
N 4 HOH D 4 604 604 HOH HOH . 
N 4 HOH D 5 605 605 HOH HOH . 
N 4 HOH D 6 606 606 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 I7P . . . H 3 28.631 5.233 32.974 1 197.34 ? C1 I7P 502 B 1 
HETATM 2 C C2 I7P . . . H 3 29.168 4.572 31.721 1 198.58 ? C2 I7P 502 B 1 
HETATM 3 C C3 I7P . . . H 3 28.09 4.628 30.664 1 196.24 ? C3 I7P 502 B 1 
HETATM 4 C C4 I7P . . . H 3 27.882 6.084 30.295 1 193.21 ? C4 I7P 502 B 1 
HETATM 5 C C5 I7P . . . H 3 27.363 6.827 31.519 1 196.47 ? C5 I7P 502 B 1 
HETATM 6 C C6 I7P . . . H 3 28.35 6.702 32.679 1 197.25 ? C6 I7P 502 B 1 
HETATM 7 O O11 I7P . . . H 3 29.595 5.071 34.035 1 190.93 ? O11 I7P 502 B 1 
HETATM 8 O O12 I7P . . . H 3 30.288 5.351 31.239 1 194.37 ? O12 I7P 502 B 1 
HETATM 9 O O13 I7P . . . H 3 28.474 3.822 29.532 1 198.09 ? O13 I7P 502 B 1 
HETATM 10 O O14 I7P . . . H 3 26.939 6.176 29.208 1 189.15 ? O14 I7P 502 B 1 
HETATM 11 O O15 I7P . . . H 3 27.193 8.221 31.193 1 203.55 ? O15 I7P 502 B 1 
HETATM 12 O O16 I7P . . . H 3 27.77 7.309 33.852 1 201.87 ? O16 I7P 502 B 1 
HETATM 13 O O21 I7P . . . H 3 30.638 4.118 36.146 1 183.19 ? O21 I7P 502 B 1 
HETATM 14 O O22 I7P . . . H 3 32.46 5.872 32.365 1 175.06 -1 O22 I7P 502 B 1 
HETATM 15 O O23 I7P . . . H 3 28.054 2.004 27.821 1 190.22 ? O23 I7P 502 B 1 
HETATM 16 O O24 I7P . . . H 3 26.409 7.621 27.25 1 190.15 ? O24 I7P 502 B 1 
HETATM 17 O O25 I7P . . . H 3 24.983 9.156 30.255 1 215.21 -1 O25 I7P 502 B 1 
HETATM 18 O O26 I7P . . . H 3 27.896 7.602 36.349 1 198.34 ? O26 I7P 502 B 1 
HETATM 19 O O31 I7P . . . H 3 28.347 3.396 35.504 1 172.43 -1 O31 I7P 502 B 1 
HETATM 20 O O32 I7P . . . H 3 32.091 3.55 31.419 1 177.46 ? O32 I7P 502 B 1 
HETATM 21 O O33 I7P . . . H 3 29.218 1.393 29.989 1 179.73 -1 O33 I7P 502 B 1 
HETATM 22 O O34 I7P . . . H 3 26.909 5.183 26.854 1 182.49 -1 O34 I7P 502 B 1 
HETATM 23 O O35 I7P . . . H 3 26.318 10.467 31.953 1 211.2 ? O35 I7P 502 B 1 
HETATM 24 O O36 I7P . . . H 3 29.986 7.614 34.998 1 197.81 -1 O36 I7P 502 B 1 
HETATM 25 O O41 I7P . . . H 3 30.319 2.562 34.181 1 177.07 -1 O41 I7P 502 B 1 
HETATM 26 O O42 I7P . . . H 3 32.391 5.564 29.907 1 167.92 -1 O42 I7P 502 B 1 
HETATM 27 O O43 I7P . . . H 3 26.769 1.997 29.945 1 181.54 -1 O43 I7P 502 B 1 
HETATM 28 O O44 I7P . . . H 3 28.727 6.799 27.517 1 177.82 -1 O44 I7P 502 B 1 
HETATM 29 O O45 I7P . . . H 3 25.052 8.427 32.684 1 215.31 ? O45 I7P 502 B 1 
HETATM 30 O O46 I7P . . . H 3 28.4 9.57 34.841 1 197.29 -1 O46 I7P 502 B 1 
HETATM 31 O O55 I7P . . . H 3 24.104 6.682 34.179 1 192.69 -1 O55 I7P 502 B 1 
HETATM 32 O O65 I7P . . . H 3 22.596 8.3 33.017 1 203.44 -1 O65 I7P 502 B 1 
HETATM 33 O O75 I7P . . . H 3 23.743 6.481 31.682 1 200.92 ? O75 I7P 502 B 1 
HETATM 34 P PA1 I7P . . . H 3 29.753 3.707 34.967 1 181.5 ? PA1 I7P 502 B 1 
HETATM 35 P PA2 I7P . . . H 3 31.857 5.013 31.243 1 182.43 ? PA2 I7P 502 B 1 
HETATM 36 P PA3 I7P . . . H 3 28.161 2.229 29.333 1 190.94 ? PA3 I7P 502 B 1 
HETATM 37 P PA4 I7P . . . H 3 27.245 6.404 27.645 1 187.82 ? PA4 I7P 502 B 1 
HETATM 38 P PA5 I7P . . . H 3 25.826 9.106 31.466 1 216.81 ? PA5 I7P 502 B 1 
HETATM 39 P PA6 I7P . . . H 3 28.529 8.095 35.041 1 200.15 ? PA6 I7P 502 B 1 
HETATM 40 P PB5 I7P . . . H 3 23.832 7.405 32.847 1 207.02 ? PB5 I7P 502 B 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           602 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           40 
#