data_7MSQ # _model_server_result.job_id y3Xqca8JtcDLA8bNzIhDTg _model_server_result.datetime_utc '2024-11-21 11:22:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7msq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":301}' # _entry.id 7MSQ # _exptl.entry_id 7MSQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.082 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'THIOCYANATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MSQ _cell.length_a 109.764 _cell.length_b 115.494 _cell.length_c 240.758 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MSQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,Q,R,S,T,U,Y,Z 1 1 B,C,D,I,J,K,L,M,N,O,P,V,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 P N N ? 6 R N N ? 6 S N N ? 6 T N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 4 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 4 4 3 MAN BMA C1 O1 . O3 HO3 . sing 4 ? 4 5 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n G NAG 1 C 1 NAG A 529 NAG 4 n G NAG 2 C 2 NAG A 530 NAG 4 n G BMA 3 C 3 BMA A 531 BMA 4 n G MAN 4 C 4 MAN A 534 MAN 4 n G FUC 5 C 5 FUC A 537 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 336 1_555 A SG CYS 29 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? disulf ? disulf2 A SG CYS 47 A CYS 379 1_555 A SG CYS 100 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? disulf ? disulf3 A SG CYS 59 A CYS 391 1_555 A SG CYS 193 A CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? disulf ? disulf4 A SG CYS 148 A CYS 480 1_555 A SG CYS 156 A CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf5 B SG CYS 4 B CYS 336 1_555 B SG CYS 29 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf6 B SG CYS 47 B CYS 379 1_555 B SG CYS 100 B CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? disulf ? disulf7 B SG CYS 59 B CYS 391 1_555 B SG CYS 193 B CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf8 B SG CYS 148 B CYS 480 1_555 B SG CYS 156 B CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? disulf ? disulf9 C SG CYS 22 D CYS 22 1_555 C SG CYS 95 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? disulf ? disulf10 C SG CYS 154 D CYS 154 1_555 C SG CYS 210 D CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf11 D SG CYS 23 E CYS 23 1_555 D SG CYS 88 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? disulf ? disulf12 D SG CYS 134 E CYS 134 1_555 D SG CYS 194 E CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? disulf ? disulf13 E SG CYS 22 H CYS 22 1_555 E SG CYS 95 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? disulf ? disulf14 E SG CYS 154 H CYS 154 1_555 E SG CYS 210 H CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? disulf ? disulf15 F SG CYS 23 L CYS 23 1_555 F SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? disulf ? disulf16 F SG CYS 134 L CYS 134 1_555 F SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? covale ? covale1 A ND2 ASN 11 A ASN 343 1_555 G C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale2 G O4 NAG . C NAG 1 1_555 G C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale3 G O6 NAG . C NAG 1 1_555 G C1 FUC . C FUC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale4 G O4 NAG . C NAG 2 1_555 G C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale5 G O3 BMA . C BMA 3 1_555 G C1 MAN . C MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C N S -1' _chem_comp.formula_weight 58.082 _chem_comp.id SCN _chem_comp.mon_nstd_flag . _chem_comp.name 'THIOCYANATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C SCN sing 391 n n C N SCN trip 392 n n # _atom_sites.entry_id 7MSQ _atom_sites.fract_transf_matrix[1][1] 0.00911 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008658 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004154 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 5 CL A 1 601 4 CL CL . I 5 CL B 1 601 6 CL CL . J 6 SCN B 1 602 1 SCN SCN . K 5 CL D 1 301 1 CL CL . L 5 CL D 1 302 7 CL CL . M 7 GOL D 1 303 301 GOL GOL . N 5 CL E 1 301 2 CL CL . O 5 CL E 1 302 5 CL CL . P 6 SCN E 1 303 3 SCN SCN . Q 5 CL H 1 301 3 CL CL . R 6 SCN L 1 301 2 SCN SCN . S 6 SCN L 1 302 4 SCN SCN . T 6 SCN L 1 303 5 SCN SCN . U 8 HOH A 1 701 73 HOH HOH . U 8 HOH A 2 702 74 HOH HOH . U 8 HOH A 3 703 65 HOH HOH . U 8 HOH A 4 704 177 HOH HOH . U 8 HOH A 5 705 75 HOH HOH . U 8 HOH A 6 706 63 HOH HOH . U 8 HOH A 7 707 67 HOH HOH . U 8 HOH A 8 708 128 HOH HOH . U 8 HOH A 9 709 83 HOH HOH . U 8 HOH A 10 710 84 HOH HOH . V 8 HOH B 1 701 131 HOH HOH . V 8 HOH B 2 702 69 HOH HOH . V 8 HOH B 3 703 52 HOH HOH . V 8 HOH B 4 704 105 HOH HOH . V 8 HOH B 5 705 109 HOH HOH . V 8 HOH B 6 706 59 HOH HOH . V 8 HOH B 7 707 24 HOH HOH . V 8 HOH B 8 708 104 HOH HOH . V 8 HOH B 9 709 129 HOH HOH . V 8 HOH B 10 710 106 HOH HOH . V 8 HOH B 11 711 107 HOH HOH . V 8 HOH B 12 712 178 HOH HOH . V 8 HOH B 13 713 43 HOH HOH . V 8 HOH B 14 714 29 HOH HOH . V 8 HOH B 15 715 110 HOH HOH . V 8 HOH B 16 716 168 HOH HOH . V 8 HOH B 17 717 130 HOH HOH . V 8 HOH B 18 718 111 HOH HOH . W 8 HOH D 1 401 157 HOH HOH . W 8 HOH D 2 402 12 HOH HOH . W 8 HOH D 3 403 147 HOH HOH . W 8 HOH D 4 404 152 HOH HOH . W 8 HOH D 5 405 61 HOH HOH . W 8 HOH D 6 406 33 HOH HOH . W 8 HOH D 7 407 114 HOH HOH . W 8 HOH D 8 408 8 HOH HOH . W 8 HOH D 9 409 30 HOH HOH . W 8 HOH D 10 410 175 HOH HOH . W 8 HOH D 11 411 148 HOH HOH . W 8 HOH D 12 412 66 HOH HOH . W 8 HOH D 13 413 120 HOH HOH . W 8 HOH D 14 414 150 HOH HOH . W 8 HOH D 15 415 48 HOH HOH . W 8 HOH D 16 416 53 HOH HOH . W 8 HOH D 17 417 115 HOH HOH . W 8 HOH D 18 418 62 HOH HOH . W 8 HOH D 19 419 17 HOH HOH . W 8 HOH D 20 420 162 HOH HOH . W 8 HOH D 21 421 117 HOH HOH . W 8 HOH D 22 422 50 HOH HOH . W 8 HOH D 23 423 169 HOH HOH . W 8 HOH D 24 424 155 HOH HOH . W 8 HOH D 25 425 113 HOH HOH . W 8 HOH D 26 426 172 HOH HOH . W 8 HOH D 27 427 116 HOH HOH . W 8 HOH D 28 428 112 HOH HOH . W 8 HOH D 29 429 149 HOH HOH . W 8 HOH D 30 430 151 HOH HOH . W 8 HOH D 31 431 11 HOH HOH . W 8 HOH D 32 432 108 HOH HOH . X 8 HOH E 1 401 126 HOH HOH . X 8 HOH E 2 402 159 HOH HOH . X 8 HOH E 3 403 56 HOH HOH . X 8 HOH E 4 404 119 HOH HOH . X 8 HOH E 5 405 121 HOH HOH . X 8 HOH E 6 406 161 HOH HOH . X 8 HOH E 7 407 42 HOH HOH . X 8 HOH E 8 408 35 HOH HOH . X 8 HOH E 9 409 2 HOH HOH . X 8 HOH E 10 410 60 HOH HOH . X 8 HOH E 11 411 23 HOH HOH . X 8 HOH E 12 412 174 HOH HOH . X 8 HOH E 13 413 160 HOH HOH . X 8 HOH E 14 414 46 HOH HOH . X 8 HOH E 15 415 125 HOH HOH . X 8 HOH E 16 416 10 HOH HOH . X 8 HOH E 17 417 36 HOH HOH . X 8 HOH E 18 418 45 HOH HOH . X 8 HOH E 19 419 122 HOH HOH . X 8 HOH E 20 420 127 HOH HOH . X 8 HOH E 21 421 57 HOH HOH . X 8 HOH E 22 422 153 HOH HOH . X 8 HOH E 23 423 38 HOH HOH . X 8 HOH E 24 424 26 HOH HOH . X 8 HOH E 25 425 31 HOH HOH . X 8 HOH E 26 426 158 HOH HOH . X 8 HOH E 27 427 6 HOH HOH . X 8 HOH E 28 428 173 HOH HOH . X 8 HOH E 29 429 72 HOH HOH . X 8 HOH E 30 430 118 HOH HOH . X 8 HOH E 31 431 154 HOH HOH . X 8 HOH E 32 432 123 HOH HOH . X 8 HOH E 33 433 124 HOH HOH . X 8 HOH E 34 434 132 HOH HOH . X 8 HOH E 35 435 179 HOH HOH . Y 8 HOH H 1 401 139 HOH HOH . Y 8 HOH H 2 402 32 HOH HOH . Y 8 HOH H 3 403 13 HOH HOH . Y 8 HOH H 4 404 89 HOH HOH . Y 8 HOH H 5 405 80 HOH HOH . Y 8 HOH H 6 406 134 HOH HOH . Y 8 HOH H 7 407 34 HOH HOH . Y 8 HOH H 8 408 79 HOH HOH . Y 8 HOH H 9 409 22 HOH HOH . Y 8 HOH H 10 410 181 HOH HOH . Y 8 HOH H 11 411 87 HOH HOH . Y 8 HOH H 12 412 54 HOH HOH . Y 8 HOH H 13 413 138 HOH HOH . Y 8 HOH H 14 414 93 HOH HOH . Y 8 HOH H 15 415 47 HOH HOH . Y 8 HOH H 16 416 28 HOH HOH . Y 8 HOH H 17 417 81 HOH HOH . Y 8 HOH H 18 418 21 HOH HOH . Y 8 HOH H 19 419 137 HOH HOH . Y 8 HOH H 20 420 39 HOH HOH . Y 8 HOH H 21 421 140 HOH HOH . Y 8 HOH H 22 422 41 HOH HOH . Y 8 HOH H 23 423 25 HOH HOH . Y 8 HOH H 24 424 163 HOH HOH . Y 8 HOH H 25 425 171 HOH HOH . Y 8 HOH H 26 426 76 HOH HOH . Y 8 HOH H 27 427 133 HOH HOH . Y 8 HOH H 28 428 64 HOH HOH . Y 8 HOH H 29 429 51 HOH HOH . Y 8 HOH H 30 430 86 HOH HOH . Y 8 HOH H 31 431 92 HOH HOH . Y 8 HOH H 32 432 95 HOH HOH . Y 8 HOH H 33 433 176 HOH HOH . Y 8 HOH H 34 434 78 HOH HOH . Y 8 HOH H 35 435 136 HOH HOH . Y 8 HOH H 36 436 135 HOH HOH . Y 8 HOH H 37 437 77 HOH HOH . Y 8 HOH H 38 438 94 HOH HOH . Z 8 HOH L 1 401 144 HOH HOH . Z 8 HOH L 2 402 141 HOH HOH . Z 8 HOH L 3 403 166 HOH HOH . Z 8 HOH L 4 404 91 HOH HOH . Z 8 HOH L 5 405 101 HOH HOH . Z 8 HOH L 6 406 100 HOH HOH . Z 8 HOH L 7 407 9 HOH HOH . Z 8 HOH L 8 408 180 HOH HOH . Z 8 HOH L 9 409 70 HOH HOH . Z 8 HOH L 10 410 37 HOH HOH . Z 8 HOH L 11 411 55 HOH HOH . Z 8 HOH L 12 412 27 HOH HOH . Z 8 HOH L 13 413 96 HOH HOH . Z 8 HOH L 14 414 1 HOH HOH . Z 8 HOH L 15 415 164 HOH HOH . Z 8 HOH L 16 416 103 HOH HOH . Z 8 HOH L 17 417 58 HOH HOH . Z 8 HOH L 18 418 16 HOH HOH . Z 8 HOH L 19 419 98 HOH HOH . Z 8 HOH L 20 420 40 HOH HOH . Z 8 HOH L 21 421 97 HOH HOH . Z 8 HOH L 22 422 102 HOH HOH . Z 8 HOH L 23 423 170 HOH HOH . Z 8 HOH L 24 424 99 HOH HOH . Z 8 HOH L 25 425 90 HOH HOH . Z 8 HOH L 26 426 167 HOH HOH . Z 8 HOH L 27 427 88 HOH HOH . Z 8 HOH L 28 428 143 HOH HOH . Z 8 HOH L 29 429 142 HOH HOH . Z 8 HOH L 30 430 145 HOH HOH . Z 8 HOH L 31 431 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SCN . . . R 6 10.177 9.882 48.313 1 88.86 ? S SCN 301 L 1 HETATM 2 C C SCN . . . R 6 10.937 11.087 49.002 1 69.71 ? C SCN 301 L 1 HETATM 3 N N SCN . . . R 6 11.484 11.974 49.544 1 60.01 ? N SCN 301 L 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 3 #