data_7MT9
#
_model_server_result.job_id            8Plb_LIgi2YXDiYZ-Tqb_Q 
_model_server_result.datetime_utc      '2024-11-04 22:50:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mt9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    7MT9 
#
_exptl.entry_id    7MT9 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              309.278 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            SANGIVAMYCIN 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             110 
_struct_conn.ptnr1_auth_asym_id             R 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              110 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             187 
_struct_conn.ptnr2_auth_asym_id             R 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              187 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.025 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C12 H15 N5 O5' 
_chem_comp.formula_weight    309.278 
_chem_comp.id                SGV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              SANGIVAMYCIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     4-amino-7-beta-D-ribofuranosyl-7H-pyrrolo[2,3-d]pyrimidine-5-carboxamide 
#
_atom_sites.entry_id                     7MT9 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SGV G 1 601 1 SGV SGV . 
D 4 RET R 1 401 1 RET RET . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 SGV . . . C 3 104.05 99.097 139.13 1 0 ? N1 SGV 601 G 1 
HETATM 2 C C2 SGV . . . C 3 103.557 100.104 138.367 1 0 ? C2 SGV 601 G 1 
HETATM 3 N N3 SGV . . . C 3 104.199 101.221 137.944 1 0 ? N3 SGV 601 G 1 
HETATM 4 C C4 SGV . . . C 3 105.489 101.262 138.349 1 0 ? C4 SGV 601 G 1 
HETATM 5 C C5 SGV . . . C 3 106.136 100.304 139.141 1 0 ? C5 SGV 601 G 1 
HETATM 6 C C6 SGV . . . C 3 105.349 99.187 139.544 1 0 ? C6 SGV 601 G 1 
HETATM 7 N N6 SGV . . . C 3 105.845 98.173 140.365 1 0 ? N6 SGV 601 G 1 
HETATM 8 C C7 SGV . . . C 3 107.485 100.778 139.326 1 0 ? C7 SGV 601 G 1 
HETATM 9 C C8 SGV . . . C 3 107.575 101.98 138.644 1 0 ? C8 SGV 601 G 1 
HETATM 10 N N9 SGV . . . C 3 106.37 102.269 138.067 1 0 ? N9 SGV 601 G 1 
HETATM 11 C C1' SGV . . . C 3 106.012 103.496 137.355 1 0 ? C1' SGV 601 G 1 
HETATM 12 C C10 SGV . . . C 3 108.559 100.191 140.114 1 0 ? C10 SGV 601 G 1 
HETATM 13 N N11 SGV . . . C 3 109.826 100.614 139.783 1 0 ? N11 SGV 601 G 1 
HETATM 14 O O12 SGV . . . C 3 108.355 99.39 141.012 1 0 ? O12 SGV 601 G 1 
HETATM 15 C C2' SGV . . . C 3 105.559 104.577 138.318 1 0 ? C2' SGV 601 G 1 
HETATM 16 O O2' SGV . . . C 3 104.532 105.333 137.677 1 0 ? O2' SGV 601 G 1 
HETATM 17 C C3' SGV . . . C 3 106.822 105.383 138.475 1 0 ? C3' SGV 601 G 1 
HETATM 18 O O3' SGV . . . C 3 106.621 106.714 138.937 1 0 ? O3' SGV 601 G 1 
HETATM 19 C C4' SGV . . . C 3 107.391 105.342 137.084 1 0 ? C4' SGV 601 G 1 
HETATM 20 O O4' SGV . . . C 3 107.155 104.003 136.637 1 0 ? O4' SGV 601 G 1 
HETATM 21 C C5' SGV . . . C 3 108.876 105.661 137.102 1 0 ? C5' SGV 601 G 1 
HETATM 22 O O5' SGV . . . C 3 109.324 105.938 135.784 1 0 ? O5' SGV 601 G 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           1509 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           22 
#