data_7MU8 # _model_server_result.job_id qq8RZ3BrqY9l-26kuIMRFA _model_server_result.datetime_utc '2025-03-05 18:12:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mu8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":202}' # _entry.id 7MU8 # _exptl.entry_id 7MU8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7MU8 _cell.length_a 93.455 _cell.length_b 93.455 _cell.length_c 134.665 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 70 A ASN 70 1_555 C C1 NAG . A NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.39 ? covale ? covale2 B ND2 ASN 70 B ASN 70 1_555 K C1 NAG . B NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? covale ? covale3 B ND2 ASN 77 B ASN 77 1_555 L C1 NAG . B NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7MU8 _atom_sites.fract_transf_matrix[1][1] 0.0107 _atom_sites.fract_transf_matrix[1][2] 0.006178 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007426 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 201 201 NAG NAG . D 3 GOL A 1 202 301 GOL GOL . E 3 GOL A 1 203 302 GOL GOL . F 3 GOL A 1 204 303 GOL GOL . G 3 GOL A 1 205 304 GOL GOL . H 3 GOL A 1 206 305 GOL GOL . I 3 GOL A 1 207 306 GOL GOL . J 4 SO4 A 1 208 401 SO4 SO4 . K 2 NAG B 1 201 201 NAG NAG . L 2 NAG B 1 202 202 NAG NAG . M 3 GOL B 1 203 301 GOL GOL . N 3 GOL B 1 204 302 GOL GOL . O 3 GOL B 1 205 303 GOL GOL . P 3 GOL B 1 206 304 GOL GOL . Q 5 HOH A 1 301 530 HOH HOH . Q 5 HOH A 2 302 539 HOH HOH . Q 5 HOH A 3 303 515 HOH HOH . Q 5 HOH A 4 304 508 HOH HOH . Q 5 HOH A 5 305 525 HOH HOH . Q 5 HOH A 6 306 512 HOH HOH . Q 5 HOH A 7 307 546 HOH HOH . Q 5 HOH A 8 308 502 HOH HOH . Q 5 HOH A 9 309 518 HOH HOH . Q 5 HOH A 10 310 503 HOH HOH . Q 5 HOH A 11 311 536 HOH HOH . Q 5 HOH A 12 312 522 HOH HOH . Q 5 HOH A 13 313 524 HOH HOH . Q 5 HOH A 14 314 504 HOH HOH . Q 5 HOH A 15 315 531 HOH HOH . Q 5 HOH A 16 316 511 HOH HOH . Q 5 HOH A 17 317 538 HOH HOH . Q 5 HOH A 18 318 532 HOH HOH . Q 5 HOH A 19 319 507 HOH HOH . Q 5 HOH A 20 320 503 HOH HOH . Q 5 HOH A 21 321 532 HOH HOH . Q 5 HOH A 22 322 537 HOH HOH . Q 5 HOH A 23 323 509 HOH HOH . Q 5 HOH A 24 324 506 HOH HOH . Q 5 HOH A 25 325 502 HOH HOH . Q 5 HOH A 26 326 535 HOH HOH . Q 5 HOH A 27 327 527 HOH HOH . Q 5 HOH A 28 328 541 HOH HOH . Q 5 HOH A 29 329 520 HOH HOH . Q 5 HOH A 30 330 523 HOH HOH . Q 5 HOH A 31 331 521 HOH HOH . Q 5 HOH A 32 332 514 HOH HOH . Q 5 HOH A 33 333 542 HOH HOH . Q 5 HOH A 34 334 545 HOH HOH . Q 5 HOH A 35 335 519 HOH HOH . Q 5 HOH A 36 336 510 HOH HOH . Q 5 HOH A 37 337 536 HOH HOH . Q 5 HOH A 38 338 517 HOH HOH . Q 5 HOH A 39 339 513 HOH HOH . Q 5 HOH A 40 340 544 HOH HOH . Q 5 HOH A 41 341 516 HOH HOH . Q 5 HOH A 42 342 505 HOH HOH . Q 5 HOH A 43 343 529 HOH HOH . Q 5 HOH A 44 344 526 HOH HOH . Q 5 HOH A 45 345 543 HOH HOH . Q 5 HOH A 46 346 533 HOH HOH . Q 5 HOH A 47 347 528 HOH HOH . Q 5 HOH A 48 348 534 HOH HOH . R 5 HOH B 1 301 538 HOH HOH . R 5 HOH B 2 302 530 HOH HOH . R 5 HOH B 3 303 528 HOH HOH . R 5 HOH B 4 304 519 HOH HOH . R 5 HOH B 5 305 520 HOH HOH . R 5 HOH B 6 306 501 HOH HOH . R 5 HOH B 7 307 524 HOH HOH . R 5 HOH B 8 308 508 HOH HOH . R 5 HOH B 9 309 514 HOH HOH . R 5 HOH B 10 310 518 HOH HOH . R 5 HOH B 11 311 507 HOH HOH . R 5 HOH B 12 312 506 HOH HOH . R 5 HOH B 13 313 516 HOH HOH . R 5 HOH B 14 314 546 HOH HOH . R 5 HOH B 15 315 535 HOH HOH . R 5 HOH B 16 316 517 HOH HOH . R 5 HOH B 17 317 510 HOH HOH . R 5 HOH B 18 318 539 HOH HOH . R 5 HOH B 19 319 521 HOH HOH . R 5 HOH B 20 320 543 HOH HOH . R 5 HOH B 21 321 515 HOH HOH . R 5 HOH B 22 322 525 HOH HOH . R 5 HOH B 23 323 501 HOH HOH . R 5 HOH B 24 324 527 HOH HOH . R 5 HOH B 25 325 552 HOH HOH . R 5 HOH B 26 326 542 HOH HOH . R 5 HOH B 27 327 505 HOH HOH . R 5 HOH B 28 328 540 HOH HOH . R 5 HOH B 29 329 548 HOH HOH . R 5 HOH B 30 330 545 HOH HOH . R 5 HOH B 31 331 537 HOH HOH . R 5 HOH B 32 332 549 HOH HOH . R 5 HOH B 33 333 509 HOH HOH . R 5 HOH B 34 334 511 HOH HOH . R 5 HOH B 35 335 504 HOH HOH . R 5 HOH B 36 336 531 HOH HOH . R 5 HOH B 37 337 513 HOH HOH . R 5 HOH B 38 338 541 HOH HOH . R 5 HOH B 39 339 522 HOH HOH . R 5 HOH B 40 340 547 HOH HOH . R 5 HOH B 41 341 512 HOH HOH . R 5 HOH B 42 342 523 HOH HOH . R 5 HOH B 43 343 529 HOH HOH . R 5 HOH B 44 344 550 HOH HOH . R 5 HOH B 45 345 544 HOH HOH . R 5 HOH B 46 346 533 HOH HOH . R 5 HOH B 47 347 534 HOH HOH . R 5 HOH B 48 348 551 HOH HOH . R 5 HOH B 49 349 540 HOH HOH . R 5 HOH B 50 350 526 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . L 2 -29.317 32.483 -12.183 1 53.29 ? C1 NAG 202 B 1 HETATM 2 C C2 NAG . . . L 2 -28.793 33.175 -13.447 1 53.35 ? C2 NAG 202 B 1 HETATM 3 C C3 NAG . . . L 2 -28.428 34.628 -13.14 1 52.59 ? C3 NAG 202 B 1 HETATM 4 C C4 NAG . . . L 2 -29.607 35.355 -12.508 1 58.74 ? C4 NAG 202 B 1 HETATM 5 C C5 NAG . . . L 2 -30.08 34.602 -11.268 1 61.93 ? C5 NAG 202 B 1 HETATM 6 C C6 NAG . . . L 2 -31.318 35.202 -10.644 1 62.6 ? C6 NAG 202 B 1 HETATM 7 C C7 NAG . . . L 2 -27.651 31.913 -15.222 1 48.6 ? C7 NAG 202 B 1 HETATM 8 C C8 NAG . . . L 2 -26.379 31.231 -15.638 1 39.92 ? C8 NAG 202 B 1 HETATM 9 N N2 NAG . . . L 2 -27.648 32.469 -14.003 1 49.36 ? N2 NAG 202 B 1 HETATM 10 O O3 NAG . . . L 2 -28.039 35.288 -14.338 1 56.89 ? O3 NAG 202 B 1 HETATM 11 O O4 NAG . . . L 2 -29.225 36.675 -12.14 1 63.35 ? O4 NAG 202 B 1 HETATM 12 O O5 NAG . . . L 2 -30.415 33.253 -11.622 1 59.25 ? O5 NAG 202 B 1 HETATM 13 O O6 NAG . . . L 2 -32.429 35.127 -11.527 1 68.99 ? O6 NAG 202 B 1 HETATM 14 O O7 NAG . . . L 2 -28.638 31.953 -15.956 1 44.49 ? O7 NAG 202 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #