data_7MYL # _model_server_result.job_id 3y71oSCaTrEZRaDIy8HhWQ _model_server_result.datetime_utc '2024-11-18 00:33:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7myl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":201}' # _entry.id 7MYL # _exptl.entry_id 7MYL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.318 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIMETHOPRIM _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.56 _cell.angle_gamma 90 _cell.entry_id 7MYL _cell.length_a 55.072 _cell.length_b 72.89 _cell.length_c 125.122 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MYL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,M 1 1 D,J,P 1 2 B,C,H,I,N,O 2 1 E,F,K,L,Q,R 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -55.072 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C14 H18 N4 O3' _chem_comp.formula_weight 290.318 _chem_comp.id TOP _chem_comp.mon_nstd_flag . _chem_comp.name TRIMETHOPRIM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 TOP doub 293 n y C1 C8 TOP sing 294 n y C1 H1 TOP sing 295 n n N2 C3 TOP sing 296 n y C3 N4 TOP sing 297 n n C3 N5 TOP doub 298 n y N4 HN41 TOP sing 299 n n N4 HN42 TOP sing 300 n n N5 C6 TOP sing 301 n y C6 N7 TOP sing 302 n n C6 C8 TOP doub 303 n y N7 HN71 TOP sing 304 n n N7 HN72 TOP sing 305 n n C8 C9 TOP sing 306 n n C9 C10 TOP sing 307 n n C9 H91 TOP sing 308 n n C9 H92 TOP sing 309 n n C10 C11 TOP doub 310 n y C10 C21 TOP sing 311 n y C11 C12 TOP sing 312 n y C11 H11 TOP sing 313 n n C12 O13 TOP sing 314 n n C12 C15 TOP doub 315 n y O13 C14 TOP sing 316 n n C14 H141 TOP sing 317 n n C14 H142 TOP sing 318 n n C14 H143 TOP sing 319 n n C15 O16 TOP sing 320 n n C15 C18 TOP sing 321 n y O16 C17 TOP sing 322 n n C17 H171 TOP sing 323 n n C17 H172 TOP sing 324 n n C17 H173 TOP sing 325 n n C18 O19 TOP sing 326 n n C18 C21 TOP doub 327 n y O19 C20 TOP sing 328 n n C20 H201 TOP sing 329 n n C20 H202 TOP sing 330 n n C20 H203 TOP sing 331 n n C21 H21 TOP sing 332 n n # _atom_sites.entry_id 7MYL _atom_sites.fract_transf_matrix[1][1] 0.018158 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000177 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007993 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 TOP A 1 201 201 TOP TOP . H 2 TOP B 1 201 201 TOP TOP . I 2 TOP C 1 201 201 TOP TOP . J 2 TOP D 1 201 201 TOP TOP . K 2 TOP E 1 201 201 TOP TOP . L 2 TOP F 1 201 201 TOP TOP . M 3 HOH A 1 301 47 HOH HOH . M 3 HOH A 2 302 31 HOH HOH . M 3 HOH A 3 303 43 HOH HOH . M 3 HOH A 4 304 13 HOH HOH . M 3 HOH A 5 305 17 HOH HOH . M 3 HOH A 6 306 50 HOH HOH . M 3 HOH A 7 307 37 HOH HOH . M 3 HOH A 8 308 12 HOH HOH . M 3 HOH A 9 309 5 HOH HOH . M 3 HOH A 10 310 29 HOH HOH . M 3 HOH A 11 311 44 HOH HOH . N 3 HOH B 1 301 45 HOH HOH . N 3 HOH B 2 302 7 HOH HOH . N 3 HOH B 3 303 16 HOH HOH . N 3 HOH B 4 304 18 HOH HOH . N 3 HOH B 5 305 26 HOH HOH . N 3 HOH B 6 306 22 HOH HOH . N 3 HOH B 7 307 42 HOH HOH . N 3 HOH B 8 308 2 HOH HOH . O 3 HOH C 1 301 21 HOH HOH . O 3 HOH C 2 302 40 HOH HOH . O 3 HOH C 3 303 15 HOH HOH . O 3 HOH C 4 304 46 HOH HOH . O 3 HOH C 5 305 41 HOH HOH . O 3 HOH C 6 306 19 HOH HOH . O 3 HOH C 7 307 11 HOH HOH . O 3 HOH C 8 308 30 HOH HOH . O 3 HOH C 9 309 10 HOH HOH . O 3 HOH C 10 310 39 HOH HOH . O 3 HOH C 11 311 8 HOH HOH . O 3 HOH C 12 312 4 HOH HOH . P 3 HOH D 1 301 14 HOH HOH . P 3 HOH D 2 302 23 HOH HOH . P 3 HOH D 3 303 9 HOH HOH . P 3 HOH D 4 304 48 HOH HOH . P 3 HOH D 5 305 3 HOH HOH . P 3 HOH D 6 306 27 HOH HOH . Q 3 HOH E 1 301 33 HOH HOH . Q 3 HOH E 2 302 49 HOH HOH . Q 3 HOH E 3 303 32 HOH HOH . Q 3 HOH E 4 304 36 HOH HOH . Q 3 HOH E 5 305 25 HOH HOH . Q 3 HOH E 6 306 6 HOH HOH . R 3 HOH F 1 301 24 HOH HOH . R 3 HOH F 2 302 34 HOH HOH . R 3 HOH F 3 303 35 HOH HOH . R 3 HOH F 4 304 20 HOH HOH . R 3 HOH F 5 305 28 HOH HOH . R 3 HOH F 6 306 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TOP . . . K 2 13.15 -29.235 16.227 1 24.97 ? C1 TOP 201 E 1 HETATM 2 N N2 TOP . . . K 2 13.876 -28.992 15.125 1 25.68 ? N2 TOP 201 E 1 HETATM 3 C C3 TOP . . . K 2 14.181 -27.7 14.853 1 24.25 ? C3 TOP 201 E 1 HETATM 4 N N4 TOP . . . K 2 14.921 -27.443 13.775 1 23.83 ? N4 TOP 201 E 1 HETATM 5 N N5 TOP . . . K 2 13.794 -26.654 15.599 1 23.56 ? N5 TOP 201 E 1 HETATM 6 C C6 TOP . . . K 2 13.044 -26.92 16.689 1 24.21 ? C6 TOP 201 E 1 HETATM 7 N N7 TOP . . . K 2 12.649 -25.88 17.435 1 24.65 ? N7 TOP 201 E 1 HETATM 8 C C8 TOP . . . K 2 12.696 -28.227 17.061 1 26.25 ? C8 TOP 201 E 1 HETATM 9 C C9 TOP . . . K 2 11.896 -28.473 18.329 1 28.23 ? C9 TOP 201 E 1 HETATM 10 C C10 TOP . . . K 2 11.677 -29.915 18.722 1 30.7 ? C10 TOP 201 E 1 HETATM 11 C C11 TOP . . . K 2 12.751 -30.765 18.966 1 32.79 ? C11 TOP 201 E 1 HETATM 12 C C12 TOP . . . K 2 12.535 -32.098 19.298 1 35.33 ? C12 TOP 201 E 1 HETATM 13 O O13 TOP . . . K 2 13.527 -33.007 19.553 1 38.01 ? O13 TOP 201 E 1 HETATM 14 C C14 TOP . . . K 2 14.829 -32.739 19.034 1 36.86 ? C14 TOP 201 E 1 HETATM 15 C C15 TOP . . . K 2 11.229 -32.587 19.427 1 35.02 ? C15 TOP 201 E 1 HETATM 16 O O16 TOP . . . K 2 10.999 -33.898 19.79 1 36.85 ? O16 TOP 201 E 1 HETATM 17 C C17 TOP . . . K 2 11.179 -34.854 18.747 1 37.62 ? C17 TOP 201 E 1 HETATM 18 C C18 TOP . . . K 2 10.151 -31.728 19.198 1 34.4 ? C18 TOP 201 E 1 HETATM 19 O O19 TOP . . . K 2 8.909 -32.29 19.335 1 36.69 ? O19 TOP 201 E 1 HETATM 20 C C20 TOP . . . K 2 7.767 -31.461 19.113 1 36.44 ? C20 TOP 201 E 1 HETATM 21 C C21 TOP . . . K 2 10.382 -30.402 18.855 1 32.77 ? C21 TOP 201 E 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 21 #