data_7MYM
#
_model_server_result.job_id            s_VpFIRhB5s4piGPokN2Vg 
_model_server_result.datetime_utc      '2024-11-17 23:45:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7mym 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    7MYM 
#
_exptl.entry_id    7MYM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              175.209 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ARGININE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7MYM 
_cell.length_a            65.47 
_cell.length_b            113.397 
_cell.length_c            216.578 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7MYM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,P 1 1 
B,I,J,K,L,Q 2 1 
C,M,N,O,R 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 I N N 
#
_chem_comp.formula           'C6 H15 N4 O2 1' 
_chem_comp.formula_weight    175.209 
_chem_comp.id                ARG 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              ARGININE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ARG sing 13 n n 
N H ARG sing 14 n n 
N H2 ARG sing 15 n n 
CA C ARG sing 16 n n 
CA CB ARG sing 17 n n 
CA HA ARG sing 18 n n 
C O ARG doub 19 n n 
C OXT ARG sing 20 n n 
CB CG ARG sing 21 n n 
CB HB2 ARG sing 22 n n 
CB HB3 ARG sing 23 n n 
CG CD ARG sing 24 n n 
CG HG2 ARG sing 25 n n 
CG HG3 ARG sing 26 n n 
CD NE ARG sing 27 n n 
CD HD2 ARG sing 28 n n 
CD HD3 ARG sing 29 n n 
NE CZ ARG sing 30 n n 
NE HE ARG sing 31 n n 
CZ NH1 ARG sing 32 n n 
CZ NH2 ARG doub 33 n n 
NH1 HH11 ARG sing 34 n n 
NH1 HH12 ARG sing 35 n n 
NH2 HH21 ARG sing 36 n n 
NH2 HH22 ARG sing 37 n n 
OXT HXT ARG sing 38 n n 
#
_atom_sites.entry_id                     7MYM 
_atom_sites.fract_transf_matrix[1][1]    0.015274 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008819 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004617 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ARG A 1 201 159 ARG ARG . 
E 3 NAP A 1 202 201 NAP NAP . 
F 4 TOP A 1 203 301 TOP TOP . 
G 5 SO4 A 1 204 1 SO4 SO4 . 
H 5 SO4 A 1 205 3 SO4 SO4 . 
I 2 ARG C 1 201 159 ARG ARG . 
J 3 NAP C 1 202 201 NAP NAP . 
K 4 TOP C 1 203 301 TOP TOP . 
L 5 SO4 C 1 204 2 SO4 SO4 . 
M 3 NAP B 1 201 201 NAP NAP . 
N 4 TOP B 1 202 301 TOP TOP . 
O 5 SO4 B 1 203 4 SO4 SO4 . 
P 6 HOH A 1 301 12 HOH HOH . 
P 6 HOH A 2 302 10 HOH HOH . 
P 6 HOH A 3 303 13 HOH HOH . 
P 6 HOH A 4 304 4 HOH HOH . 
P 6 HOH A 5 305 3 HOH HOH . 
Q 6 HOH C 1 301 7 HOH HOH . 
Q 6 HOH C 2 302 8 HOH HOH . 
Q 6 HOH C 3 303 6 HOH HOH . 
Q 6 HOH C 4 304 1 HOH HOH . 
R 6 HOH B 1 301 2 HOH HOH . 
R 6 HOH B 2 302 11 HOH HOH . 
R 6 HOH B 3 303 9 HOH HOH . 
R 6 HOH B 4 304 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ARG . . . D 2 5.479 24.585 -37.873 1 73.72 ? N ARG 201 A 1 
HETATM 2 C CA ARG . . . D 2 5.417 26.06 -38.016 1 75.5 ? CA ARG 201 A 1 
HETATM 3 C C ARG . . . D 2 6.273 26.471 -39.219 1 67.45 ? C ARG 201 A 1 
HETATM 4 O O ARG . . . D 2 5.866 26.155 -40.323 1 64.63 ? O ARG 201 A 1 
HETATM 5 C CB ARG . . . D 2 5.902 26.757 -36.738 1 81.5 ? CB ARG 201 A 1 
HETATM 6 C CG ARG . . . D 2 4.952 26.663 -35.55 1 80.75 ? CG ARG 201 A 1 
HETATM 7 C CD ARG . . . D 2 5.32 27.602 -34.41 1 82.82 ? CD ARG 201 A 1 
HETATM 8 N NE ARG . . . D 2 6.338 27.05 -33.514 1 88.23 ? NE ARG 201 A 1 
HETATM 9 C CZ ARG . . . D 2 6.314 27.096 -32.173 1 91.01 ? CZ ARG 201 A 1 
HETATM 10 N NH1 ARG . . . D 2 7.302 26.556 -31.478 1 86.25 ? NH1 ARG 201 A 1 
HETATM 11 N NH2 ARG . . . D 2 5.309 27.663 -31.522 1 91.43 ? NH2 ARG 201 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           11 
#