data_7MYM # _model_server_result.job_id GViJI5W6ZROFzIRnBbkCMw _model_server_result.datetime_utc '2024-11-17 23:27:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mym # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":203}' # _entry.id 7MYM # _exptl.entry_id 7MYM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.318 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIMETHOPRIM _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MYM _cell.length_a 65.47 _cell.length_b 113.397 _cell.length_c 216.578 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,P 1 1 B,I,J,K,L,Q 2 1 C,M,N,O,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 K N N ? 4 N N N # _chem_comp.formula 'C14 H18 N4 O3' _chem_comp.formula_weight 290.318 _chem_comp.id TOP _chem_comp.mon_nstd_flag . _chem_comp.name TRIMETHOPRIM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 TOP doub 390 n y C1 C8 TOP sing 391 n y C1 H1 TOP sing 392 n n N2 C3 TOP sing 393 n y C3 N4 TOP sing 394 n n C3 N5 TOP doub 395 n y N4 HN41 TOP sing 396 n n N4 HN42 TOP sing 397 n n N5 C6 TOP sing 398 n y C6 N7 TOP sing 399 n n C6 C8 TOP doub 400 n y N7 HN71 TOP sing 401 n n N7 HN72 TOP sing 402 n n C8 C9 TOP sing 403 n n C9 C10 TOP sing 404 n n C9 H91 TOP sing 405 n n C9 H92 TOP sing 406 n n C10 C11 TOP doub 407 n y C10 C21 TOP sing 408 n y C11 C12 TOP sing 409 n y C11 H11 TOP sing 410 n n C12 O13 TOP sing 411 n n C12 C15 TOP doub 412 n y O13 C14 TOP sing 413 n n C14 H141 TOP sing 414 n n C14 H142 TOP sing 415 n n C14 H143 TOP sing 416 n n C15 O16 TOP sing 417 n n C15 C18 TOP sing 418 n y O16 C17 TOP sing 419 n n C17 H171 TOP sing 420 n n C17 H172 TOP sing 421 n n C17 H173 TOP sing 422 n n C18 O19 TOP sing 423 n n C18 C21 TOP doub 424 n y O19 C20 TOP sing 425 n n C20 H201 TOP sing 426 n n C20 H202 TOP sing 427 n n C20 H203 TOP sing 428 n n C21 H21 TOP sing 429 n n # _atom_sites.entry_id 7MYM _atom_sites.fract_transf_matrix[1][1] 0.015274 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004617 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ARG A 1 201 159 ARG ARG . E 3 NAP A 1 202 201 NAP NAP . F 4 TOP A 1 203 301 TOP TOP . G 5 SO4 A 1 204 1 SO4 SO4 . H 5 SO4 A 1 205 3 SO4 SO4 . I 2 ARG C 1 201 159 ARG ARG . J 3 NAP C 1 202 201 NAP NAP . K 4 TOP C 1 203 301 TOP TOP . L 5 SO4 C 1 204 2 SO4 SO4 . M 3 NAP B 1 201 201 NAP NAP . N 4 TOP B 1 202 301 TOP TOP . O 5 SO4 B 1 203 4 SO4 SO4 . P 6 HOH A 1 301 12 HOH HOH . P 6 HOH A 2 302 10 HOH HOH . P 6 HOH A 3 303 13 HOH HOH . P 6 HOH A 4 304 4 HOH HOH . P 6 HOH A 5 305 3 HOH HOH . Q 6 HOH C 1 301 7 HOH HOH . Q 6 HOH C 2 302 8 HOH HOH . Q 6 HOH C 3 303 6 HOH HOH . Q 6 HOH C 4 304 1 HOH HOH . R 6 HOH B 1 301 2 HOH HOH . R 6 HOH B 2 302 11 HOH HOH . R 6 HOH B 3 303 9 HOH HOH . R 6 HOH B 4 304 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TOP . . . F 4 2.612 2.255 -29.337 1 50.92 ? C1 TOP 203 A 1 HETATM 2 N N2 TOP . . . F 4 2.531 3.262 -28.454 1 49.74 ? N2 TOP 203 A 1 HETATM 3 C C3 TOP . . . F 4 2.902 4.483 -28.894 1 52.47 ? C3 TOP 203 A 1 HETATM 4 N N4 TOP . . . F 4 2.825 5.504 -28.041 1 55.2 ? N4 TOP 203 A 1 HETATM 5 N N5 TOP . . . F 4 3.341 4.74 -30.139 1 55.22 ? N5 TOP 203 A 1 HETATM 6 C C6 TOP . . . F 4 3.413 3.715 -31.014 1 51.32 ? C6 TOP 203 A 1 HETATM 7 N N7 TOP . . . F 4 3.855 3.996 -32.25 1 51.2 ? N7 TOP 203 A 1 HETATM 8 C C8 TOP . . . F 4 3.051 2.41 -30.643 1 47.62 ? C8 TOP 203 A 1 HETATM 9 C C9 TOP . . . F 4 3.124 1.258 -31.628 1 43.66 ? C9 TOP 203 A 1 HETATM 10 C C10 TOP . . . F 4 3.218 -0.132 -31.037 1 37.66 ? C10 TOP 203 A 1 HETATM 11 C C11 TOP . . . F 4 2.089 -0.77 -30.53 1 33.71 ? C11 TOP 203 A 1 HETATM 12 C C12 TOP . . . F 4 2.183 -2.046 -29.993 1 33.72 ? C12 TOP 203 A 1 HETATM 13 O O13 TOP . . . F 4 1.137 -2.757 -29.464 1 34.41 ? O13 TOP 203 A 1 HETATM 14 C C14 TOP . . . F 4 -0.188 -2.337 -29.787 1 34.46 ? C14 TOP 203 A 1 HETATM 15 C C15 TOP . . . F 4 3.419 -2.695 -29.948 1 34.24 ? C15 TOP 203 A 1 HETATM 16 O O16 TOP . . . F 4 3.497 -3.96 -29.4 1 35.01 ? O16 TOP 203 A 1 HETATM 17 C C17 TOP . . . F 4 3.385 -3.997 -27.978 1 34.33 ? C17 TOP 203 A 1 HETATM 18 C C18 TOP . . . F 4 4.556 -2.058 -30.472 1 34.55 ? C18 TOP 203 A 1 HETATM 19 O O19 TOP . . . F 4 5.732 -2.761 -30.411 1 34.98 ? O19 TOP 203 A 1 HETATM 20 C C20 TOP . . . F 4 6.911 -2.149 -30.929 1 34.42 ? C20 TOP 203 A 1 HETATM 21 C C21 TOP . . . F 4 4.443 -0.788 -31.018 1 35.13 ? C21 TOP 203 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #