data_7MZA # _model_server_result.job_id uFgtrOsRl7p4JwrE9X7j2Q _model_server_result.datetime_utc '2024-10-25 20:27:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mza # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":901}' # _entry.id 7MZA # _exptl.entry_id 7MZA _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 628.708 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description resiniferatoxin _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MZA _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MZA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 282 C CYS 386 1_555 D SG CYS 286 C CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc1 A O GLY 516 A GLY 643 1_555 H NA NA . B NA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc2 B O GLY 516 D GLY 643 1_555 H NA NA . B NA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc3 C O GLY 516 B GLY 643 1_555 H NA NA . B NA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc4 H NA NA . B NA 802 1_555 D O GLY 516 C GLY 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? # _chem_comp.formula 'C37 H40 O9' _chem_comp.formula_weight 628.708 _chem_comp.id 6EU _chem_comp.mon_nstd_flag . _chem_comp.name resiniferatoxin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms RTX # _atom_sites.entry_id 7MZA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 XJ7 A 1 801 801 XJ7 6ER . F 3 6EU D 1 901 901 6EU 6EU . G 2 XJ7 B 1 801 801 XJ7 6ER . H 4 NA B 1 802 1 NA NA . I 3 6EU C 1 901 901 6EU 6EU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBT 6EU . . . I 3 160.185 129.745 124.034 1 105.66 ? CBT 6EU 901 C 1 HETATM 2 O OAH 6EU . . . I 3 159.658 129.505 125.312 1 105.66 ? OAH 6EU 901 C 1 HETATM 3 C CBQ 6EU . . . I 3 158.263 129.6 125.377 1 105.66 ? CBQ 6EU 901 C 1 HETATM 4 C CBO 6EU . . . I 3 157.577 129.805 124.276 1 105.66 ? CBO 6EU 901 C 1 HETATM 5 C CBS 6EU . . . I 3 157.539 129.464 126.703 1 105.66 ? CBS 6EU 901 C 1 HETATM 6 O OAI 6EU . . . I 3 158.26 129.243 127.875 1 105.66 ? OAI 6EU 901 C 1 HETATM 7 C CBR 6EU . . . I 3 156.237 129.549 126.752 1 105.66 ? CBR 6EU 901 C 1 HETATM 8 C CBP 6EU . . . I 3 155.439 129.789 125.477 1 105.66 ? CBP 6EU 901 C 1 HETATM 9 C CBN 6EU . . . I 3 156.059 129.909 124.336 1 105.66 ? CBN 6EU 901 C 1 HETATM 10 C CBM 6EU . . . I 3 155.235 130.138 123.056 1 105.66 ? CBM 6EU 901 C 1 HETATM 11 C CBK 6EU . . . I 3 154.896 128.719 122.545 1 105.66 ? CBK 6EU 901 C 1 HETATM 12 O OAG 6EU . . . I 3 154.756 127.858 123.326 1 105.66 ? OAG 6EU 901 C 1 HETATM 13 O OAF 6EU . . . I 3 154.744 128.424 121.163 1 105.66 ? OAF 6EU 901 C 1 HETATM 14 C CBC 6EU . . . I 3 153.789 127.413 120.885 1 105.66 ? CBC 6EU 901 C 1 HETATM 15 C CAX 6EU . . . I 3 154.425 126.465 119.846 1 105.66 ? CAX 6EU 901 C 1 HETATM 16 C CAS 6EU . . . I 3 154.129 125.186 119.841 1 105.66 ? CAS 6EU 901 C 1 HETATM 17 C CAK 6EU . . . I 3 155.176 124.148 119.64 1 105.66 ? CAK 6EU 901 C 1 HETATM 18 C CAU 6EU . . . I 3 155.013 127.109 118.598 1 105.66 ? CAU 6EU 901 C 1 HETATM 19 C CAR 6EU . . . I 3 155.666 126.062 117.597 1 105.66 ? CAR 6EU 901 C 1 HETATM 20 O OAD 6EU . . . I 3 156.978 125.806 118.007 1 105.66 ? OAD 6EU 901 C 1 HETATM 21 C CAZ 6EU . . . I 3 155.732 126.766 116.351 1 105.66 ? CAZ 6EU 901 C 1 HETATM 22 O OAE 6EU . . . I 3 155.74 127.942 116.262 1 105.66 ? OAE 6EU 901 C 1 HETATM 23 C CBA 6EU . . . I 3 155.727 125.643 115.25 1 105.66 ? CBA 6EU 901 C 1 HETATM 24 C CBF 6EU . . . I 3 155.885 125.911 113.797 1 105.66 ? CBF 6EU 901 C 1 HETATM 25 C CAW 6EU . . . I 3 155.004 124.55 115.811 1 105.66 ? CAW 6EU 901 C 1 HETATM 26 C CAO 6EU . . . I 3 154.84 124.858 117.31 1 105.66 ? CAO 6EU 901 C 1 HETATM 27 C CAJ 6EU . . . I 3 155.334 123.687 118.093 1 105.66 ? CAJ 6EU 901 C 1 HETATM 28 O OAA 6EU . . . I 3 154.344 122.565 117.879 1 105.66 ? OAA 6EU 901 C 1 HETATM 29 C CAN 6EU . . . I 3 156.614 122.92 117.975 1 105.66 ? CAN 6EU 901 C 1 HETATM 30 C CAT 6EU . . . I 3 156.542 121.844 116.938 1 105.66 ? CAT 6EU 901 C 1 HETATM 31 C CAP 6EU . . . I 3 157.065 122.345 119.379 1 105.66 ? CAP 6EU 901 C 1 HETATM 32 C CAM 6EU . . . I 3 155.829 121.852 120.128 1 105.66 ? CAM 6EU 901 C 1 HETATM 33 C CAV 6EU . . . I 3 156.149 121.213 121.484 1 105.66 ? CAV 6EU 901 C 1 HETATM 34 C CBB 6EU . . . I 3 155.149 121.62 122.557 1 105.66 ? CBB 6EU 901 C 1 HETATM 35 C CBD 6EU . . . I 3 157.605 121.305 121.922 1 105.66 ? CBD 6EU 901 C 1 HETATM 36 O OAC 6EU . . . I 3 155.234 121.077 119.448 1 105.66 ? OAC 6EU 901 C 1 HETATM 37 C CAL 6EU . . . I 3 154.822 122.985 120.408 1 105.66 ? CAL 6EU 901 C 1 HETATM 38 O OAB 6EU . . . I 3 153.708 122.575 120.013 1 105.66 ? OAB 6EU 901 C 1 HETATM 39 C CAQ 6EU . . . I 3 154.038 121.801 119.013 1 105.66 ? CAQ 6EU 901 C 1 HETATM 40 C CAY 6EU . . . I 3 152.894 120.829 118.707 1 105.66 ? CAY 6EU 901 C 1 HETATM 41 C CBE 6EU . . . I 3 151.656 121.573 118.203 1 105.66 ? CBE 6EU 901 C 1 HETATM 42 C CBG 6EU . . . I 3 151.533 121.837 116.924 1 105.66 ? CBG 6EU 901 C 1 HETATM 43 C CBI 6EU . . . I 3 150.3 122.565 116.409 1 105.66 ? CBI 6EU 901 C 1 HETATM 44 C CBL 6EU . . . I 3 149.357 122.924 117.246 1 105.66 ? CBL 6EU 901 C 1 HETATM 45 C CBJ 6EU . . . I 3 149.492 122.612 118.727 1 105.66 ? CBJ 6EU 901 C 1 HETATM 46 C CBH 6EU . . . I 3 150.557 121.99 119.172 1 105.66 ? CBH 6EU 901 C 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 46 #