data_7MZM # _model_server_result.job_id KUNNUmE_KyoOepTkiipcSg _model_server_result.datetime_utc '2024-10-12 01:28:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7mzm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 7MZM # _exptl.entry_id 7MZM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.095 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ISOPROPYL ALCOHOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7MZM _cell.length_a 95.801 _cell.length_b 120.325 _cell.length_c 128.358 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MZM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 FUC _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O6 _pdbx_entity_branch_link.leaving_atom_id_2 HO6 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 B 1 NAG A 526 NAG 4 n D FUC 2 B 2 FUC A 527 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 159 H CYS 159 1_555 A SG CYS 215 H CYS 215 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 159 H CYS 159 1_555 A SG CYS 215 H CYS 215 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 A SG CYS 159 H CYS 159 1_555 A SG CYS 215 H CYS 215 1_555 ? C ? ? C ? ? ? ? ? ? ? 2.026 ? disulf ? disulf5 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf6 B SG CYS 136 L CYS 136 1_555 B SG CYS 196 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf7 C SG CYS 6 A CYS 336 1_555 C SG CYS 31 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 C SG CYS 49 A CYS 379 1_555 C SG CYS 102 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf9 C SG CYS 61 A CYS 391 1_555 C SG CYS 195 A CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf10 C SG CYS 150 A CYS 480 1_555 C SG CYS 158 A CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? covale ? covale1 C ND2 ASN 13 A ASN 343 1_555 D C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale2 D O6 NAG . B NAG 1 1_555 D C1 FUC . B FUC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? # _chem_comp.formula 'C3 H8 O' _chem_comp.formula_weight 60.095 _chem_comp.id IPA _chem_comp.mon_nstd_flag . _chem_comp.name 'ISOPROPYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-PROPANOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPA sing 196 n n C1 H11 IPA sing 197 n n C1 H12 IPA sing 198 n n C1 H13 IPA sing 199 n n C2 C3 IPA sing 200 n n C2 O2 IPA sing 201 n n C2 H2 IPA sing 202 n n C3 H31 IPA sing 203 n n C3 H32 IPA sing 204 n n C3 H33 IPA sing 205 n n O2 HO2 IPA sing 206 n n # _atom_sites.entry_id 7MZM _atom_sites.fract_transf_matrix[1][1] 0.010438 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008311 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 IPA A 1 601 528 IPA IPA . F 5 IPA A 1 602 529 IPA IPA . G 6 HOH H 1 301 117 HOH HOH . G 6 HOH H 2 302 73 HOH HOH . G 6 HOH H 3 303 111 HOH HOH . G 6 HOH H 4 304 55 HOH HOH . G 6 HOH H 5 305 33 HOH HOH . G 6 HOH H 6 306 81 HOH HOH . G 6 HOH H 7 307 20 HOH HOH . G 6 HOH H 8 308 56 HOH HOH . G 6 HOH H 9 309 9 HOH HOH . G 6 HOH H 10 310 118 HOH HOH . G 6 HOH H 11 311 59 HOH HOH . G 6 HOH H 12 312 23 HOH HOH . G 6 HOH H 13 313 4 HOH HOH . G 6 HOH H 14 314 84 HOH HOH . G 6 HOH H 15 315 52 HOH HOH . G 6 HOH H 16 316 113 HOH HOH . G 6 HOH H 17 317 103 HOH HOH . G 6 HOH H 18 318 8 HOH HOH . G 6 HOH H 19 319 77 HOH HOH . G 6 HOH H 20 320 30 HOH HOH . G 6 HOH H 21 321 32 HOH HOH . G 6 HOH H 22 322 100 HOH HOH . G 6 HOH H 23 323 78 HOH HOH . G 6 HOH H 24 324 92 HOH HOH . G 6 HOH H 25 325 94 HOH HOH . G 6 HOH H 26 326 26 HOH HOH . G 6 HOH H 27 327 58 HOH HOH . G 6 HOH H 28 328 105 HOH HOH . G 6 HOH H 29 329 95 HOH HOH . G 6 HOH H 30 330 76 HOH HOH . G 6 HOH H 31 331 96 HOH HOH . G 6 HOH H 32 332 115 HOH HOH . G 6 HOH H 33 333 93 HOH HOH . G 6 HOH H 34 334 90 HOH HOH . G 6 HOH H 35 335 89 HOH HOH . G 6 HOH H 36 336 22 HOH HOH . H 6 HOH L 1 301 38 HOH HOH . H 6 HOH L 2 302 1 HOH HOH . H 6 HOH L 3 303 21 HOH HOH . H 6 HOH L 4 304 18 HOH HOH . H 6 HOH L 5 305 2 HOH HOH . H 6 HOH L 6 306 87 HOH HOH . H 6 HOH L 7 307 3 HOH HOH . H 6 HOH L 8 308 45 HOH HOH . H 6 HOH L 9 309 12 HOH HOH . H 6 HOH L 10 310 14 HOH HOH . H 6 HOH L 11 311 35 HOH HOH . H 6 HOH L 12 312 6 HOH HOH . H 6 HOH L 13 313 36 HOH HOH . H 6 HOH L 14 314 60 HOH HOH . H 6 HOH L 15 315 88 HOH HOH . H 6 HOH L 16 316 91 HOH HOH . H 6 HOH L 17 317 28 HOH HOH . H 6 HOH L 18 318 80 HOH HOH . H 6 HOH L 19 319 114 HOH HOH . H 6 HOH L 20 320 121 HOH HOH . H 6 HOH L 21 321 86 HOH HOH . H 6 HOH L 22 322 63 HOH HOH . H 6 HOH L 23 323 99 HOH HOH . H 6 HOH L 24 324 25 HOH HOH . H 6 HOH L 25 325 40 HOH HOH . H 6 HOH L 26 326 11 HOH HOH . H 6 HOH L 27 327 31 HOH HOH . H 6 HOH L 28 328 83 HOH HOH . H 6 HOH L 29 329 49 HOH HOH . H 6 HOH L 30 330 85 HOH HOH . H 6 HOH L 31 331 104 HOH HOH . H 6 HOH L 32 332 37 HOH HOH . H 6 HOH L 33 333 17 HOH HOH . H 6 HOH L 34 334 66 HOH HOH . H 6 HOH L 35 335 72 HOH HOH . H 6 HOH L 36 336 107 HOH HOH . H 6 HOH L 37 337 41 HOH HOH . H 6 HOH L 38 338 57 HOH HOH . H 6 HOH L 39 339 120 HOH HOH . H 6 HOH L 40 340 106 HOH HOH . H 6 HOH L 41 341 98 HOH HOH . I 6 HOH A 1 701 68 HOH HOH . I 6 HOH A 2 702 47 HOH HOH . I 6 HOH A 3 703 51 HOH HOH . I 6 HOH A 4 704 70 HOH HOH . I 6 HOH A 5 705 101 HOH HOH . I 6 HOH A 6 706 16 HOH HOH . I 6 HOH A 7 707 108 HOH HOH . I 6 HOH A 8 708 119 HOH HOH . I 6 HOH A 9 709 42 HOH HOH . I 6 HOH A 10 710 116 HOH HOH . I 6 HOH A 11 711 69 HOH HOH . I 6 HOH A 12 712 75 HOH HOH . I 6 HOH A 13 713 10 HOH HOH . I 6 HOH A 14 714 79 HOH HOH . I 6 HOH A 15 715 34 HOH HOH . I 6 HOH A 16 716 43 HOH HOH . I 6 HOH A 17 717 82 HOH HOH . I 6 HOH A 18 718 7 HOH HOH . I 6 HOH A 19 719 15 HOH HOH . I 6 HOH A 20 720 54 HOH HOH . I 6 HOH A 21 721 71 HOH HOH . I 6 HOH A 22 722 19 HOH HOH . I 6 HOH A 23 723 13 HOH HOH . I 6 HOH A 24 724 74 HOH HOH . I 6 HOH A 25 725 64 HOH HOH . I 6 HOH A 26 726 24 HOH HOH . I 6 HOH A 27 727 109 HOH HOH . I 6 HOH A 28 728 53 HOH HOH . I 6 HOH A 29 729 97 HOH HOH . I 6 HOH A 30 730 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPA . . . E 5 -5.997 -11.7 -50.949 1 70.51 ? C1 IPA 601 A 1 HETATM 2 C C2 IPA . . . E 5 -6.924 -12.304 -49.901 1 56.25 ? C2 IPA 601 A 1 HETATM 3 C C3 IPA . . . E 5 -7.801 -11.204 -49.327 1 53.34 ? C3 IPA 601 A 1 HETATM 4 O O2 IPA . . . E 5 -6.18 -12.925 -48.892 1 59.18 ? O2 IPA 601 A 1 HETATM 5 H H11 IPA . . . E 5 -6.571 -11.467 -51.837 1 84.65 ? H11 IPA 601 A 1 HETATM 6 H H12 IPA . . . E 5 -5.225 -12.415 -51.203 1 84.65 ? H12 IPA 601 A 1 HETATM 7 H H13 IPA . . . E 5 -5.539 -10.793 -50.574 1 84.65 ? H13 IPA 601 A 1 HETATM 8 H H2 IPA . . . E 5 -7.56 -13.037 -50.38 1 67.55 ? H2 IPA 601 A 1 HETATM 9 H H31 IPA . . . E 5 -8.341 -10.74 -50.136 1 64.05 ? H31 IPA 601 A 1 HETATM 10 H H32 IPA . . . E 5 -7.201 -10.457 -48.825 1 64.05 ? H32 IPA 601 A 1 HETATM 11 H H33 IPA . . . E 5 -8.511 -11.628 -48.633 1 64.05 ? H33 IPA 601 A 1 HETATM 12 H HO2 IPA . . . E 5 -5.445 -12.387 -48.651 1 71.05 ? HO2 IPA 601 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 12 #