data_7N2N
#
_model_server_result.job_id            G1iPt6k9uFXQnF4rj1_wdA 
_model_server_result.datetime_utc      '2025-01-05 02:12:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7n2n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":101}' 
#
_entry.id    7N2N 
#
_exptl.entry_id    7N2N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.485 
_cell.angle_gamma         90 
_cell.entry_id            7N2N 
_cell.length_a            83.109 
_cell.length_b            53.154 
_cell.length_c            106.818 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7N2N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 G N N 
? 6 J N N 
? 6 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 101 A CYS 101 1_555 B SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 B SG CYS 203 A CYS 203 1_555 B SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 C SG CYS 26 B CYS 25 1_555 C SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 23 D CYS 24 1_555 D SG CYS 90 D CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 D SG CYS 139 D CYS 140 1_555 D SG CYS 189 D CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf6 D SG CYS 164 D CYS 165 1_555 E SG CYS 169 F CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf7 E SG CYS 21 F CYS 23 1_555 E SG CYS 89 F CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf8 E SG CYS 143 F CYS 145 1_555 E SG CYS 208 F CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
covale ? covale1 D ND2 ASN 22 D ASN 23 1_555 H C1 NAG . D NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale2 D ND2 ASN 149 D ASN 150 1_555 I C1 NAG . D NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale3 E ND2 ASN 75 F ASN 77 1_555 K C1 NAG . F NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7N2N 
_atom_sites.fract_transf_matrix[1][1]    0.012032 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001795 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018813 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009465 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 GOL B 1 101 101 GOL GOL . 
G 6 GOL B 1 102 102 GOL GOL . 
H 7 NAG D 1 301 208 NAG NAG . 
I 7 NAG D 1 302 209 NAG NAG . 
J 6 GOL D 1 303 210 GOL GOL . 
K 7 NAG F 1 301 244 NAG NAG . 
L 6 GOL F 1 302 245 GOL GOL . 
M 8 SO4 F 1 303 1 SO4 SO4 . 
N 9 HOH C 1 101 2 HOH HOH . 
N 9 HOH C 2 102 3 HOH HOH . 
N 9 HOH C 3 103 64 HOH HOH . 
O 9 HOH A 1 301 41 HOH HOH . 
O 9 HOH A 2 302 37 HOH HOH . 
O 9 HOH A 3 303 1 HOH HOH . 
O 9 HOH A 4 304 59 HOH HOH . 
O 9 HOH A 5 305 9 HOH HOH . 
O 9 HOH A 6 306 38 HOH HOH . 
O 9 HOH A 7 307 51 HOH HOH . 
O 9 HOH A 8 308 33 HOH HOH . 
O 9 HOH A 9 309 48 HOH HOH . 
O 9 HOH A 10 310 28 HOH HOH . 
O 9 HOH A 11 311 63 HOH HOH . 
O 9 HOH A 12 312 15 HOH HOH . 
O 9 HOH A 13 313 44 HOH HOH . 
O 9 HOH A 14 314 61 HOH HOH . 
O 9 HOH A 15 315 35 HOH HOH . 
O 9 HOH A 16 316 21 HOH HOH . 
O 9 HOH A 17 317 7 HOH HOH . 
O 9 HOH A 18 318 23 HOH HOH . 
O 9 HOH A 19 319 56 HOH HOH . 
O 9 HOH A 20 320 36 HOH HOH . 
O 9 HOH A 21 321 6 HOH HOH . 
O 9 HOH A 22 322 52 HOH HOH . 
O 9 HOH A 23 323 46 HOH HOH . 
O 9 HOH A 24 324 66 HOH HOH . 
O 9 HOH A 25 325 4 HOH HOH . 
O 9 HOH A 26 326 65 HOH HOH . 
P 9 HOH B 1 201 25 HOH HOH . 
P 9 HOH B 2 202 42 HOH HOH . 
P 9 HOH B 3 203 34 HOH HOH . 
P 9 HOH B 4 204 58 HOH HOH . 
P 9 HOH B 5 205 54 HOH HOH . 
P 9 HOH B 6 206 60 HOH HOH . 
P 9 HOH B 7 207 67 HOH HOH . 
P 9 HOH B 8 208 62 HOH HOH . 
P 9 HOH B 9 209 57 HOH HOH . 
P 9 HOH B 10 210 43 HOH HOH . 
P 9 HOH B 11 211 68 HOH HOH . 
P 9 HOH B 12 212 69 HOH HOH . 
Q 9 HOH D 1 401 26 HOH HOH . 
Q 9 HOH D 2 402 20 HOH HOH . 
Q 9 HOH D 3 403 71 HOH HOH . 
Q 9 HOH D 4 404 22 HOH HOH . 
Q 9 HOH D 5 405 50 HOH HOH . 
Q 9 HOH D 6 406 53 HOH HOH . 
Q 9 HOH D 7 407 49 HOH HOH . 
Q 9 HOH D 8 408 13 HOH HOH . 
Q 9 HOH D 9 409 12 HOH HOH . 
Q 9 HOH D 10 410 29 HOH HOH . 
Q 9 HOH D 11 411 39 HOH HOH . 
R 9 HOH F 1 401 17 HOH HOH . 
R 9 HOH F 2 402 19 HOH HOH . 
R 9 HOH F 3 403 45 HOH HOH . 
R 9 HOH F 4 404 10 HOH HOH . 
R 9 HOH F 5 405 16 HOH HOH . 
R 9 HOH F 6 406 70 HOH HOH . 
R 9 HOH F 7 407 47 HOH HOH . 
R 9 HOH F 8 408 8 HOH HOH . 
R 9 HOH F 9 409 40 HOH HOH . 
R 9 HOH F 10 410 11 HOH HOH . 
R 9 HOH F 11 411 30 HOH HOH . 
R 9 HOH F 12 412 18 HOH HOH . 
R 9 HOH F 13 413 55 HOH HOH . 
R 9 HOH F 14 414 14 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 6 1.402 -24.201 -16.122 1 29.41 ? C1 GOL 101 B 1 
HETATM 2 O O1 GOL . . . F 6 0.528 -23.181 -15.766 1 29.32 ? O1 GOL 101 B 1 
HETATM 3 C C2 GOL . . . F 6 0.63 -25.527 -15.963 1 38.53 ? C2 GOL 101 B 1 
HETATM 4 O O2 GOL . . . F 6 0.071 -25.647 -14.7 1 44.2 ? O2 GOL 101 B 1 
HETATM 5 C C3 GOL . . . F 6 -0.438 -25.509 -17.086 1 47.88 ? C3 GOL 101 B 1 
HETATM 6 O O3 GOL . . . F 6 -0.961 -26.799 -17.164 1 48.25 ? O3 GOL 101 B 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#