data_7N3S # _model_server_result.job_id s49JuqF8jTZtXgd4goWfUg _model_server_result.datetime_utc '2024-11-15 14:19:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7n3s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7N3S # _exptl.entry_id 7N3S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.031 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-PHOSPHOGLYCOLIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7N3S _cell.length_a 52.643 _cell.length_b 70.808 _cell.length_c 158.933 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7N3S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C2 H5 O6 P' _chem_comp.formula_weight 156.031 _chem_comp.id PGA _chem_comp.mon_nstd_flag . _chem_comp.name '2-PHOSPHOGLYCOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P PGA sing 237 n n P O2P PGA doub 238 n n P O3P PGA sing 239 n n P O4P PGA sing 240 n n O1P C2 PGA sing 241 n n O3P HOP3 PGA sing 242 n n O4P HOP4 PGA sing 243 n n C2 C1 PGA sing 244 n n C2 H21 PGA sing 245 n n C2 H22 PGA sing 246 n n C1 O1 PGA doub 247 n n C1 O2 PGA sing 248 n n O2 HO2 PGA sing 249 n n # _atom_sites.entry_id 7N3S _atom_sites.fract_transf_matrix[1][1] 0.018996 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006292 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGA A 1 301 408 PGA PGA . D 2 PGA A 1 302 408 PGA PGA . E 2 PGA B 1 301 408 PGA PGA . F 3 HOH A 1 401 30 HOH HOH . F 3 HOH A 2 402 38 HOH HOH . F 3 HOH A 3 403 15 HOH HOH . F 3 HOH A 4 404 89 HOH HOH . F 3 HOH A 5 405 9 HOH HOH . F 3 HOH A 6 406 55 HOH HOH . F 3 HOH A 7 407 94 HOH HOH . F 3 HOH A 8 408 87 HOH HOH . F 3 HOH A 9 409 43 HOH HOH . F 3 HOH A 10 410 62 HOH HOH . F 3 HOH A 11 411 85 HOH HOH . F 3 HOH A 12 412 10 HOH HOH . F 3 HOH A 13 413 25 HOH HOH . F 3 HOH A 14 414 72 HOH HOH . F 3 HOH A 15 415 14 HOH HOH . F 3 HOH A 16 416 60 HOH HOH . F 3 HOH A 17 417 86 HOH HOH . F 3 HOH A 18 418 39 HOH HOH . F 3 HOH A 19 419 84 HOH HOH . F 3 HOH A 20 420 56 HOH HOH . F 3 HOH A 21 421 29 HOH HOH . F 3 HOH A 22 422 6 HOH HOH . F 3 HOH A 23 423 106 HOH HOH . F 3 HOH A 24 424 4 HOH HOH . F 3 HOH A 25 425 17 HOH HOH . F 3 HOH A 26 426 82 HOH HOH . F 3 HOH A 27 427 33 HOH HOH . F 3 HOH A 28 428 35 HOH HOH . F 3 HOH A 29 429 69 HOH HOH . F 3 HOH A 30 430 16 HOH HOH . F 3 HOH A 31 431 2 HOH HOH . F 3 HOH A 32 432 27 HOH HOH . F 3 HOH A 33 433 5 HOH HOH . F 3 HOH A 34 434 79 HOH HOH . F 3 HOH A 35 435 107 HOH HOH . F 3 HOH A 36 436 46 HOH HOH . F 3 HOH A 37 437 47 HOH HOH . F 3 HOH A 38 438 40 HOH HOH . F 3 HOH A 39 439 7 HOH HOH . F 3 HOH A 40 440 109 HOH HOH . F 3 HOH A 41 441 8 HOH HOH . F 3 HOH A 42 442 70 HOH HOH . F 3 HOH A 43 443 11 HOH HOH . F 3 HOH A 44 444 36 HOH HOH . F 3 HOH A 45 445 19 HOH HOH . F 3 HOH A 46 446 58 HOH HOH . F 3 HOH A 47 447 21 HOH HOH . F 3 HOH A 48 448 95 HOH HOH . F 3 HOH A 49 449 22 HOH HOH . F 3 HOH A 50 450 67 HOH HOH . F 3 HOH A 51 451 77 HOH HOH . F 3 HOH A 52 452 68 HOH HOH . F 3 HOH A 53 453 65 HOH HOH . F 3 HOH A 54 454 98 HOH HOH . F 3 HOH A 55 455 44 HOH HOH . F 3 HOH A 56 456 45 HOH HOH . F 3 HOH A 57 457 59 HOH HOH . F 3 HOH A 58 458 80 HOH HOH . F 3 HOH A 59 459 63 HOH HOH . F 3 HOH A 60 460 50 HOH HOH . F 3 HOH A 61 461 115 HOH HOH . F 3 HOH A 62 462 26 HOH HOH . F 3 HOH A 63 463 91 HOH HOH . F 3 HOH A 64 464 83 HOH HOH . F 3 HOH A 65 465 52 HOH HOH . F 3 HOH A 66 466 71 HOH HOH . F 3 HOH A 67 467 96 HOH HOH . F 3 HOH A 68 468 54 HOH HOH . F 3 HOH A 69 469 31 HOH HOH . F 3 HOH A 70 470 90 HOH HOH . F 3 HOH A 71 471 32 HOH HOH . F 3 HOH A 72 472 105 HOH HOH . F 3 HOH A 73 473 113 HOH HOH . F 3 HOH A 74 474 120 HOH HOH . F 3 HOH A 75 475 117 HOH HOH . F 3 HOH A 76 476 102 HOH HOH . F 3 HOH A 77 477 103 HOH HOH . F 3 HOH A 78 478 66 HOH HOH . F 3 HOH A 79 479 100 HOH HOH . F 3 HOH A 80 480 104 HOH HOH . F 3 HOH A 81 481 132 HOH HOH . G 3 HOH B 1 401 24 HOH HOH . G 3 HOH B 2 402 88 HOH HOH . G 3 HOH B 3 403 23 HOH HOH . G 3 HOH B 4 404 13 HOH HOH . G 3 HOH B 5 405 61 HOH HOH . G 3 HOH B 6 406 57 HOH HOH . G 3 HOH B 7 407 20 HOH HOH . G 3 HOH B 8 408 81 HOH HOH . G 3 HOH B 9 409 49 HOH HOH . G 3 HOH B 10 410 41 HOH HOH . G 3 HOH B 11 411 3 HOH HOH . G 3 HOH B 12 412 51 HOH HOH . G 3 HOH B 13 413 12 HOH HOH . G 3 HOH B 14 414 74 HOH HOH . G 3 HOH B 15 415 129 HOH HOH . G 3 HOH B 16 416 101 HOH HOH . G 3 HOH B 17 417 73 HOH HOH . G 3 HOH B 18 418 64 HOH HOH . G 3 HOH B 19 419 93 HOH HOH . G 3 HOH B 20 420 28 HOH HOH . G 3 HOH B 21 421 34 HOH HOH . G 3 HOH B 22 422 122 HOH HOH . G 3 HOH B 23 423 126 HOH HOH . G 3 HOH B 24 424 53 HOH HOH . G 3 HOH B 25 425 111 HOH HOH . G 3 HOH B 26 426 119 HOH HOH . G 3 HOH B 27 427 48 HOH HOH . G 3 HOH B 28 428 75 HOH HOH . G 3 HOH B 29 429 130 HOH HOH . G 3 HOH B 30 430 131 HOH HOH . G 3 HOH B 31 431 124 HOH HOH . G 3 HOH B 32 432 133 HOH HOH . G 3 HOH B 33 433 127 HOH HOH . G 3 HOH B 34 434 125 HOH HOH . G 3 HOH B 35 435 134 HOH HOH . G 3 HOH B 36 436 112 HOH HOH . G 3 HOH B 37 437 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PGA . . . C 2 -8.962 1.276 16.979 1 39.66 ? P PGA 301 A 1 HETATM 2 O O1P PGA . . . C 2 -9.916 2.422 16.374 1 44.44 ? O1P PGA 301 A 1 HETATM 3 O O2P PGA . . . C 2 -7.866 0.923 16.002 1 43.57 ? O2P PGA 301 A 1 HETATM 4 O O3P PGA . . . C 2 -8.316 1.684 18.283 1 42.41 ? O3P PGA 301 A 1 HETATM 5 O O4P PGA . . . C 2 -9.858 0.077 17.245 1 41.75 ? O4P PGA 301 A 1 HETATM 6 C C2 PGA . . . C 2 -10.516 2.246 15.103 1 43.91 ? C2 PGA 301 A 1 HETATM 7 C C1 PGA . . . C 2 -11.052 3.56 14.566 1 43.37 ? C1 PGA 301 A 1 HETATM 8 O O1 PGA . . . C 2 -12.022 3.577 13.778 1 38.49 ? O1 PGA 301 A 1 HETATM 9 O O2 PGA . . . C 2 -10.54 4.646 14.903 1 42.77 ? O2 PGA 301 A 1 # _model_server_stats.io_time_ms 106 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 9 #