data_7N5M # _model_server_result.job_id vRlei9FY3TAmgJGU16gXcA _model_server_result.datetime_utc '2024-10-20 05:35:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7n5m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":307}' # _entry.id 7N5M # _exptl.entry_id 7N5M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7N5M _cell.length_a 92.616 _cell.length_b 92.616 _cell.length_c 63.73 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7N5M _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,S 1 1,2,4 B,L,M,N,O,P,Q,R,T 2 1,3,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 46.308 80.207809 0 4 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 5 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -46.308 80.207809 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 P N N ? 3 Q N N ? 3 R N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 7N5M _atom_sites.fract_transf_matrix[1][1] 0.010797 _atom_sites.fract_transf_matrix[1][2] 0.006234 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012468 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 301 1 GOL GOL . D 2 GOL A 1 302 3 GOL GOL . E 2 GOL A 1 303 5 GOL GOL . F 2 GOL A 1 304 8 GOL GOL . G 3 SO4 A 1 305 1 SO4 SO4 . H 3 SO4 A 1 306 2 SO4 SO4 . I 3 SO4 A 1 307 4 SO4 SO4 . J 3 SO4 A 1 308 6 SO4 SO4 . K 3 SO4 A 1 309 8 SO4 SO4 . L 2 GOL B 1 301 2 GOL GOL . M 2 GOL B 1 302 4 GOL GOL . N 2 GOL B 1 303 6 GOL GOL . O 2 GOL B 1 304 7 GOL GOL . P 3 SO4 B 1 305 3 SO4 SO4 . Q 3 SO4 B 1 306 5 SO4 SO4 . R 3 SO4 B 1 307 7 SO4 SO4 . S 4 HOH A 1 401 114 HOH HOH . S 4 HOH A 2 402 107 HOH HOH . S 4 HOH A 3 403 115 HOH HOH . S 4 HOH A 4 404 54 HOH HOH . S 4 HOH A 5 405 28 HOH HOH . S 4 HOH A 6 406 22 HOH HOH . S 4 HOH A 7 407 100 HOH HOH . S 4 HOH A 8 408 105 HOH HOH . S 4 HOH A 9 409 64 HOH HOH . S 4 HOH A 10 410 88 HOH HOH . S 4 HOH A 11 411 95 HOH HOH . S 4 HOH A 12 412 98 HOH HOH . S 4 HOH A 13 413 33 HOH HOH . S 4 HOH A 14 414 125 HOH HOH . S 4 HOH A 15 415 9 HOH HOH . S 4 HOH A 16 416 42 HOH HOH . S 4 HOH A 17 417 7 HOH HOH . S 4 HOH A 18 418 51 HOH HOH . S 4 HOH A 19 419 48 HOH HOH . S 4 HOH A 20 420 80 HOH HOH . S 4 HOH A 21 421 69 HOH HOH . S 4 HOH A 22 422 38 HOH HOH . S 4 HOH A 23 423 110 HOH HOH . S 4 HOH A 24 424 81 HOH HOH . S 4 HOH A 25 425 45 HOH HOH . S 4 HOH A 26 426 96 HOH HOH . S 4 HOH A 27 427 1 HOH HOH . S 4 HOH A 28 428 121 HOH HOH . S 4 HOH A 29 429 101 HOH HOH . S 4 HOH A 30 430 10 HOH HOH . S 4 HOH A 31 431 2 HOH HOH . S 4 HOH A 32 432 120 HOH HOH . S 4 HOH A 33 433 75 HOH HOH . S 4 HOH A 34 434 122 HOH HOH . S 4 HOH A 35 435 17 HOH HOH . S 4 HOH A 36 436 111 HOH HOH . S 4 HOH A 37 437 4 HOH HOH . S 4 HOH A 38 438 8 HOH HOH . S 4 HOH A 39 439 21 HOH HOH . S 4 HOH A 40 440 41 HOH HOH . S 4 HOH A 41 441 79 HOH HOH . S 4 HOH A 42 442 92 HOH HOH . S 4 HOH A 43 443 3 HOH HOH . S 4 HOH A 44 444 31 HOH HOH . S 4 HOH A 45 445 18 HOH HOH . S 4 HOH A 46 446 58 HOH HOH . S 4 HOH A 47 447 12 HOH HOH . S 4 HOH A 48 448 123 HOH HOH . S 4 HOH A 49 449 67 HOH HOH . S 4 HOH A 50 450 91 HOH HOH . S 4 HOH A 51 451 78 HOH HOH . S 4 HOH A 52 452 32 HOH HOH . S 4 HOH A 53 453 47 HOH HOH . S 4 HOH A 54 454 102 HOH HOH . S 4 HOH A 55 455 30 HOH HOH . S 4 HOH A 56 456 83 HOH HOH . S 4 HOH A 57 457 86 HOH HOH . S 4 HOH A 58 458 61 HOH HOH . S 4 HOH A 59 459 6 HOH HOH . S 4 HOH A 60 460 57 HOH HOH . S 4 HOH A 61 461 34 HOH HOH . S 4 HOH A 62 462 87 HOH HOH . S 4 HOH A 63 463 55 HOH HOH . S 4 HOH A 64 464 119 HOH HOH . S 4 HOH A 65 465 84 HOH HOH . S 4 HOH A 66 466 62 HOH HOH . S 4 HOH A 67 467 97 HOH HOH . S 4 HOH A 68 468 56 HOH HOH . S 4 HOH A 69 469 74 HOH HOH . S 4 HOH A 70 470 77 HOH HOH . S 4 HOH A 71 471 109 HOH HOH . S 4 HOH A 72 472 40 HOH HOH . S 4 HOH A 73 473 89 HOH HOH . S 4 HOH A 74 474 124 HOH HOH . S 4 HOH A 75 475 72 HOH HOH . T 4 HOH B 1 401 108 HOH HOH . T 4 HOH B 2 402 103 HOH HOH . T 4 HOH B 3 403 13 HOH HOH . T 4 HOH B 4 404 16 HOH HOH . T 4 HOH B 5 405 24 HOH HOH . T 4 HOH B 6 406 63 HOH HOH . T 4 HOH B 7 407 23 HOH HOH . T 4 HOH B 8 408 29 HOH HOH . T 4 HOH B 9 409 52 HOH HOH . T 4 HOH B 10 410 36 HOH HOH . T 4 HOH B 11 411 11 HOH HOH . T 4 HOH B 12 412 44 HOH HOH . T 4 HOH B 13 413 19 HOH HOH . T 4 HOH B 14 414 5 HOH HOH . T 4 HOH B 15 415 65 HOH HOH . T 4 HOH B 16 416 26 HOH HOH . T 4 HOH B 17 417 59 HOH HOH . T 4 HOH B 18 418 73 HOH HOH . T 4 HOH B 19 419 15 HOH HOH . T 4 HOH B 20 420 43 HOH HOH . T 4 HOH B 21 421 70 HOH HOH . T 4 HOH B 22 422 106 HOH HOH . T 4 HOH B 23 423 53 HOH HOH . T 4 HOH B 24 424 82 HOH HOH . T 4 HOH B 25 425 50 HOH HOH . T 4 HOH B 26 426 27 HOH HOH . T 4 HOH B 27 427 71 HOH HOH . T 4 HOH B 28 428 25 HOH HOH . T 4 HOH B 29 429 46 HOH HOH . T 4 HOH B 30 430 35 HOH HOH . T 4 HOH B 31 431 68 HOH HOH . T 4 HOH B 32 432 49 HOH HOH . T 4 HOH B 33 433 14 HOH HOH . T 4 HOH B 34 434 60 HOH HOH . T 4 HOH B 35 435 104 HOH HOH . T 4 HOH B 36 436 99 HOH HOH . T 4 HOH B 37 437 37 HOH HOH . T 4 HOH B 38 438 112 HOH HOH . T 4 HOH B 39 439 20 HOH HOH . T 4 HOH B 40 440 116 HOH HOH . T 4 HOH B 41 441 90 HOH HOH . T 4 HOH B 42 442 113 HOH HOH . T 4 HOH B 43 443 76 HOH HOH . T 4 HOH B 44 444 66 HOH HOH . T 4 HOH B 45 445 94 HOH HOH . T 4 HOH B 46 446 117 HOH HOH . T 4 HOH B 47 447 39 HOH HOH . T 4 HOH B 48 448 118 HOH HOH . T 4 HOH B 49 449 85 HOH HOH . T 4 HOH B 50 450 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . R 3 -10.402 20.24 -21.262 1 94.23 ? S SO4 307 B 1 HETATM 2 O O1 SO4 . . . R 3 -9.573 19.285 -22.006 1 75.3 ? O1 SO4 307 B 1 HETATM 3 O O2 SO4 . . . R 3 -11.395 20.846 -22.157 1 69.65 ? O2 SO4 307 B 1 HETATM 4 O O3 SO4 . . . R 3 -11.078 19.535 -20.175 1 85.62 ? O3 SO4 307 B 1 HETATM 5 O O4 SO4 . . . R 3 -9.564 21.295 -20.691 1 72.33 ? O4 SO4 307 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #