data_7N5O # _model_server_result.job_id O5XU1tnWdq4a_DGgUFXP4A _model_server_result.datetime_utc '2024-10-10 06:29:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7n5o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":704}' # _entry.id 7N5O # _exptl.entry_id 7N5O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7N5O _cell.length_a 72.662 _cell.length_b 104.599 _cell.length_c 38.034 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7N5O _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 107 n n C1 C2 EDO sing 108 n n C1 H11 EDO sing 109 n n C1 H12 EDO sing 110 n n O1 HO1 EDO sing 111 n n C2 O2 EDO sing 112 n n C2 H21 EDO sing 113 n n C2 H22 EDO sing 114 n n O2 HO2 EDO sing 115 n n # _atom_sites.entry_id 7N5O _atom_sites.fract_transf_matrix[1][1] 0.013762 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00956 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026292 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 701 670 IMD IMD . C 3 PGO A 1 702 690 PGO PGO . D 4 0BQ A 1 703 700 0BQ LIG . E 5 EDO A 1 704 701 EDO EDO . F 6 HOH A 1 801 220 HOH HOH . F 6 HOH A 2 802 255 HOH HOH . F 6 HOH A 3 803 231 HOH HOH . F 6 HOH A 4 804 187 HOH HOH . F 6 HOH A 5 805 50 HOH HOH . F 6 HOH A 6 806 171 HOH HOH . F 6 HOH A 7 807 194 HOH HOH . F 6 HOH A 8 808 201 HOH HOH . F 6 HOH A 9 809 267 HOH HOH . F 6 HOH A 10 810 61 HOH HOH . F 6 HOH A 11 811 284 HOH HOH . F 6 HOH A 12 812 150 HOH HOH . F 6 HOH A 13 813 253 HOH HOH . F 6 HOH A 14 814 230 HOH HOH . F 6 HOH A 15 815 51 HOH HOH . F 6 HOH A 16 816 190 HOH HOH . F 6 HOH A 17 817 103 HOH HOH . F 6 HOH A 18 818 205 HOH HOH . F 6 HOH A 19 819 180 HOH HOH . F 6 HOH A 20 820 11 HOH HOH . F 6 HOH A 21 821 209 HOH HOH . F 6 HOH A 22 822 237 HOH HOH . F 6 HOH A 23 823 287 HOH HOH . F 6 HOH A 24 824 192 HOH HOH . F 6 HOH A 25 825 271 HOH HOH . F 6 HOH A 26 826 280 HOH HOH . F 6 HOH A 27 827 124 HOH HOH . F 6 HOH A 28 828 81 HOH HOH . F 6 HOH A 29 829 172 HOH HOH . F 6 HOH A 30 830 148 HOH HOH . F 6 HOH A 31 831 146 HOH HOH . F 6 HOH A 32 832 6 HOH HOH . F 6 HOH A 33 833 128 HOH HOH . F 6 HOH A 34 834 33 HOH HOH . F 6 HOH A 35 835 251 HOH HOH . F 6 HOH A 36 836 59 HOH HOH . F 6 HOH A 37 837 174 HOH HOH . F 6 HOH A 38 838 85 HOH HOH . F 6 HOH A 39 839 22 HOH HOH . F 6 HOH A 40 840 21 HOH HOH . F 6 HOH A 41 841 262 HOH HOH . F 6 HOH A 42 842 63 HOH HOH . F 6 HOH A 43 843 223 HOH HOH . F 6 HOH A 44 844 75 HOH HOH . F 6 HOH A 45 845 119 HOH HOH . F 6 HOH A 46 846 71 HOH HOH . F 6 HOH A 47 847 236 HOH HOH . F 6 HOH A 48 848 200 HOH HOH . F 6 HOH A 49 849 37 HOH HOH . F 6 HOH A 50 850 105 HOH HOH . F 6 HOH A 51 851 218 HOH HOH . F 6 HOH A 52 852 52 HOH HOH . F 6 HOH A 53 853 15 HOH HOH . F 6 HOH A 54 854 242 HOH HOH . F 6 HOH A 55 855 17 HOH HOH . F 6 HOH A 56 856 34 HOH HOH . F 6 HOH A 57 857 18 HOH HOH . F 6 HOH A 58 858 31 HOH HOH . F 6 HOH A 59 859 24 HOH HOH . F 6 HOH A 60 860 4 HOH HOH . F 6 HOH A 61 861 229 HOH HOH . F 6 HOH A 62 862 27 HOH HOH . F 6 HOH A 63 863 182 HOH HOH . F 6 HOH A 64 864 101 HOH HOH . F 6 HOH A 65 865 298 HOH HOH . F 6 HOH A 66 866 98 HOH HOH . F 6 HOH A 67 867 127 HOH HOH . F 6 HOH A 68 868 250 HOH HOH . F 6 HOH A 69 869 7 HOH HOH . F 6 HOH A 70 870 130 HOH HOH . F 6 HOH A 71 871 278 HOH HOH . F 6 HOH A 72 872 167 HOH HOH . F 6 HOH A 73 873 156 HOH HOH . F 6 HOH A 74 874 165 HOH HOH . F 6 HOH A 75 875 60 HOH HOH . F 6 HOH A 76 876 110 HOH HOH . F 6 HOH A 77 877 86 HOH HOH . F 6 HOH A 78 878 89 HOH HOH . F 6 HOH A 79 879 246 HOH HOH . F 6 HOH A 80 880 193 HOH HOH . F 6 HOH A 81 881 113 HOH HOH . F 6 HOH A 82 882 163 HOH HOH . F 6 HOH A 83 883 285 HOH HOH . F 6 HOH A 84 884 228 HOH HOH . F 6 HOH A 85 885 10 HOH HOH . F 6 HOH A 86 886 83 HOH HOH . F 6 HOH A 87 887 69 HOH HOH . F 6 HOH A 88 888 152 HOH HOH . F 6 HOH A 89 889 82 HOH HOH . F 6 HOH A 90 890 91 HOH HOH . F 6 HOH A 91 891 175 HOH HOH . F 6 HOH A 92 892 67 HOH HOH . F 6 HOH A 93 893 125 HOH HOH . F 6 HOH A 94 894 5 HOH HOH . F 6 HOH A 95 895 145 HOH HOH . F 6 HOH A 96 896 13 HOH HOH . F 6 HOH A 97 897 102 HOH HOH . F 6 HOH A 98 898 9 HOH HOH . F 6 HOH A 99 899 8 HOH HOH . F 6 HOH A 100 900 73 HOH HOH . F 6 HOH A 101 901 41 HOH HOH . F 6 HOH A 102 902 137 HOH HOH . F 6 HOH A 103 903 106 HOH HOH . F 6 HOH A 104 904 257 HOH HOH . F 6 HOH A 105 905 56 HOH HOH . F 6 HOH A 106 906 58 HOH HOH . F 6 HOH A 107 907 227 HOH HOH . F 6 HOH A 108 908 277 HOH HOH . F 6 HOH A 109 909 93 HOH HOH . F 6 HOH A 110 910 1 HOH HOH . F 6 HOH A 111 911 54 HOH HOH . F 6 HOH A 112 912 35 HOH HOH . F 6 HOH A 113 913 100 HOH HOH . F 6 HOH A 114 914 12 HOH HOH . F 6 HOH A 115 915 40 HOH HOH . F 6 HOH A 116 916 139 HOH HOH . F 6 HOH A 117 917 129 HOH HOH . F 6 HOH A 118 918 159 HOH HOH . F 6 HOH A 119 919 76 HOH HOH . F 6 HOH A 120 920 151 HOH HOH . F 6 HOH A 121 921 202 HOH HOH . F 6 HOH A 122 922 46 HOH HOH . F 6 HOH A 123 923 120 HOH HOH . F 6 HOH A 124 924 176 HOH HOH . F 6 HOH A 125 925 47 HOH HOH . F 6 HOH A 126 926 158 HOH HOH . F 6 HOH A 127 927 26 HOH HOH . F 6 HOH A 128 928 66 HOH HOH . F 6 HOH A 129 929 173 HOH HOH . F 6 HOH A 130 930 48 HOH HOH . F 6 HOH A 131 931 57 HOH HOH . F 6 HOH A 132 932 147 HOH HOH . F 6 HOH A 133 933 295 HOH HOH . F 6 HOH A 134 934 178 HOH HOH . F 6 HOH A 135 935 16 HOH HOH . F 6 HOH A 136 936 221 HOH HOH . F 6 HOH A 137 937 29 HOH HOH . F 6 HOH A 138 938 204 HOH HOH . F 6 HOH A 139 939 188 HOH HOH . F 6 HOH A 140 940 88 HOH HOH . F 6 HOH A 141 941 39 HOH HOH . F 6 HOH A 142 942 114 HOH HOH . F 6 HOH A 143 943 19 HOH HOH . F 6 HOH A 144 944 136 HOH HOH . F 6 HOH A 145 945 3 HOH HOH . F 6 HOH A 146 946 154 HOH HOH . F 6 HOH A 147 947 28 HOH HOH . F 6 HOH A 148 948 23 HOH HOH . F 6 HOH A 149 949 38 HOH HOH . F 6 HOH A 150 950 292 HOH HOH . F 6 HOH A 151 951 79 HOH HOH . F 6 HOH A 152 952 43 HOH HOH . F 6 HOH A 153 953 115 HOH HOH . F 6 HOH A 154 954 20 HOH HOH . F 6 HOH A 155 955 30 HOH HOH . F 6 HOH A 156 956 92 HOH HOH . F 6 HOH A 157 957 68 HOH HOH . F 6 HOH A 158 958 135 HOH HOH . F 6 HOH A 159 959 2 HOH HOH . F 6 HOH A 160 960 286 HOH HOH . F 6 HOH A 161 961 183 HOH HOH . F 6 HOH A 162 962 14 HOH HOH . F 6 HOH A 163 963 70 HOH HOH . F 6 HOH A 164 964 74 HOH HOH . F 6 HOH A 165 965 252 HOH HOH . F 6 HOH A 166 966 25 HOH HOH . F 6 HOH A 167 967 53 HOH HOH . F 6 HOH A 168 968 131 HOH HOH . F 6 HOH A 169 969 65 HOH HOH . F 6 HOH A 170 970 77 HOH HOH . F 6 HOH A 171 971 121 HOH HOH . F 6 HOH A 172 972 181 HOH HOH . F 6 HOH A 173 973 184 HOH HOH . F 6 HOH A 174 974 94 HOH HOH . F 6 HOH A 175 975 42 HOH HOH . F 6 HOH A 176 976 80 HOH HOH . F 6 HOH A 177 977 141 HOH HOH . F 6 HOH A 178 978 283 HOH HOH . F 6 HOH A 179 979 134 HOH HOH . F 6 HOH A 180 980 279 HOH HOH . F 6 HOH A 181 981 49 HOH HOH . F 6 HOH A 182 982 216 HOH HOH . F 6 HOH A 183 983 112 HOH HOH . F 6 HOH A 184 984 270 HOH HOH . F 6 HOH A 185 985 268 HOH HOH . F 6 HOH A 186 986 189 HOH HOH . F 6 HOH A 187 987 117 HOH HOH . F 6 HOH A 188 988 72 HOH HOH . F 6 HOH A 189 989 78 HOH HOH . F 6 HOH A 190 990 55 HOH HOH . F 6 HOH A 191 991 214 HOH HOH . F 6 HOH A 192 992 166 HOH HOH . F 6 HOH A 193 993 109 HOH HOH . F 6 HOH A 194 994 222 HOH HOH . F 6 HOH A 195 995 215 HOH HOH . F 6 HOH A 196 996 224 HOH HOH . F 6 HOH A 197 997 297 HOH HOH . F 6 HOH A 198 998 140 HOH HOH . F 6 HOH A 199 999 87 HOH HOH . F 6 HOH A 200 1000 291 HOH HOH . F 6 HOH A 201 1001 207 HOH HOH . F 6 HOH A 202 1002 138 HOH HOH . F 6 HOH A 203 1003 126 HOH HOH . F 6 HOH A 204 1004 225 HOH HOH . F 6 HOH A 205 1005 186 HOH HOH . F 6 HOH A 206 1006 197 HOH HOH . F 6 HOH A 207 1007 111 HOH HOH . F 6 HOH A 208 1008 44 HOH HOH . F 6 HOH A 209 1009 96 HOH HOH . F 6 HOH A 210 1010 185 HOH HOH . F 6 HOH A 211 1011 274 HOH HOH . F 6 HOH A 212 1012 177 HOH HOH . F 6 HOH A 213 1013 179 HOH HOH . F 6 HOH A 214 1014 64 HOH HOH . F 6 HOH A 215 1015 62 HOH HOH . F 6 HOH A 216 1016 290 HOH HOH . F 6 HOH A 217 1017 32 HOH HOH . F 6 HOH A 218 1018 243 HOH HOH . F 6 HOH A 219 1019 276 HOH HOH . F 6 HOH A 220 1020 160 HOH HOH . F 6 HOH A 221 1021 219 HOH HOH . F 6 HOH A 222 1022 132 HOH HOH . F 6 HOH A 223 1023 234 HOH HOH . F 6 HOH A 224 1024 206 HOH HOH . F 6 HOH A 225 1025 261 HOH HOH . F 6 HOH A 226 1026 153 HOH HOH . F 6 HOH A 227 1027 45 HOH HOH . F 6 HOH A 228 1028 170 HOH HOH . F 6 HOH A 229 1029 168 HOH HOH . F 6 HOH A 230 1030 118 HOH HOH . F 6 HOH A 231 1031 123 HOH HOH . F 6 HOH A 232 1032 99 HOH HOH . F 6 HOH A 233 1033 288 HOH HOH . F 6 HOH A 234 1034 157 HOH HOH . F 6 HOH A 235 1035 256 HOH HOH . F 6 HOH A 236 1036 162 HOH HOH . F 6 HOH A 237 1037 239 HOH HOH . F 6 HOH A 238 1038 104 HOH HOH . F 6 HOH A 239 1039 260 HOH HOH . F 6 HOH A 240 1040 281 HOH HOH . F 6 HOH A 241 1041 217 HOH HOH . F 6 HOH A 242 1042 232 HOH HOH . F 6 HOH A 243 1043 241 HOH HOH . F 6 HOH A 244 1044 199 HOH HOH . F 6 HOH A 245 1045 195 HOH HOH . F 6 HOH A 246 1046 235 HOH HOH . F 6 HOH A 247 1047 203 HOH HOH . F 6 HOH A 248 1048 254 HOH HOH . F 6 HOH A 249 1049 264 HOH HOH . F 6 HOH A 250 1050 84 HOH HOH . F 6 HOH A 251 1051 169 HOH HOH . F 6 HOH A 252 1052 226 HOH HOH . F 6 HOH A 253 1053 259 HOH HOH . F 6 HOH A 254 1054 269 HOH HOH . F 6 HOH A 255 1055 249 HOH HOH . F 6 HOH A 256 1056 108 HOH HOH . F 6 HOH A 257 1057 293 HOH HOH . F 6 HOH A 258 1058 211 HOH HOH . F 6 HOH A 259 1059 196 HOH HOH . F 6 HOH A 260 1060 245 HOH HOH . F 6 HOH A 261 1061 36 HOH HOH . F 6 HOH A 262 1062 116 HOH HOH . F 6 HOH A 263 1063 263 HOH HOH . F 6 HOH A 264 1064 97 HOH HOH . F 6 HOH A 265 1065 238 HOH HOH . F 6 HOH A 266 1066 296 HOH HOH . F 6 HOH A 267 1067 90 HOH HOH . F 6 HOH A 268 1068 144 HOH HOH . F 6 HOH A 269 1069 164 HOH HOH . F 6 HOH A 270 1070 198 HOH HOH . F 6 HOH A 271 1071 212 HOH HOH . F 6 HOH A 272 1072 275 HOH HOH . F 6 HOH A 273 1073 282 HOH HOH . F 6 HOH A 274 1074 142 HOH HOH . F 6 HOH A 275 1075 191 HOH HOH . F 6 HOH A 276 1076 161 HOH HOH . F 6 HOH A 277 1077 248 HOH HOH . F 6 HOH A 278 1078 240 HOH HOH . F 6 HOH A 279 1079 273 HOH HOH . F 6 HOH A 280 1080 122 HOH HOH . F 6 HOH A 281 1081 210 HOH HOH . F 6 HOH A 282 1082 265 HOH HOH . F 6 HOH A 283 1083 133 HOH HOH . F 6 HOH A 284 1084 107 HOH HOH . F 6 HOH A 285 1085 233 HOH HOH . F 6 HOH A 286 1086 149 HOH HOH . F 6 HOH A 287 1087 143 HOH HOH . F 6 HOH A 288 1088 208 HOH HOH . F 6 HOH A 289 1089 258 HOH HOH . F 6 HOH A 290 1090 213 HOH HOH . F 6 HOH A 291 1091 289 HOH HOH . F 6 HOH A 292 1092 95 HOH HOH . F 6 HOH A 293 1093 244 HOH HOH . F 6 HOH A 294 1094 272 HOH HOH . F 6 HOH A 295 1095 247 HOH HOH . F 6 HOH A 296 1096 155 HOH HOH . F 6 HOH A 297 1097 266 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 5 24.204 8.097 3.152 0.8 13.41 ? C1 EDO 704 A 1 HETATM 2 O O1 EDO . . . E 5 24.824 6.974 2.539 0.7 24.33 ? O1 EDO 704 A 1 HETATM 3 C C2 EDO . . . E 5 23.172 7.674 4.117 0.6 16.87 ? C2 EDO 704 A 1 HETATM 4 O O2 EDO . . . E 5 23.653 7.553 5.436 0.5 23.27 ? O2 EDO 704 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #