data_7N6D # _model_server_result.job_id eCDKETi2iBjR_g8n_j6Cww _model_server_result.datetime_utc '2024-11-12 20:42:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7n6d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":101}' # _entry.id 7N6D # _exptl.entry_id 7N6D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 17 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7N6D _cell.length_a 85.197 _cell.length_b 85.197 _cell.length_c 442.85 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7N6D _symmetry.cell_setting ? _symmetry.Int_Tables_number 151 _symmetry.space_group_name_Hall 'P 31 2 (x,y,z+1/3)' _symmetry.space_group_name_H-M 'P 31 1 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA trimeric 3 author_and_software_defined_assembly 3 PISA trimeric 3 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,M,N,O,P,DA,EA,FA 1 1 D,E,F,Q,R,S,T,GA,HA,IA 2 1 G,H,I,U,V,W,X,Y,JA,KA,LA 3 1 J,K,L,Z,AA,BA,CA,MA,NA,OA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 Y N N ? 4 Z N N ? 4 AA N N ? 4 BA N N ? 4 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 D SG CYS 101 E CYS 101 1_555 D SG CYS 164 E CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 D SG CYS 203 E CYS 203 1_555 D SG CYS 259 E CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 E SG CYS 26 F CYS 25 1_555 E SG CYS 81 F CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf7 G SG CYS 101 I CYS 101 1_555 G SG CYS 164 I CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf8 G SG CYS 203 I CYS 203 1_555 G SG CYS 259 I CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf9 H SG CYS 26 J CYS 25 1_555 H SG CYS 81 J CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 J SG CYS 101 M CYS 101 1_555 J SG CYS 164 M CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf11 J SG CYS 203 M CYS 203 1_555 J SG CYS 259 M CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf12 K SG CYS 26 N CYS 25 1_555 K SG CYS 81 N CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7N6D _atom_sites.fract_transf_matrix[1][1] 0.011738 _atom_sites.fract_transf_matrix[1][2] 0.006777 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013553 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002258 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 EDO A 1 301 16 EDO EDO . N 4 EDO B 1 101 2 EDO EDO . O 4 EDO B 1 102 11 EDO EDO . P 4 EDO C 1 101 3 EDO EDO . Q 4 EDO E 1 301 9 EDO EDO . R 4 EDO F 1 101 6 EDO EDO . S 4 EDO F 1 102 19 EDO EDO . T 4 EDO G 1 101 7 EDO EDO . U 4 EDO I 1 301 12 EDO EDO . V 4 EDO I 1 302 15 EDO EDO . W 4 EDO I 1 303 25 EDO EDO . X 4 EDO J 1 101 8 EDO EDO . Y 4 EDO K 1 101 1 EDO EDO . Z 4 EDO M 1 301 5 EDO EDO . AA 4 EDO N 1 101 4 EDO EDO . BA 4 EDO O 1 101 10 EDO EDO . CA 4 EDO O 1 102 31 EDO EDO . DA 5 HOH A 1 401 210 HOH HOH . DA 5 HOH A 2 402 209 HOH HOH . DA 5 HOH A 3 403 43 HOH HOH . DA 5 HOH A 4 404 201 HOH HOH . DA 5 HOH A 5 405 4 HOH HOH . DA 5 HOH A 6 406 303 HOH HOH . DA 5 HOH A 7 407 332 HOH HOH . DA 5 HOH A 8 408 95 HOH HOH . DA 5 HOH A 9 409 46 HOH HOH . DA 5 HOH A 10 410 10 HOH HOH . DA 5 HOH A 11 411 48 HOH HOH . DA 5 HOH A 12 412 160 HOH HOH . DA 5 HOH A 13 413 9 HOH HOH . DA 5 HOH A 14 414 42 HOH HOH . DA 5 HOH A 15 415 64 HOH HOH . DA 5 HOH A 16 416 6 HOH HOH . DA 5 HOH A 17 417 174 HOH HOH . DA 5 HOH A 18 418 124 HOH HOH . DA 5 HOH A 19 419 152 HOH HOH . DA 5 HOH A 20 420 89 HOH HOH . DA 5 HOH A 21 421 28 HOH HOH . DA 5 HOH A 22 422 131 HOH HOH . DA 5 HOH A 23 423 333 HOH HOH . DA 5 HOH A 24 424 127 HOH HOH . DA 5 HOH A 25 425 60 HOH HOH . DA 5 HOH A 26 426 253 HOH HOH . DA 5 HOH A 27 427 246 HOH HOH . DA 5 HOH A 28 428 191 HOH HOH . DA 5 HOH A 29 429 343 HOH HOH . DA 5 HOH A 30 430 114 HOH HOH . DA 5 HOH A 31 431 243 HOH HOH . DA 5 HOH A 32 432 334 HOH HOH . EA 5 HOH B 1 201 214 HOH HOH . EA 5 HOH B 2 202 76 HOH HOH . EA 5 HOH B 3 203 34 HOH HOH . EA 5 HOH B 4 204 280 HOH HOH . EA 5 HOH B 5 205 57 HOH HOH . EA 5 HOH B 6 206 198 HOH HOH . EA 5 HOH B 7 207 82 HOH HOH . EA 5 HOH B 8 208 236 HOH HOH . EA 5 HOH B 9 209 231 HOH HOH . EA 5 HOH B 10 210 121 HOH HOH . EA 5 HOH B 11 211 106 HOH HOH . EA 5 HOH B 12 212 70 HOH HOH . EA 5 HOH B 13 213 32 HOH HOH . EA 5 HOH B 14 214 346 HOH HOH . EA 5 HOH B 15 215 199 HOH HOH . EA 5 HOH B 16 216 270 HOH HOH . EA 5 HOH B 17 217 244 HOH HOH . EA 5 HOH B 18 218 122 HOH HOH . FA 5 HOH C 1 201 5 HOH HOH . FA 5 HOH C 2 202 373 HOH HOH . FA 5 HOH C 3 203 387 HOH HOH . GA 5 HOH E 1 401 224 HOH HOH . GA 5 HOH E 2 402 41 HOH HOH . GA 5 HOH E 3 403 22 HOH HOH . GA 5 HOH E 4 404 100 HOH HOH . GA 5 HOH E 5 405 98 HOH HOH . GA 5 HOH E 6 406 30 HOH HOH . GA 5 HOH E 7 407 130 HOH HOH . GA 5 HOH E 8 408 281 HOH HOH . GA 5 HOH E 9 409 173 HOH HOH . GA 5 HOH E 10 410 7 HOH HOH . GA 5 HOH E 11 411 228 HOH HOH . GA 5 HOH E 12 412 80 HOH HOH . GA 5 HOH E 13 413 16 HOH HOH . GA 5 HOH E 14 414 143 HOH HOH . GA 5 HOH E 15 415 151 HOH HOH . GA 5 HOH E 16 416 234 HOH HOH . GA 5 HOH E 17 417 94 HOH HOH . GA 5 HOH E 18 418 99 HOH HOH . GA 5 HOH E 19 419 36 HOH HOH . GA 5 HOH E 20 420 155 HOH HOH . GA 5 HOH E 21 421 72 HOH HOH . GA 5 HOH E 22 422 282 HOH HOH . GA 5 HOH E 23 423 149 HOH HOH . GA 5 HOH E 24 424 40 HOH HOH . GA 5 HOH E 25 425 259 HOH HOH . GA 5 HOH E 26 426 193 HOH HOH . GA 5 HOH E 27 427 73 HOH HOH . GA 5 HOH E 28 428 117 HOH HOH . GA 5 HOH E 29 429 217 HOH HOH . GA 5 HOH E 30 430 276 HOH HOH . GA 5 HOH E 31 431 164 HOH HOH . GA 5 HOH E 32 432 145 HOH HOH . GA 5 HOH E 33 433 141 HOH HOH . GA 5 HOH E 34 434 180 HOH HOH . GA 5 HOH E 35 435 35 HOH HOH . GA 5 HOH E 36 436 272 HOH HOH . GA 5 HOH E 37 437 26 HOH HOH . GA 5 HOH E 38 438 200 HOH HOH . GA 5 HOH E 39 439 372 HOH HOH . GA 5 HOH E 40 440 170 HOH HOH . GA 5 HOH E 41 441 229 HOH HOH . GA 5 HOH E 42 442 340 HOH HOH . GA 5 HOH E 43 443 274 HOH HOH . GA 5 HOH E 44 444 314 HOH HOH . HA 5 HOH F 1 201 205 HOH HOH . HA 5 HOH F 2 202 8 HOH HOH . HA 5 HOH F 3 203 51 HOH HOH . HA 5 HOH F 4 204 238 HOH HOH . HA 5 HOH F 5 205 61 HOH HOH . HA 5 HOH F 6 206 368 HOH HOH . HA 5 HOH F 7 207 37 HOH HOH . HA 5 HOH F 8 208 154 HOH HOH . HA 5 HOH F 9 209 195 HOH HOH . HA 5 HOH F 10 210 153 HOH HOH . HA 5 HOH F 11 211 107 HOH HOH . HA 5 HOH F 12 212 74 HOH HOH . HA 5 HOH F 13 213 97 HOH HOH . HA 5 HOH F 14 214 54 HOH HOH . HA 5 HOH F 15 215 189 HOH HOH . HA 5 HOH F 16 216 218 HOH HOH . HA 5 HOH F 17 217 361 HOH HOH . HA 5 HOH F 18 218 125 HOH HOH . HA 5 HOH F 19 219 258 HOH HOH . HA 5 HOH F 20 220 327 HOH HOH . HA 5 HOH F 21 221 177 HOH HOH . HA 5 HOH F 22 222 178 HOH HOH . IA 5 HOH G 1 201 133 HOH HOH . IA 5 HOH G 2 202 116 HOH HOH . JA 5 HOH I 1 401 17 HOH HOH . JA 5 HOH I 2 402 19 HOH HOH . JA 5 HOH I 3 403 330 HOH HOH . JA 5 HOH I 4 404 53 HOH HOH . JA 5 HOH I 5 405 90 HOH HOH . JA 5 HOH I 6 406 38 HOH HOH . JA 5 HOH I 7 407 239 HOH HOH . JA 5 HOH I 8 408 44 HOH HOH . JA 5 HOH I 9 409 92 HOH HOH . JA 5 HOH I 10 410 103 HOH HOH . JA 5 HOH I 11 411 289 HOH HOH . JA 5 HOH I 12 412 142 HOH HOH . JA 5 HOH I 13 413 104 HOH HOH . JA 5 HOH I 14 414 360 HOH HOH . JA 5 HOH I 15 415 203 HOH HOH . JA 5 HOH I 16 416 31 HOH HOH . JA 5 HOH I 17 417 118 HOH HOH . JA 5 HOH I 18 418 188 HOH HOH . JA 5 HOH I 19 419 378 HOH HOH . JA 5 HOH I 20 420 14 HOH HOH . JA 5 HOH I 21 421 266 HOH HOH . JA 5 HOH I 22 422 85 HOH HOH . JA 5 HOH I 23 423 260 HOH HOH . JA 5 HOH I 24 424 157 HOH HOH . JA 5 HOH I 25 425 65 HOH HOH . JA 5 HOH I 26 426 183 HOH HOH . JA 5 HOH I 27 427 111 HOH HOH . JA 5 HOH I 28 428 307 HOH HOH . JA 5 HOH I 29 429 167 HOH HOH . JA 5 HOH I 30 430 267 HOH HOH . JA 5 HOH I 31 431 283 HOH HOH . JA 5 HOH I 32 432 331 HOH HOH . JA 5 HOH I 33 433 110 HOH HOH . JA 5 HOH I 34 434 79 HOH HOH . KA 5 HOH J 1 201 215 HOH HOH . KA 5 HOH J 2 202 175 HOH HOH . KA 5 HOH J 3 203 50 HOH HOH . KA 5 HOH J 4 204 389 HOH HOH . KA 5 HOH J 5 205 369 HOH HOH . LA 5 HOH K 1 201 168 HOH HOH . LA 5 HOH K 2 202 68 HOH HOH . LA 5 HOH K 3 203 391 HOH HOH . MA 5 HOH M 1 401 15 HOH HOH . MA 5 HOH M 2 402 179 HOH HOH . MA 5 HOH M 3 403 126 HOH HOH . MA 5 HOH M 4 404 20 HOH HOH . MA 5 HOH M 5 405 341 HOH HOH . MA 5 HOH M 6 406 12 HOH HOH . MA 5 HOH M 7 407 275 HOH HOH . MA 5 HOH M 8 408 39 HOH HOH . MA 5 HOH M 9 409 27 HOH HOH . MA 5 HOH M 10 410 62 HOH HOH . MA 5 HOH M 11 411 135 HOH HOH . MA 5 HOH M 12 412 329 HOH HOH . MA 5 HOH M 13 413 47 HOH HOH . MA 5 HOH M 14 414 162 HOH HOH . MA 5 HOH M 15 415 147 HOH HOH . MA 5 HOH M 16 416 268 HOH HOH . MA 5 HOH M 17 417 301 HOH HOH . MA 5 HOH M 18 418 58 HOH HOH . MA 5 HOH M 19 419 220 HOH HOH . MA 5 HOH M 20 420 194 HOH HOH . MA 5 HOH M 21 421 324 HOH HOH . MA 5 HOH M 22 422 348 HOH HOH . MA 5 HOH M 23 423 235 HOH HOH . MA 5 HOH M 24 424 112 HOH HOH . MA 5 HOH M 25 425 338 HOH HOH . MA 5 HOH M 26 426 81 HOH HOH . MA 5 HOH M 27 427 322 HOH HOH . MA 5 HOH M 28 428 288 HOH HOH . MA 5 HOH M 29 429 342 HOH HOH . NA 5 HOH N 1 201 55 HOH HOH . NA 5 HOH N 2 202 11 HOH HOH . NA 5 HOH N 3 203 337 HOH HOH . NA 5 HOH N 4 204 93 HOH HOH . NA 5 HOH N 5 205 299 HOH HOH . NA 5 HOH N 6 206 320 HOH HOH . OA 5 HOH O 1 201 69 HOH HOH . OA 5 HOH O 2 202 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . BA 4 -14.436 -41.01 13.759 1 52.25 ? C1 EDO 101 O 1 HETATM 2 O O1 EDO . . . BA 4 -14.587 -39.604 13.962 1 55.11 ? O1 EDO 101 O 1 HETATM 3 C C2 EDO . . . BA 4 -14.276 -41.288 12.273 1 50.7 ? C2 EDO 101 O 1 HETATM 4 O O2 EDO . . . BA 4 -14.309 -42.7 12.068 1 35.76 ? O2 EDO 101 O 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #