data_7N70 # _model_server_result.job_id xKQR0WLqVzOUlQTa0_VMMw _model_server_result.datetime_utc '2024-11-22 07:38:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7n70 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1203}' # _entry.id 7N70 # _exptl.entry_id 7N70 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7N70 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7N70 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 508 A ASP 508 1_555 B BE BEF . A BEF 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.41 ? metalc ? metalc2 A OD2 ASP 508 A ASP 508 1_555 C MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc3 A O THR 510 A THR 510 1_555 C MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc4 A OD1 ASP 873 A ASP 873 1_555 C MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 459 n n CBA CAB Y01 sing 460 n n CBA CAN Y01 sing 461 n n CAN CAJ Y01 sing 462 n n CAJ CAO Y01 sing 463 n n CAO CBB Y01 sing 464 n n CBB CAC Y01 sing 465 n n CBB CBE Y01 sing 466 n n CBE CAP Y01 sing 467 n n CBE CBI Y01 sing 468 n n CAP CAQ Y01 sing 469 n n CAQ CBG Y01 sing 470 n n CBG CBI Y01 sing 471 n n CBG CBD Y01 sing 472 n n CBI CAE Y01 sing 473 n n CBI CAU Y01 sing 474 n n CAU CAS Y01 sing 475 n n CAS CBF Y01 sing 476 n n CBF CBD Y01 sing 477 n n CBF CBH Y01 sing 478 n n CBD CAK Y01 sing 479 n n CAK CAI Y01 sing 480 n n CAI CAZ Y01 doub 481 n n CAZ CAV Y01 sing 482 n n CAZ CBH Y01 sing 483 n n CAV CBC Y01 sing 484 n n CBH CAD Y01 sing 485 n n CBH CAT Y01 sing 486 n n CAT CAR Y01 sing 487 n n CAR CBC Y01 sing 488 n n CBC OAW Y01 sing 489 n n OAW CAY Y01 sing 490 n n CAY OAG Y01 doub 491 n n CAY CAM Y01 sing 492 n n CAM CAL Y01 sing 493 n n CAL CAX Y01 sing 494 n n CAX OAH Y01 sing 495 n n CAX OAF Y01 doub 496 n n CAA HAA1 Y01 sing 497 n n CAA HAA2 Y01 sing 498 n n CAA HAA3 Y01 sing 499 n n CBA HBA Y01 sing 500 n n CAB HAB1 Y01 sing 501 n n CAB HAB2 Y01 sing 502 n n CAB HAB3 Y01 sing 503 n n CAN HAN1 Y01 sing 504 n n CAN HAN2 Y01 sing 505 n n CAJ HAJ1 Y01 sing 506 n n CAJ HAJ2 Y01 sing 507 n n CAO HAO1 Y01 sing 508 n n CAO HAO2 Y01 sing 509 n n CBB HBB Y01 sing 510 n n CAC HAC1 Y01 sing 511 n n CAC HAC2 Y01 sing 512 n n CAC HAC3 Y01 sing 513 n n CBE HBE Y01 sing 514 n n CAP HAP1 Y01 sing 515 n n CAP HAP2 Y01 sing 516 n n CAQ HAQ1 Y01 sing 517 n n CAQ HAQ2 Y01 sing 518 n n CBG HBG Y01 sing 519 n n CBD HBD Y01 sing 520 n n CAE HAE1 Y01 sing 521 n n CAE HAE2 Y01 sing 522 n n CAE HAE3 Y01 sing 523 n n CAU HAU1 Y01 sing 524 n n CAU HAU2 Y01 sing 525 n n CAS HAS1 Y01 sing 526 n n CAS HAS2 Y01 sing 527 n n CBF HBF Y01 sing 528 n n CAK HAK1 Y01 sing 529 n n CAK HAK2 Y01 sing 530 n n CAI HAI Y01 sing 531 n n CAV HAV1 Y01 sing 532 n n CAV HAV2 Y01 sing 533 n n CBC HBC Y01 sing 534 n n CAD HAD1 Y01 sing 535 n n CAD HAD2 Y01 sing 536 n n CAD HAD3 Y01 sing 537 n n CAT HAT1 Y01 sing 538 n n CAT HAT2 Y01 sing 539 n n CAR HAR1 Y01 sing 540 n n CAR HAR2 Y01 sing 541 n n CAM HAM1 Y01 sing 542 n n CAM HAM2 Y01 sing 543 n n CAL HAL1 Y01 sing 544 n n CAL HAL2 Y01 sing 545 n n OAH HAH Y01 sing 546 n n # _atom_sites.entry_id 7N70 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BEF A 1 1201 1201 BEF BEF . C 3 MG A 1 1202 1202 MG MG . D 4 Y01 A 1 1203 1301 Y01 Y01 . E 5 LMT A 1 1204 1302 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . D 4 126.4 153.295 129.51 1 49.89 ? CAA Y01 1203 A 1 HETATM 2 C CBA Y01 . . . D 4 125.718 151.932 129.306 1 49.89 ? CBA Y01 1203 A 1 HETATM 3 C CAB Y01 . . . D 4 124.887 152.01 128.016 1 49.89 ? CAB Y01 1203 A 1 HETATM 4 C CAN Y01 . . . D 4 126.732 150.744 129.291 1 49.89 ? CAN Y01 1203 A 1 HETATM 5 C CAJ Y01 . . . D 4 126.57 149.676 130.402 1 49.89 ? CAJ Y01 1203 A 1 HETATM 6 C CAO Y01 . . . D 4 127.839 148.879 130.759 1 49.89 ? CAO Y01 1203 A 1 HETATM 7 C CBB Y01 . . . D 4 127.632 147.83 131.877 1 49.89 ? CBB Y01 1203 A 1 HETATM 8 C CAC Y01 . . . D 4 127.073 146.51 131.314 1 49.89 ? CAC Y01 1203 A 1 HETATM 9 C CBE Y01 . . . D 4 128.965 147.653 132.651 1 49.89 ? CBE Y01 1203 A 1 HETATM 10 C CAP Y01 . . . D 4 129.44 148.897 133.459 1 49.89 ? CAP Y01 1203 A 1 HETATM 11 C CAQ Y01 . . . D 4 130.276 148.414 134.626 1 49.89 ? CAQ Y01 1203 A 1 HETATM 12 C CBG Y01 . . . D 4 130.303 146.919 134.36 1 49.89 ? CBG Y01 1203 A 1 HETATM 13 C CBI Y01 . . . D 4 128.938 146.56 133.742 1 49.89 ? CBI Y01 1203 A 1 HETATM 14 C CAE Y01 . . . D 4 127.689 146.635 134.699 1 49.89 ? CAE Y01 1203 A 1 HETATM 15 C CAU Y01 . . . D 4 128.992 145.103 133.267 1 49.89 ? CAU Y01 1203 A 1 HETATM 16 C CAS Y01 . . . D 4 129.22 144.225 134.48 1 49.89 ? CAS Y01 1203 A 1 HETATM 17 C CBF Y01 . . . D 4 130.467 144.63 135.265 1 49.89 ? CBF Y01 1203 A 1 HETATM 18 C CBD Y01 . . . D 4 130.494 146.125 135.621 1 49.89 ? CBD Y01 1203 A 1 HETATM 19 C CAK Y01 . . . D 4 131.901 146.479 136.124 1 49.89 ? CAK Y01 1203 A 1 HETATM 20 C CAI Y01 . . . D 4 132.198 145.577 137.271 1 49.89 ? CAI Y01 1203 A 1 HETATM 21 C CAZ Y01 . . . D 4 131.747 144.314 137.428 1 49.89 ? CAZ Y01 1203 A 1 HETATM 22 C CAV Y01 . . . D 4 132.146 143.339 138.559 1 49.89 ? CAV Y01 1203 A 1 HETATM 23 C CBH Y01 . . . D 4 130.583 143.887 136.609 1 49.89 ? CBH Y01 1203 A 1 HETATM 24 C CAD Y01 . . . D 4 129.409 144.29 137.557 1 49.89 ? CAD Y01 1203 A 1 HETATM 25 C CAT Y01 . . . D 4 130.687 142.385 136.391 1 49.89 ? CAT Y01 1203 A 1 HETATM 26 C CAR Y01 . . . D 4 130.551 141.515 137.619 1 49.89 ? CAR Y01 1203 A 1 HETATM 27 C CBC Y01 . . . D 4 131.64 141.806 138.681 1 49.89 ? CBC Y01 1203 A 1 HETATM 28 O OAW Y01 . . . D 4 131.068 141.448 139.972 1 49.89 ? OAW Y01 1203 A 1 HETATM 29 C CAY Y01 . . . D 4 131.863 141.24 141.12 1 49.89 ? CAY Y01 1203 A 1 HETATM 30 O OAG Y01 . . . D 4 132.877 141.907 141.159 1 49.89 ? OAG Y01 1203 A 1 HETATM 31 C CAM Y01 . . . D 4 131.535 140.245 142.299 1 49.89 ? CAM Y01 1203 A 1 HETATM 32 C CAL Y01 . . . D 4 132.771 139.559 142.938 1 49.89 ? CAL Y01 1203 A 1 HETATM 33 C CAX Y01 . . . D 4 132.513 138.162 143.675 1 49.89 ? CAX Y01 1203 A 1 HETATM 34 O OAH Y01 . . . D 4 131.999 137.242 143.008 1 49.89 ? OAH Y01 1203 A 1 HETATM 35 O OAF Y01 . . . D 4 132.849 138.077 144.879 1 49.89 ? OAF Y01 1203 A 1 HETATM 36 H HAA1 Y01 . . . D 4 126.829 153.386 130.375 1 49.89 ? HAA1 Y01 1203 A 1 HETATM 37 H HAA2 Y01 . . . D 4 125.793 154.05 129.469 1 49.89 ? HAA2 Y01 1203 A 1 HETATM 38 H HAA3 Y01 . . . D 4 127.084 153.499 128.853 1 49.89 ? HAA3 Y01 1203 A 1 HETATM 39 H HBA Y01 . . . D 4 125.099 151.811 130.044 1 49.89 ? HBA Y01 1203 A 1 HETATM 40 H HAB1 Y01 . . . D 4 124.589 151.142 127.702 1 49.89 ? HAB1 Y01 1203 A 1 HETATM 41 H HAB2 Y01 . . . D 4 125.354 152.421 127.272 1 49.89 ? HAB2 Y01 1203 A 1 HETATM 42 H HAB3 Y01 . . . D 4 124.071 152.526 128.108 1 49.89 ? HAB3 Y01 1203 A 1 HETATM 43 H HAN1 Y01 . . . D 4 127.633 151.099 129.326 1 49.89 ? HAN1 Y01 1203 A 1 HETATM 44 H HAN2 Y01 . . . D 4 126.695 150.302 128.43 1 49.89 ? HAN2 Y01 1203 A 1 HETATM 45 H HAJ1 Y01 . . . D 4 126.249 150.096 131.214 1 49.89 ? HAJ1 Y01 1203 A 1 HETATM 46 H HAJ2 Y01 . . . D 4 125.88 149.042 130.154 1 49.89 ? HAJ2 Y01 1203 A 1 HETATM 47 H HAO1 Y01 . . . D 4 128.235 148.431 129.995 1 49.89 ? HAO1 Y01 1203 A 1 HETATM 48 H HAO2 Y01 . . . D 4 128.536 149.494 131.029 1 49.89 ? HAO2 Y01 1203 A 1 HETATM 49 H HBB Y01 . . . D 4 127.004 148.168 132.535 1 49.89 ? HBB Y01 1203 A 1 HETATM 50 H HAC1 Y01 . . . D 4 127.72 145.866 130.991 1 49.89 ? HAC1 Y01 1203 A 1 HETATM 51 H HAC2 Y01 . . . D 4 126.559 146.001 131.96 1 49.89 ? HAC2 Y01 1203 A 1 HETATM 52 H HAC3 Y01 . . . D 4 126.479 146.641 130.559 1 49.89 ? HAC3 Y01 1203 A 1 HETATM 53 H HBE Y01 . . . D 4 129.665 147.411 132.027 1 49.89 ? HBE Y01 1203 A 1 HETATM 54 H HAP1 Y01 . . . D 4 129.98 149.507 132.934 1 49.89 ? HAP1 Y01 1203 A 1 HETATM 55 H HAP2 Y01 . . . D 4 128.677 149.39 133.799 1 49.89 ? HAP2 Y01 1203 A 1 HETATM 56 H HAQ1 Y01 . . . D 4 129.928 148.632 135.505 1 49.89 ? HAQ1 Y01 1203 A 1 HETATM 57 H HAQ2 Y01 . . . D 4 131.173 148.766 134.723 1 49.89 ? HAQ2 Y01 1203 A 1 HETATM 58 H HBG Y01 . . . D 4 131.088 146.708 133.836 1 49.89 ? HBG Y01 1203 A 1 HETATM 59 H HBD Y01 . . . D 4 129.852 146.483 136.241 1 49.89 ? HBD Y01 1203 A 1 HETATM 60 H HAE1 Y01 . . . D 4 126.954 146.067 134.42 1 49.89 ? HAE1 Y01 1203 A 1 HETATM 61 H HAE2 Y01 . . . D 4 127.356 147.528 134.876 1 49.89 ? HAE2 Y01 1203 A 1 HETATM 62 H HAE3 Y01 . . . D 4 127.813 146.282 135.591 1 49.89 ? HAE3 Y01 1203 A 1 HETATM 63 H HAU1 Y01 . . . D 4 129.678 144.895 132.613 1 49.89 ? HAU1 Y01 1203 A 1 HETATM 64 H HAU2 Y01 . . . D 4 128.123 144.868 132.936 1 49.89 ? HAU2 Y01 1203 A 1 HETATM 65 H HAS1 Y01 . . . D 4 129.169 143.331 134.109 1 49.89 ? HAS1 Y01 1203 A 1 HETATM 66 H HAS2 Y01 . . . D 4 128.444 144.267 135.042 1 49.89 ? HAS2 Y01 1203 A 1 HETATM 67 H HBF Y01 . . . D 4 131.207 144.504 134.654 1 49.89 ? HBF Y01 1203 A 1 HETATM 68 H HAK1 Y01 . . . D 4 132.514 146.461 135.372 1 49.89 ? HAK1 Y01 1203 A 1 HETATM 69 H HAK2 Y01 . . . D 4 131.883 147.426 136.287 1 49.89 ? HAK2 Y01 1203 A 1 HETATM 70 H HAI Y01 . . . D 4 132.682 146.073 137.89 1 49.89 ? HAI Y01 1203 A 1 HETATM 71 H HAV1 Y01 . . . D 4 133.116 143.326 138.598 1 49.89 ? HAV1 Y01 1203 A 1 HETATM 72 H HAV2 Y01 . . . D 4 131.85 143.794 139.361 1 49.89 ? HAV2 Y01 1203 A 1 HETATM 73 H HBC Y01 . . . D 4 132.385 141.22 138.478 1 49.89 ? HBC Y01 1203 A 1 HETATM 74 H HAD1 Y01 . . . D 4 129.477 143.75 138.354 1 49.89 ? HAD1 Y01 1203 A 1 HETATM 75 H HAD2 Y01 . . . D 4 129.465 145.183 137.931 1 49.89 ? HAD2 Y01 1203 A 1 HETATM 76 H HAD3 Y01 . . . D 4 128.521 144.132 137.205 1 49.89 ? HAD3 Y01 1203 A 1 HETATM 77 H HAT1 Y01 . . . D 4 130.016 142.093 135.76 1 49.89 ? HAT1 Y01 1203 A 1 HETATM 78 H HAT2 Y01 . . . D 4 131.534 142.197 135.959 1 49.89 ? HAT2 Y01 1203 A 1 HETATM 79 H HAR1 Y01 . . . D 4 130.638 140.586 137.357 1 49.89 ? HAR1 Y01 1203 A 1 HETATM 80 H HAR2 Y01 . . . D 4 129.654 141.568 137.98 1 49.89 ? HAR2 Y01 1203 A 1 HETATM 81 H HAM1 Y01 . . . D 4 131.082 140.719 143.012 1 49.89 ? HAM1 Y01 1203 A 1 HETATM 82 H HAM2 Y01 . . . D 4 130.921 139.544 142.035 1 49.89 ? HAM2 Y01 1203 A 1 HETATM 83 H HAL1 Y01 . . . D 4 133.204 140.135 143.587 1 49.89 ? HAL1 Y01 1203 A 1 HETATM 84 H HAL2 Y01 . . . D 4 133.458 139.39 142.277 1 49.89 ? HAL2 Y01 1203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 84 #