data_7N77
#
_model_server_result.job_id            ndL7Du7iM6Y-ImnLhjeNmw 
_model_server_result.datetime_utc      '2024-11-21 14:18:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7n77 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1204}' 
#
_entry.id    7N77 
#
_exptl.entry_id    7N77 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7N77 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7N77 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O THR 510 A THR 510 1_555 C MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc2 A OD1 ASP 873 A ASP 873 1_555 C MG MG . A MG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 380 n n 
CBA CAB Y01 sing 381 n n 
CBA CAN Y01 sing 382 n n 
CAN CAJ Y01 sing 383 n n 
CAJ CAO Y01 sing 384 n n 
CAO CBB Y01 sing 385 n n 
CBB CAC Y01 sing 386 n n 
CBB CBE Y01 sing 387 n n 
CBE CAP Y01 sing 388 n n 
CBE CBI Y01 sing 389 n n 
CAP CAQ Y01 sing 390 n n 
CAQ CBG Y01 sing 391 n n 
CBG CBI Y01 sing 392 n n 
CBG CBD Y01 sing 393 n n 
CBI CAE Y01 sing 394 n n 
CBI CAU Y01 sing 395 n n 
CAU CAS Y01 sing 396 n n 
CAS CBF Y01 sing 397 n n 
CBF CBD Y01 sing 398 n n 
CBF CBH Y01 sing 399 n n 
CBD CAK Y01 sing 400 n n 
CAK CAI Y01 sing 401 n n 
CAI CAZ Y01 doub 402 n n 
CAZ CAV Y01 sing 403 n n 
CAZ CBH Y01 sing 404 n n 
CAV CBC Y01 sing 405 n n 
CBH CAD Y01 sing 406 n n 
CBH CAT Y01 sing 407 n n 
CAT CAR Y01 sing 408 n n 
CAR CBC Y01 sing 409 n n 
CBC OAW Y01 sing 410 n n 
OAW CAY Y01 sing 411 n n 
CAY OAG Y01 doub 412 n n 
CAY CAM Y01 sing 413 n n 
CAM CAL Y01 sing 414 n n 
CAL CAX Y01 sing 415 n n 
CAX OAH Y01 sing 416 n n 
CAX OAF Y01 doub 417 n n 
CAA HAA1 Y01 sing 418 n n 
CAA HAA2 Y01 sing 419 n n 
CAA HAA3 Y01 sing 420 n n 
CBA HBA Y01 sing 421 n n 
CAB HAB1 Y01 sing 422 n n 
CAB HAB2 Y01 sing 423 n n 
CAB HAB3 Y01 sing 424 n n 
CAN HAN1 Y01 sing 425 n n 
CAN HAN2 Y01 sing 426 n n 
CAJ HAJ1 Y01 sing 427 n n 
CAJ HAJ2 Y01 sing 428 n n 
CAO HAO1 Y01 sing 429 n n 
CAO HAO2 Y01 sing 430 n n 
CBB HBB Y01 sing 431 n n 
CAC HAC1 Y01 sing 432 n n 
CAC HAC2 Y01 sing 433 n n 
CAC HAC3 Y01 sing 434 n n 
CBE HBE Y01 sing 435 n n 
CAP HAP1 Y01 sing 436 n n 
CAP HAP2 Y01 sing 437 n n 
CAQ HAQ1 Y01 sing 438 n n 
CAQ HAQ2 Y01 sing 439 n n 
CBG HBG Y01 sing 440 n n 
CBD HBD Y01 sing 441 n n 
CAE HAE1 Y01 sing 442 n n 
CAE HAE2 Y01 sing 443 n n 
CAE HAE3 Y01 sing 444 n n 
CAU HAU1 Y01 sing 445 n n 
CAU HAU2 Y01 sing 446 n n 
CAS HAS1 Y01 sing 447 n n 
CAS HAS2 Y01 sing 448 n n 
CBF HBF Y01 sing 449 n n 
CAK HAK1 Y01 sing 450 n n 
CAK HAK2 Y01 sing 451 n n 
CAI HAI Y01 sing 452 n n 
CAV HAV1 Y01 sing 453 n n 
CAV HAV2 Y01 sing 454 n n 
CBC HBC Y01 sing 455 n n 
CAD HAD1 Y01 sing 456 n n 
CAD HAD2 Y01 sing 457 n n 
CAD HAD3 Y01 sing 458 n n 
CAT HAT1 Y01 sing 459 n n 
CAT HAT2 Y01 sing 460 n n 
CAR HAR1 Y01 sing 461 n n 
CAR HAR2 Y01 sing 462 n n 
CAM HAM1 Y01 sing 463 n n 
CAM HAM2 Y01 sing 464 n n 
CAL HAL1 Y01 sing 465 n n 
CAL HAL2 Y01 sing 466 n n 
OAH HAH Y01 sing 467 n n 
#
_atom_sites.entry_id                     7N77 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ALF A 1 1201 1201 ALF ALF . 
C 3 MG A 1 1202 1202 MG MG . 
D 4 Y01 A 1 1203 1301 Y01 Y01 . 
E 4 Y01 A 1 1204 1302 Y01 Y01 . 
F 5 HOH A 1 1301 1304 HOH HOH . 
F 5 HOH A 2 1302 1303 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . E 4 141.93 164.036 153.053 1 17.39 ? CAA Y01 1204 A 1 
HETATM 2 C CBA Y01 . . . E 4 143.125 164.074 154.019 1 17.39 ? CBA Y01 1204 A 1 
HETATM 3 C CAB Y01 . . . E 4 142.678 164.809 155.294 1 17.39 ? CAB Y01 1204 A 1 
HETATM 4 C CAN Y01 . . . E 4 143.711 162.654 154.323 1 17.39 ? CAN Y01 1204 A 1 
HETATM 5 C CAJ Y01 . . . E 4 145.055 162.604 155.096 1 17.39 ? CAJ Y01 1204 A 1 
HETATM 6 C CAO Y01 . . . E 4 145.155 161.55 156.22 1 17.39 ? CAO Y01 1204 A 1 
HETATM 7 C CBB Y01 . . . E 4 146.287 161.819 157.24 1 17.39 ? CBB Y01 1204 A 1 
HETATM 8 C CAC Y01 . . . E 4 145.985 163.037 158.121 1 17.39 ? CAC Y01 1204 A 1 
HETATM 9 C CBE Y01 . . . E 4 146.521 160.544 158.074 1 17.39 ? CBE Y01 1204 A 1 
HETATM 10 C CAP Y01 . . . E 4 147.104 159.318 157.294 1 17.39 ? CAP Y01 1204 A 1 
HETATM 11 C CAQ Y01 . . . E 4 148.098 158.629 158.202 1 17.39 ? CAQ Y01 1204 A 1 
HETATM 12 C CBG Y01 . . . E 4 147.638 159.205 159.512 1 17.39 ? CBG Y01 1204 A 1 
HETATM 13 C CBI Y01 . . . E 4 147.534 160.711 159.235 1 17.39 ? CBI Y01 1204 A 1 
HETATM 14 C CAE Y01 . . . E 4 148.865 161.426 158.832 1 17.39 ? CAE Y01 1204 A 1 
HETATM 15 C CAU Y01 . . . E 4 147.044 161.445 160.496 1 17.39 ? CAU Y01 1204 A 1 
HETATM 16 C CAS Y01 . . . E 4 148.004 161.129 161.628 1 17.39 ? CAS Y01 1204 A 1 
HETATM 17 C CBF Y01 . . . E 4 148.081 159.638 161.871 1 17.39 ? CBF Y01 1204 A 1 
HETATM 18 C CBD Y01 . . . E 4 148.612 158.933 160.619 1 17.39 ? CBD Y01 1204 A 1 
HETATM 19 C CAK Y01 . . . E 4 148.59 157.394 160.781 1 17.39 ? CAK Y01 1204 A 1 
HETATM 20 C CAI Y01 . . . E 4 148.768 156.996 162.212 1 17.39 ? CAI Y01 1204 A 1 
HETATM 21 C CAZ Y01 . . . E 4 149.059 157.805 163.251 1 17.39 ? CAZ Y01 1204 A 1 
HETATM 22 C CAV Y01 . . . E 4 149.757 157.398 164.559 1 17.39 ? CAV Y01 1204 A 1 
HETATM 23 C CBH Y01 . . . E 4 149.044 159.265 162.997 1 17.39 ? CBH Y01 1204 A 1 
HETATM 24 C CAD Y01 . . . E 4 150.466 159.462 162.52 1 17.39 ? CAD Y01 1204 A 1 
HETATM 25 C CAT Y01 . . . E 4 148.751 160.026 164.3 1 17.39 ? CAT Y01 1204 A 1 
HETATM 26 C CAR Y01 . . . E 4 149.621 159.687 165.517 1 17.39 ? CAR Y01 1204 A 1 
HETATM 27 C CBC Y01 . . . E 4 149.506 158.205 165.895 1 17.39 ? CBC Y01 1204 A 1 
HETATM 28 O OAW Y01 . . . E 4 150.439 157.939 166.985 1 17.39 ? OAW Y01 1204 A 1 
HETATM 29 H HAA1 Y01 . . . E 4 142.186 163.874 152.131 1 17.39 ? HAA1 Y01 1204 A 1 
HETATM 30 H HAA2 Y01 . . . E 4 141.426 164.863 153.015 1 17.39 ? HAA2 Y01 1204 A 1 
HETATM 31 H HAA3 Y01 . . . E 4 141.269 163.359 153.265 1 17.39 ? HAA3 Y01 1204 A 1 
HETATM 32 H HBA Y01 . . . E 4 143.811 164.616 153.598 1 17.39 ? HBA Y01 1204 A 1 
HETATM 33 H HAB1 Y01 . . . E 4 143.388 164.903 155.948 1 17.39 ? HAB1 Y01 1204 A 1 
HETATM 34 H HAB2 Y01 . . . E 4 141.941 164.381 155.757 1 17.39 ? HAB2 Y01 1204 A 1 
HETATM 35 H HAB3 Y01 . . . E 4 142.372 165.716 155.137 1 17.39 ? HAB3 Y01 1204 A 1 
HETATM 36 H HAN1 Y01 . . . E 4 143.809 162.167 153.49 1 17.39 ? HAN1 Y01 1204 A 1 
HETATM 37 H HAN2 Y01 . . . E 4 143.054 162.134 154.813 1 17.39 ? HAN2 Y01 1204 A 1 
HETATM 38 H HAJ1 Y01 . . . E 4 145.78 162.438 154.476 1 17.39 ? HAJ1 Y01 1204 A 1 
HETATM 39 H HAJ2 Y01 . . . E 4 145.246 163.471 155.481 1 17.39 ? HAJ2 Y01 1204 A 1 
HETATM 40 H HAO1 Y01 . . . E 4 144.326 161.44 156.714 1 17.39 ? HAO1 Y01 1204 A 1 
HETATM 41 H HAO2 Y01 . . . E 4 145.287 160.674 155.828 1 17.39 ? HAO2 Y01 1204 A 1 
HETATM 42 H HBB Y01 . . . E 4 147.124 161.976 156.777 1 17.39 ? HBB Y01 1204 A 1 
HETATM 43 H HAC1 Y01 . . . E 4 146.748 163.493 158.494 1 17.39 ? HAC1 Y01 1204 A 1 
HETATM 44 H HAC2 Y01 . . . E 4 145.525 163.749 157.652 1 17.39 ? HAC2 Y01 1204 A 1 
HETATM 45 H HAC3 Y01 . . . E 4 145.427 162.831 158.887 1 17.39 ? HAC3 Y01 1204 A 1 
HETATM 46 H HBE Y01 . . . E 4 145.68 160.275 158.476 1 17.39 ? HBE Y01 1204 A 1 
HETATM 47 H HAP1 Y01 . . . E 4 146.426 158.671 157.044 1 17.39 ? HAP1 Y01 1204 A 1 
HETATM 48 H HAP2 Y01 . . . E 4 147.555 159.609 156.487 1 17.39 ? HAP2 Y01 1204 A 1 
HETATM 49 H HAQ1 Y01 . . . E 4 149.033 158.81 158.018 1 17.39 ? HAQ1 Y01 1204 A 1 
HETATM 50 H HAQ2 Y01 . . . E 4 148.124 157.67 158.224 1 17.39 ? HAQ2 Y01 1204 A 1 
HETATM 51 H HBG Y01 . . . E 4 146.826 158.758 159.794 1 17.39 ? HBG Y01 1204 A 1 
HETATM 52 H HBD Y01 . . . E 4 149.467 159.192 160.249 1 17.39 ? HBD Y01 1204 A 1 
HETATM 53 H HAE1 Y01 . . . E 4 148.853 162.384 158.977 1 17.39 ? HAE1 Y01 1204 A 1 
HETATM 54 H HAE2 Y01 . . . E 4 149.177 161.243 157.931 1 17.39 ? HAE2 Y01 1204 A 1 
HETATM 55 H HAE3 Y01 . . . E 4 149.64 161.205 159.366 1 17.39 ? HAE3 Y01 1204 A 1 
HETATM 56 H HAU1 Y01 . . . E 4 146.148 161.221 160.792 1 17.39 ? HAU1 Y01 1204 A 1 
HETATM 57 H HAU2 Y01 . . . E 4 147.123 162.39 160.336 1 17.39 ? HAU2 Y01 1204 A 1 
HETATM 58 H HAS1 Y01 . . . E 4 147.711 161.717 162.342 1 17.39 ? HAS1 Y01 1204 A 1 
HETATM 59 H HAS2 Y01 . . . E 4 148.875 161.47 161.399 1 17.39 ? HAS2 Y01 1204 A 1 
HETATM 60 H HBF Y01 . . . E 4 147.166 159.335 161.975 1 17.39 ? HBF Y01 1204 A 1 
HETATM 61 H HAK1 Y01 . . . E 4 147.807 157.048 160.335 1 17.39 ? HAK1 Y01 1204 A 1 
HETATM 62 H HAK2 Y01 . . . E 4 149.254 157.092 160.142 1 17.39 ? HAK2 Y01 1204 A 1 
HETATM 63 H HAI Y01 . . . E 4 148.533 156.098 162.265 1 17.39 ? HAI Y01 1204 A 1 
HETATM 64 H HAV1 Y01 . . . E 4 149.559 156.464 164.732 1 17.39 ? HAV1 Y01 1204 A 1 
HETATM 65 H HAV2 Y01 . . . E 4 150.702 157.456 164.355 1 17.39 ? HAV2 Y01 1204 A 1 
HETATM 66 H HBC Y01 . . . E 4 148.591 158.058 166.185 1 17.39 ? HBC Y01 1204 A 1 
HETATM 67 H HAD1 Y01 . . . E 4 151.036 159.478 163.299 1 17.39 ? HAD1 Y01 1204 A 1 
HETATM 68 H HAD2 Y01 . . . E 4 150.826 158.718 162.026 1 17.39 ? HAD2 Y01 1204 A 1 
HETATM 69 H HAD3 Y01 . . . E 4 150.632 160.289 162.048 1 17.39 ? HAD3 Y01 1204 A 1 
HETATM 70 H HAT1 Y01 . . . E 4 148.836 160.978 164.147 1 17.39 ? HAT1 Y01 1204 A 1 
HETATM 71 H HAT2 Y01 . . . E 4 147.818 159.894 164.528 1 17.39 ? HAT2 Y01 1204 A 1 
HETATM 72 H HAR1 Y01 . . . E 4 149.324 160.211 166.277 1 17.39 ? HAR1 Y01 1204 A 1 
HETATM 73 H HAR2 Y01 . . . E 4 150.538 159.97 165.383 1 17.39 ? HAR2 Y01 1204 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           73 
#