data_7NA1 # _model_server_result.job_id ytkLHu0S0P3cru_oqwnU3Q _model_server_result.datetime_utc '2024-11-29 08:43:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7na1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":202}' # _entry.id 7NA1 # _exptl.entry_id 7NA1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NA1 _cell.length_a 39.349 _cell.length_b 39.432 _cell.length_c 160.389 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NA1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 211 n n C1 C2 GOL sing 212 n n C1 H11 GOL sing 213 n n C1 H12 GOL sing 214 n n O1 HO1 GOL sing 215 n n C2 O2 GOL sing 216 n n C2 C3 GOL sing 217 n n C2 H2 GOL sing 218 n n O2 HO2 GOL sing 219 n n C3 O3 GOL sing 220 n n C3 H31 GOL sing 221 n n C3 H32 GOL sing 222 n n O3 HO3 GOL sing 223 n n # _atom_sites.entry_id 7NA1 _atom_sites.fract_transf_matrix[1][1] 0.025414 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006235 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1GI A 1 201 1 1GI 675 . D 3 SO4 A 1 202 1 SO4 SO4 . E 4 CIT A 1 203 3 CIT CIT . F 2 1GI B 1 201 2 1GI 675 . G 5 GOL B 1 202 2 GOL GOL . H 6 HOH A 1 301 9 HOH HOH . H 6 HOH A 2 302 37 HOH HOH . H 6 HOH A 3 303 76 HOH HOH . H 6 HOH A 4 304 34 HOH HOH . H 6 HOH A 5 305 54 HOH HOH . H 6 HOH A 6 306 12 HOH HOH . H 6 HOH A 7 307 105 HOH HOH . H 6 HOH A 8 308 29 HOH HOH . H 6 HOH A 9 309 55 HOH HOH . H 6 HOH A 10 310 35 HOH HOH . H 6 HOH A 11 311 99 HOH HOH . H 6 HOH A 12 312 10 HOH HOH . H 6 HOH A 13 313 82 HOH HOH . H 6 HOH A 14 314 47 HOH HOH . H 6 HOH A 15 315 36 HOH HOH . H 6 HOH A 16 316 31 HOH HOH . H 6 HOH A 17 317 103 HOH HOH . H 6 HOH A 18 318 67 HOH HOH . H 6 HOH A 19 319 66 HOH HOH . H 6 HOH A 20 320 56 HOH HOH . H 6 HOH A 21 321 5 HOH HOH . H 6 HOH A 22 322 70 HOH HOH . H 6 HOH A 23 323 114 HOH HOH . H 6 HOH A 24 324 49 HOH HOH . H 6 HOH A 25 325 78 HOH HOH . H 6 HOH A 26 326 77 HOH HOH . H 6 HOH A 27 327 46 HOH HOH . H 6 HOH A 28 328 30 HOH HOH . H 6 HOH A 29 329 93 HOH HOH . H 6 HOH A 30 330 86 HOH HOH . H 6 HOH A 31 331 60 HOH HOH . H 6 HOH A 32 332 23 HOH HOH . H 6 HOH A 33 333 115 HOH HOH . H 6 HOH A 34 334 104 HOH HOH . H 6 HOH A 35 335 4 HOH HOH . H 6 HOH A 36 336 59 HOH HOH . H 6 HOH A 37 337 92 HOH HOH . H 6 HOH A 38 338 100 HOH HOH . H 6 HOH A 39 339 113 HOH HOH . H 6 HOH A 40 340 58 HOH HOH . H 6 HOH A 41 341 101 HOH HOH . H 6 HOH A 42 342 91 HOH HOH . H 6 HOH A 43 343 90 HOH HOH . I 6 HOH B 1 301 44 HOH HOH . I 6 HOH B 2 302 19 HOH HOH . I 6 HOH B 3 303 72 HOH HOH . I 6 HOH B 4 304 28 HOH HOH . I 6 HOH B 5 305 68 HOH HOH . I 6 HOH B 6 306 32 HOH HOH . I 6 HOH B 7 307 41 HOH HOH . I 6 HOH B 8 308 16 HOH HOH . I 6 HOH B 9 309 38 HOH HOH . I 6 HOH B 10 310 53 HOH HOH . I 6 HOH B 11 311 85 HOH HOH . I 6 HOH B 12 312 71 HOH HOH . I 6 HOH B 13 313 42 HOH HOH . I 6 HOH B 14 314 24 HOH HOH . I 6 HOH B 15 315 7 HOH HOH . I 6 HOH B 16 316 87 HOH HOH . I 6 HOH B 17 317 69 HOH HOH . I 6 HOH B 18 318 81 HOH HOH . I 6 HOH B 19 319 40 HOH HOH . I 6 HOH B 20 320 65 HOH HOH . I 6 HOH B 21 321 97 HOH HOH . I 6 HOH B 22 322 45 HOH HOH . I 6 HOH B 23 323 79 HOH HOH . I 6 HOH B 24 324 21 HOH HOH . I 6 HOH B 25 325 95 HOH HOH . I 6 HOH B 26 326 75 HOH HOH . I 6 HOH B 27 327 27 HOH HOH . I 6 HOH B 28 328 106 HOH HOH . I 6 HOH B 29 329 57 HOH HOH . I 6 HOH B 30 330 109 HOH HOH . I 6 HOH B 31 331 102 HOH HOH . I 6 HOH B 32 332 48 HOH HOH . I 6 HOH B 33 333 52 HOH HOH . I 6 HOH B 34 334 50 HOH HOH . I 6 HOH B 35 335 88 HOH HOH . I 6 HOH B 36 336 84 HOH HOH . I 6 HOH B 37 337 43 HOH HOH . I 6 HOH B 38 338 96 HOH HOH . I 6 HOH B 39 339 25 HOH HOH . I 6 HOH B 40 340 63 HOH HOH . I 6 HOH B 41 341 17 HOH HOH . I 6 HOH B 42 342 73 HOH HOH . I 6 HOH B 43 343 15 HOH HOH . I 6 HOH B 44 344 18 HOH HOH . I 6 HOH B 45 345 107 HOH HOH . I 6 HOH B 46 346 51 HOH HOH . I 6 HOH B 47 347 116 HOH HOH . I 6 HOH B 48 348 83 HOH HOH . I 6 HOH B 49 349 8 HOH HOH . I 6 HOH B 50 350 13 HOH HOH . I 6 HOH B 51 351 110 HOH HOH . I 6 HOH B 52 352 94 HOH HOH . I 6 HOH B 53 353 61 HOH HOH . I 6 HOH B 54 354 98 HOH HOH . I 6 HOH B 55 355 111 HOH HOH . I 6 HOH B 56 356 74 HOH HOH . I 6 HOH B 57 357 14 HOH HOH . I 6 HOH B 58 358 20 HOH HOH . I 6 HOH B 59 359 108 HOH HOH . I 6 HOH B 60 360 112 HOH HOH . I 6 HOH B 61 361 62 HOH HOH . I 6 HOH B 62 362 64 HOH HOH . I 6 HOH B 63 363 89 HOH HOH . I 6 HOH B 64 364 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 5 3.486 15.879 -19.061 1 33.67 ? C1 GOL 202 B 1 HETATM 2 O O1 GOL . . . G 5 3.023 16.573 -20.211 1 38.7 ? O1 GOL 202 B 1 HETATM 3 C C2 GOL . . . G 5 4.261 14.687 -19.585 1 33.37 ? C2 GOL 202 B 1 HETATM 4 O O2 GOL . . . G 5 5.071 14.211 -18.571 1 22.94 ? O2 GOL 202 B 1 HETATM 5 C C3 GOL . . . G 5 5.051 15.057 -20.84 1 36.38 ? C3 GOL 202 B 1 HETATM 6 O O3 GOL . . . G 5 5.299 13.919 -21.626 1 41.57 ? O3 GOL 202 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #