data_7NB4
#
_model_server_result.job_id            Z-fNP2liOJtmzdTRmZW8tw 
_model_server_result.datetime_utc      '2025-02-18 13:59:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7nb4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    7NB4 
#
_exptl.entry_id    7NB4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              266.331 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7NB4 
_cell.length_a            39.739 
_cell.length_b            39.739 
_cell.length_c            328.268 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NB4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C MG MG . A MG 402 1_555 D O3 PG6 . A PG6 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? 
metalc ? metalc2 C MG MG . A MG 402 1_555 D O3 PG6 . A PG6 403 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.723 ? 
#
_chem_comp.formula           'C12 H26 O6' 
_chem_comp.formula_weight    266.331 
_chem_comp.id                PG6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PG6 sing 237 n n 
C1 H11 PG6 sing 238 n n 
C1 H12 PG6 sing 239 n n 
C1 H13 PG6 sing 240 n n 
O1 C2 PG6 sing 241 n n 
C2 C3 PG6 sing 242 n n 
C2 H21 PG6 sing 243 n n 
C2 H22 PG6 sing 244 n n 
C3 O2 PG6 sing 245 n n 
C3 H31 PG6 sing 246 n n 
C3 H32 PG6 sing 247 n n 
O2 C4 PG6 sing 248 n n 
C4 C5 PG6 sing 249 n n 
C4 H41 PG6 sing 250 n n 
C4 H42 PG6 sing 251 n n 
C5 O3 PG6 sing 252 n n 
C5 H51 PG6 sing 253 n n 
C5 H52 PG6 sing 254 n n 
O3 C6 PG6 sing 255 n n 
C6 C7 PG6 sing 256 n n 
C6 H61 PG6 sing 257 n n 
C6 H62 PG6 sing 258 n n 
C7 O4 PG6 sing 259 n n 
C7 H71 PG6 sing 260 n n 
C7 H72 PG6 sing 261 n n 
O4 C8 PG6 sing 262 n n 
C8 C9 PG6 sing 263 n n 
C8 H81 PG6 sing 264 n n 
C8 H82 PG6 sing 265 n n 
C9 O5 PG6 sing 266 n n 
C9 H91 PG6 sing 267 n n 
C9 H92 PG6 sing 268 n n 
O5 C10 PG6 sing 269 n n 
C10 C11 PG6 sing 270 n n 
C10 H101 PG6 sing 271 n n 
C10 H102 PG6 sing 272 n n 
C11 O6 PG6 sing 273 n n 
C11 H111 PG6 sing 274 n n 
C11 H112 PG6 sing 275 n n 
O6 C12 PG6 sing 276 n n 
C12 H121 PG6 sing 277 n n 
C12 H122 PG6 sing 278 n n 
C12 H123 PG6 sing 279 n n 
#
_atom_sites.entry_id                     7NB4 
_atom_sites.fract_transf_matrix[1][1]    0.025164 
_atom_sites.fract_transf_matrix[1][2]    0.014529 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.029057 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003046 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 U6Q A 1 401 401 U6Q UNL . 
C 3 MG A 1 402 1 MG MG . 
D 4 PG6 A 1 403 2 PG6 12P . 
E 5 HOH A 1 501 52 HOH HOH . 
E 5 HOH A 2 502 23 HOH HOH . 
E 5 HOH A 3 503 4 HOH HOH . 
E 5 HOH A 4 504 51 HOH HOH . 
E 5 HOH A 5 505 60 HOH HOH . 
E 5 HOH A 6 506 64 HOH HOH . 
E 5 HOH A 7 507 26 HOH HOH . 
E 5 HOH A 8 508 56 HOH HOH . 
E 5 HOH A 9 509 24 HOH HOH . 
E 5 HOH A 10 510 19 HOH HOH . 
E 5 HOH A 11 511 46 HOH HOH . 
E 5 HOH A 12 512 30 HOH HOH . 
E 5 HOH A 13 513 6 HOH HOH . 
E 5 HOH A 14 514 55 HOH HOH . 
E 5 HOH A 15 515 11 HOH HOH . 
E 5 HOH A 16 516 31 HOH HOH . 
E 5 HOH A 17 517 41 HOH HOH . 
E 5 HOH A 18 518 22 HOH HOH . 
E 5 HOH A 19 519 15 HOH HOH . 
E 5 HOH A 20 520 39 HOH HOH . 
E 5 HOH A 21 521 54 HOH HOH . 
E 5 HOH A 22 522 13 HOH HOH . 
E 5 HOH A 23 523 25 HOH HOH . 
E 5 HOH A 24 524 8 HOH HOH . 
E 5 HOH A 25 525 49 HOH HOH . 
E 5 HOH A 26 526 29 HOH HOH . 
E 5 HOH A 27 527 36 HOH HOH . 
E 5 HOH A 28 528 59 HOH HOH . 
E 5 HOH A 29 529 27 HOH HOH . 
E 5 HOH A 30 530 9 HOH HOH . 
E 5 HOH A 31 531 5 HOH HOH . 
E 5 HOH A 32 532 1 HOH HOH . 
E 5 HOH A 33 533 58 HOH HOH . 
E 5 HOH A 34 534 38 HOH HOH . 
E 5 HOH A 35 535 50 HOH HOH . 
E 5 HOH A 36 536 16 HOH HOH . 
E 5 HOH A 37 537 35 HOH HOH . 
E 5 HOH A 38 538 28 HOH HOH . 
E 5 HOH A 39 539 45 HOH HOH . 
E 5 HOH A 40 540 20 HOH HOH . 
E 5 HOH A 41 541 17 HOH HOH . 
E 5 HOH A 42 542 43 HOH HOH . 
E 5 HOH A 43 543 34 HOH HOH . 
E 5 HOH A 44 544 10 HOH HOH . 
E 5 HOH A 45 545 21 HOH HOH . 
E 5 HOH A 46 546 37 HOH HOH . 
E 5 HOH A 47 547 18 HOH HOH . 
E 5 HOH A 48 548 14 HOH HOH . 
E 5 HOH A 49 549 2 HOH HOH . 
E 5 HOH A 50 550 57 HOH HOH . 
E 5 HOH A 51 551 3 HOH HOH . 
E 5 HOH A 52 552 7 HOH HOH . 
E 5 HOH A 53 553 12 HOH HOH . 
E 5 HOH A 54 554 48 HOH HOH . 
E 5 HOH A 55 555 33 HOH HOH . 
E 5 HOH A 56 556 53 HOH HOH . 
E 5 HOH A 57 557 65 HOH HOH . 
E 5 HOH A 58 558 44 HOH HOH . 
E 5 HOH A 59 559 47 HOH HOH . 
E 5 HOH A 60 560 62 HOH HOH . 
E 5 HOH A 61 561 63 HOH HOH . 
E 5 HOH A 62 562 40 HOH HOH . 
E 5 HOH A 63 563 32 HOH HOH . 
E 5 HOH A 64 564 42 HOH HOH . 
E 5 HOH A 65 565 66 HOH HOH . 
E 5 HOH A 66 566 61 HOH HOH . 
E 5 HOH A 67 567 67 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PG6 . . . D 4 -9.145 2.316 -0.078 0.5 56.66 ? C1 PG6 403 A 1 
HETATM 2 O O1 PG6 . . . D 4 -7.962 2.647 -0.794 0.5 51.12 ? O1 PG6 403 A 1 
HETATM 3 C C2 PG6 . . . D 4 -7.762 1.819 -1.94 0.5 53.44 ? C2 PG6 403 A 1 
HETATM 4 C C3 PG6 . . . D 4 -6.461 2.173 -2.615 0.5 48.52 ? C3 PG6 403 A 1 
HETATM 5 O O2 PG6 . . . D 4 -5.808 0.996 -3.069 0.5 42.61 ? O2 PG6 403 A 1 
HETATM 6 C C4 PG6 . . . D 4 -4.395 1.072 -2.983 0.5 38.01 ? C4 PG6 403 A 1 
HETATM 7 C C5 PG6 . . . D 4 -3.987 1.278 -1.567 0.5 35.57 ? C5 PG6 403 A 1 
HETATM 8 O O3 PG6 . . . D 4 -3.406 0.099 -1.029 0.5 37.9 ? O3 PG6 403 A 1 
HETATM 9 C C6 PG6 . . . D 4 -2.765 0.336 0.22 0.5 39.97 ? C6 PG6 403 A 1 
HETATM 10 C C7 PG6 . . . D 4 -2.704 -0.921 1.015 0.5 40.02 ? C7 PG6 403 A 1 
HETATM 11 O O4 PG6 . . . D 4 -3.353 -0.731 2.256 0.5 41.76 ? O4 PG6 403 A 1 
HETATM 12 C C8 PG6 . . . D 4 -4.723 -1.116 2.251 0.5 41.78 ? C8 PG6 403 A 1 
HETATM 13 C C9 PG6 . . . D 4 -5.426 -0.411 3.36 0.5 49.23 ? C9 PG6 403 A 1 
HETATM 14 O O5 PG6 . . . D 4 -6.803 -0.24 3.045 0.5 54.31 ? O5 PG6 403 A 1 
HETATM 15 C C10 PG6 . . . D 4 -7.436 -1.486 2.749 0.5 60.43 ? C10 PG6 403 A 1 
HETATM 16 C C11 PG6 . . . D 4 -8.405 -1.308 1.617 0.5 61.51 ? C11 PG6 403 A 1 
HETATM 17 O O6 PG6 . . . D 4 -9.731 -1.25 2.138 0.5 56.61 ? O6 PG6 403 A 1 
HETATM 18 C C12 PG6 . . . D 4 -10.708 -1.051 1.126 0.5 54.1 ? C12 PG6 403 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           18 
#